Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 2.2e-255 885.2 457 100.0
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 8.1e-218 760.4 402 97.8
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 1.0e-167 594.0 440 73.6
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 2.5e-150 536.2 470 62.8
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 9.4e-150 534.3 421 70.1
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 8.2e-146 521.2 422 66.4
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 1.1e-145 520.8 423 66.7
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 2.9e-143 512.7 462 61.3
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 6.5e-143 511.5 420 65.5
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 8.5e-143 511.1 393 67.7
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 1.1e-142 510.8 416 65.9
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 2.5e-142 509.6 421 64.6
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 2.5e-142 509.6 431 66.1
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.2e-141 507.3 418 66.7
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 2.1e-141 506.5 419 64.9
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 2.7e-141 506.1 418 66.5
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 3.6e-141 505.8 460 60.2
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 3.6e-141 505.8 423 65.5
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 4.0e-140 502.3 424 65.8
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 5.2e-140 501.9 424 64.6
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 6.8e-140 501.5 415 63.6
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 1.2e-139 500.7 472 59.5
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 1.5e-139 500.4 412 65.5
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 2.0e-139 500.0 415 64.8
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 3.4e-139 499.2 448 60.9
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 5.7e-139 498.4 430 63.3
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 7.5e-139 498.0 424 62.7
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 9.8e-139 497.7 415 65.3
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 1.3e-138 497.3 462 60.4
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 2.8e-138 496.1 430 62.8
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 3.7e-138 495.7 471 60.1
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 8.3e-138 494.6 413 65.4
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 1.1e-137 494.2 396 67.2
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.4e-137 493.8 418 64.8
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 2.4e-137 493.0 425 64.2
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 7.0e-137 491.5 415 63.9
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 1.6e-136 490.3 415 63.9
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 2.7e-136 489.6 463 57.9
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 7.7e-136 488.0 418 63.9
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 1.3e-135 487.3 416 63.7
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 1.3e-135 487.3 426 62.2
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 2.3e-135 486.5 414 62.8
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 3.8e-135 485.7 419 61.8
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 8.6e-135 484.6 439 61.3
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 8.6e-135 484.6 441 59.6
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 8.6e-135 484.6 411 63.5
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 1.5e-134 483.8 417 63.3
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 1.5e-134 483.8 423 62.4
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 2.5e-134 483.0 419 61.6
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 9.5e-134 481.1 442 59.7
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.2e-133 480.7 467 57.8
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 8.0e-133 478.0 476 60.1
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 1.8e-132 476.9 415 61.2
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 5.2e-132 475.3 413 61.3
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 8.8e-132 474.6 416 62.7
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 1.2e-131 474.2 418 61.0
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 3.4e-131 472.6 419 61.1
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 5.7e-131 471.9 423 63.4
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 3.7e-130 469.2 423 60.3
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 8.3e-130 468.0 422 60.0
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 8.3e-130 468.0 412 62.4
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 4.1e-129 465.7 418 61.0
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 7.0e-129 464.9 424 61.6
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 9.2e-129 464.5 428 59.8
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 2.0e-128 463.4 408 60.0
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.0e-128 463.4 403 62.3
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 5.0e-127 458.8 442 57.5
