Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 9.6e-101 370.2 187 100.0
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 3.4e-98 361.7 187 96.8
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 1.5e-74 283.1 189 74.6
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 3.8e-65 251.9 187 69.0
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 1.1e-56 223.8 188 64.4
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 2.1e-55 219.5 176 68.8
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 1.8e-54 216.5 187 66.3
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 3.0e-54 215.7 190 63.2
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 8.8e-54 214.2 190 62.6
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 2.0e-53 213.0 188 63.3
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 1.7e-52 209.9 183 63.9
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 4.8e-52 208.4 186 62.9
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.4e-51 206.1 190 61.6
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 3.1e-51 205.7 193 60.6
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 5.4e-51 204.9 156 67.3
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 1.6e-50 203.4 195 60.5
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 2.7e-50 202.6 194 61.3
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 5.0e-49 198.4 188 58.0
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 7.2e-48 194.5 190 59.5
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.2e-47 193.7 190 58.9
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 1.6e-47 193.4 194 56.2
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 2.7e-47 192.6 192 56.8
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 2.7e-47 192.6 156 67.3
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 1.2e-45 187.2 191 56.0
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 3.4e-45 185.7 130 68.5
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.3e-44 183.7 190 56.8
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.7e-44 183.3 186 59.7
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 3.7e-44 182.2 195 55.9
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 6.3e-44 181.4 194 56.2
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 1.1e-43 180.6 189 56.1
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 5.4e-43 178.3 190 54.7
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 1.3e-41 173.7 190 54.7
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 2.3e-41 172.9 184 54.9
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 6.6e-41 171.4 201 48.3
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 6.6e-41 171.4 184 54.3
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 2.5e-40 169.5 188 54.8
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 3.3e-40 169.1 188 53.7
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 5.6e-40 168.3 184 54.3
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.6e-39 166.8 190 53.2
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 2.1e-39 166.4 194 52.6
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.8e-39 166.0 190 54.2
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 3.6e-39 165.6 191 53.9
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 1.8e-38 163.3 188 54.8
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 2.3e-38 162.9 136 69.9
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 5.2e-38 161.8 188 56.4
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 5.2e-38 161.8 188 56.4
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 8.9e-38 161.0 197 51.3
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 1.2e-37 160.6 189 52.4
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 2.0e-37 159.8 122 69.7
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 5.7e-37 158.3 139 66.2
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 9.8e-37 157.5 125 70.4
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 4.9e-36 155.2 125 68.8
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 6.4e-36 154.8 189 51.9
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 3.5e-34 149.1 190 51.1
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 5.9e-34 148.3 188 51.6
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 7.8e-34 147.9 184 50.5
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.0e-33 146.0 184 50.0
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 6.6e-33 144.8 188 50.5
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 2.5e-32 142.9 199 48.7
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 7.3e-32 141.4 134 60.4
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 7.3e-32 141.4 186 47.3
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 9.5e-32 141.0 186 49.5
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 1.2e-31 140.6 194 47.4
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.6e-31 140.2 168 53.0
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 1.6e-31 140.2 168 53.0
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 2.1e-31 139.8 186 48.4
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 3.6e-31 139.0 195 47.2
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 4.7e-31 138.7 188 48.9
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 6.2e-31 138.3 189 49.2
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 1.0e-30 137.5 199 48.2
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 1.0e-30 137.5 190 48.4
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 4.0e-30 135.6 187 48.7
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 5.2e-30 135.2 193 49.2
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.2e-29 134.0 128 63.3
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 1.2e-29 134.0 181 50.3
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 1.5e-29 133.7 194 48.5
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 7.5e-29 131.3 188 46.8
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 7.5e-29 131.3 170 51.8
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 1.3e-28 130.6 163 50.3
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 2.2e-28 129.8 188 46.8
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 3.7e-28 129.0 170 50.6
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 3.7e-28 129.0 175 49.7
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 6.4e-28 128.3 188 46.8
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 1.4e-27 127.1 170 50.0
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 2.4e-27 126.3 186 44.6
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 2.4e-27 126.3 148 54.7
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 4.1e-27 125.6 169 49.7
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 2.7e-26 122.9 190 45.8
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 7.8e-26 121.3 194 44.3
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 1.3e-25 120.6 174 46.0
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 1.7e-25 120.2 185 45.9
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 3.0e-25 119.4 127 58.3
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 1.1e-24 117.5 186 45.2
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 9.5e-24 114.4 155 49.7
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 2.1e-23 113.2 140 52.9
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 4.0e-22 109.0 186 42.5
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 9.8e-21 104.4 150 48.7
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 2.9e-20 102.8 140 50.0
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 4.9e-20 102.1 186 41.4
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 2.4e-19 99.8 101 60.4
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 3.9e-17 92.4 127 48.0
BraA10t43560Z Brassica rapa HOM05D007139 ORTHO05D009171 1.8e-14 83.6 53 73.6
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 6.4e-12 75.1 88 53.4
CBR_g22376 Chara braunii HOM05D007139 ORTHO05D009171 1.6e-10 70.5 135 40.0
Sp6g19070 Schrenkiella parvula HOM05D007139 ORTHO05D009171 1.5e-08 63.9 192 32.3
AUR62033718 Chenopodium quinoa HOM05D007139 ORTHO05D138182 1.6e-07 60.5 33 93.9
AagrBONN_evm.TU.Sc2ySwM_344.2913 Anthoceros agrestis HOM05D007139 ORTHO05D009171 2.8e-07 59.7 139 40.3
Haze_21949 Corylus avellana HOM05D007139 ORTHO05D009171 4.7e-07 58.9 81 42.0


User provided reference genes

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