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 1.9e-126 456.8 401 61.8
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 2.5e-126 456.4 419 59.2
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 2.8e-125 453.0 413 59.8
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 1.0e-124 451.1 411 59.6
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 3.0e-124 449.5 419 58.5
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 5.2e-124 448.7 414 60.1
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 2.0e-123 446.8 414 60.1
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 9.8e-123 444.5 414 59.2
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 1.3e-122 444.1 418 58.9
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 1.7e-122 443.7 414 59.2
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 1.6e-120 437.2 412 58.3
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 4.6e-120 435.6 386 59.6
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 1.0e-119 434.5 414 58.2
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 7.3e-118 428.3 404 57.7
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 9.8e-115 417.9 344 66.0
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 7.0e-113 411.8 421 56.1
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 1.9e-110 403.7 364 61.8
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 9.9e-107 391.3 229 86.0
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 1.1e-100 371.3 248 76.2
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 4.7e-93 345.9 248 69.8
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 1.3e-90 337.8 319 58.9
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 4.9e-90 335.9 305 59.0
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 1.3e-87 327.8 308 55.5
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 4.8e-85 319.3 480 40.4
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 1.4e-84 317.8 334 53.3
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 3.1e-84 316.6 284 61.3
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 2.2e-82 310.5 330 52.4
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 8.4e-82 308.5 493 40.0
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 2.0e-75 287.3 198 73.7
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 5.8e-75 285.8 222 69.4
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 3.2e-73 280.0 189 75.1
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 7.1e-73 278.9 184 76.1
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 3.3e-70 270.0 274 55.1
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 7.4e-62 242.3 287 49.1
Peaxi162Scf00067g01819 Petunia axillaris HOM05D002567 ORTHO05D007435 5.9e-51 206.1 224 51.8
Solyc09g074750.3 Solanum lycopersicum HOM05D002567 ORTHO05D007435 1.7e-50 204.5 231 50.2
Atru.chr5.1230 Acer truncatum HOM05D002567 ORTHO05D007435 7.4e-46 189.1 214 53.3
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 5.2e-31 139.8 98 68.4
Cfa024758 Carpinus fangiana HOM05D002567 ORTHO05D007435 3.5e-27 127.1 234 33.8
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea HOM05D002567 ORTHO05D007435 1.0e-26 125.6 330 35.8
PRCOL_00000973 Prasinoderma coloniale HOM05D002567 ORTHO05D007435 1.6e-24 118.2 231 34.2
CAN.G312.11 Capsicum annuum HOM05D000586 ORTHO05D003356 8.0e-24 115.9 74 74.3
MCO08G095 Micromonas commoda HOM05D002567 ORTHO05D007435 1.8e-23 114.8 269 30.5
arahy.Tifrunner.gnm1.ann1.5I5ID6 Arachis hypogaea HOM05D002567 ORTHO05D007435 6.8e-23 112.8 69 79.7
arahy.Tifrunner.gnm1.ann1.L0WASJ Arachis hypogaea HOM05D002567 ORTHO05D007435 6.8e-23 112.8 69 79.7
DCAR_017872 Daucus carota HOM05D002567 ORTHO05D007435 3.4e-22 110.5 77 70.1
Nitab4.5_0011064g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 3.4e-22 110.5 108 57.4
Duzib133G1109 Durio zibethinus HOM05D002567 ORTHO05D007435 4.5e-19 100.1 98 52.0
Ciclev10006598m.g Citrus clementina HOM05D002567 ORTHO05D007435 1.7e-18 98.2 63 81.0
Duzib133G0811 Durio zibethinus HOM05D002567 ORTHO05D007435 1.5e-17 95.1 98 50.0
CAN.G2.56 Capsicum annuum HOM05D000586 ORTHO05D003356 2.1e-16 91.3 97 51.5
Actinidia21062 Actinidia chinensis HOM05D002567 ORTHO05D007435 6.8e-15 86.3 61 73.8
Nitab4.5_0005578g0030 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.0e-14 84.7 84 52.4
Oeu011429.1 Olea europaea HOM05D002567 ORTHO05D007435 1.1e-12 79.0 48 77.1
EL10Ac7g17491 Beta vulgaris HOM05D002567 ORTHO05D007435 2.4e-12 77.8 42 85.7
AUR62042552 Chenopodium quinoa HOM05D004615 ORTHO05D000004 4.5e-11 73.6 40 80.0
AUR62043266 Chenopodium quinoa HOM05D003402 ORTHO05D003939 7.8e-11 72.8 44 86.4
AUR62040423 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.6e-10 69.7 35 85.7
Sopen09g029580 Solanum pennellii HOM05D002567 ORTHO05D007435 7.3e-09 66.2 47 68.1
Nitab4.5_0001151g0150 Nicotiana tabacum HOM05D001632 ORTHO05D001534 6.1e-08 63.2 223 29.1
Aa31LG4G1490 Aethionema arabicum HOM05D000870 ORTHO05D000715 6.8e-07 59.7 309 23.6
Lsat_1_v5_gn_5_86321 Lactuca sativa HOM05D000295 ORTHO05D001778 2.0e-06 58.2 36 77.8
CARHR220570 Cardamine hirsuta HOM05D002567 ORTHO05D007435 2.6e-06 57.8 90 42.2
Ciclev10028602m.g Citrus clementina HOM05D001632 ORTHO05D001534 7.5e-06 56.2 148 29.1


User provided reference genes

Program Settings