Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.5e-278 962.2 484 100.0
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 5.3e-236 820.8 502 85.3
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 2.2e-133 479.9 434 59.9
EL10Ac7g17490 Beta vulgaris HOM05D007164 ORTHO05D008802 1.1e-84 318.2 343 54.5
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 4.7e-83 312.8 519 40.3
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 7.3e-52 209.1 498 35.3
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 4.8e-51 206.5 527 34.3
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 1.8e-50 204.5 490 34.3
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 6.9e-50 202.6 571 33.6
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 2.2e-48 197.6 456 34.0
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 2.9e-48 197.2 518 34.2
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 3.8e-48 196.8 500 34.2
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 4.2e-47 193.4 502 35.3
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 1.6e-43 181.4 586 31.9
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 3.7e-43 180.3 529 31.6
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 4.0e-42 176.8 499 33.5
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 2.6e-41 174.1 448 34.2
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 3.4e-41 173.7 531 33.7
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 5.8e-41 172.9 526 35.2
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 1.7e-40 171.4 261 44.4
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 4.9e-40 169.9 555 31.5
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 1.4e-39 168.3 522 31.8
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 1.9e-39 167.9 515 30.7
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 1.9e-39 167.9 491 33.2
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 1.2e-38 165.2 492 32.1
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 2.1e-38 164.5 236 42.4
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 3.0e-37 160.6 248 41.1
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.9e-37 160.2 230 44.8
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 1.1e-36 158.7 248 40.3
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 1.5e-36 158.3 507 32.5
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 1.9e-36 157.9 471 32.5
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.9e-36 157.9 513 32.0
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.3e-36 157.1 521 30.9
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 4.8e-35 153.3 489 31.3
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 2.4e-34 151.0 511 30.5
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 4.0e-34 150.2 376 33.2
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 4.0e-34 150.2 245 40.4
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 9.0e-34 149.1 269 36.8
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.5e-33 148.3 258 38.0
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 2.0e-33 147.9 254 40.2
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 3.4e-33 147.1 402 31.3
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 5.8e-33 146.4 246 38.2
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 1.0e-32 145.6 522 29.7
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 1.3e-32 145.2 256 38.3
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 2.9e-32 144.1 248 39.5
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 1.4e-31 141.7 465 29.5
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 3.2e-31 140.6 486 29.8
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 2.7e-30 137.5 365 32.3
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 3.5e-30 137.1 453 29.8
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.3e-29 135.2 244 39.3
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 3.0e-29 134.0 469 30.3
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 1.1e-28 132.1 270 36.3
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 1.9e-28 131.3 400 30.8
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 4.3e-28 130.2 499 30.5
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 5.7e-28 129.8 246 37.8
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 1.6e-27 128.3 305 36.4
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 2.2e-27 127.9 496 26.8
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 1.8e-26 124.8 263 34.2
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 5.3e-26 123.2 263 34.2
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 1.2e-25 122.1 203 36.9
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 1.2e-25 122.1 229 38.0
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 3.4e-25 120.6 410 31.0
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 5.9e-25 119.8 247 33.6
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 5.9e-25 119.8 262 33.6
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 5.9e-25 119.8 221 38.0
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 7.7e-25 119.4 508 28.5
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 7.7e-25 119.4 164 41.5
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 2.2e-24 117.9 361 29.6
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 2.9e-24 117.5 215 35.8
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 2.9e-24 117.5 213 32.9
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 6.5e-24 116.3 499 26.3
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 8.5e-24 115.9 162 42.0
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 8.5e-24 115.9 300 33.3
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 1.9e-23 114.8 497 25.4
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 4.2e-23 113.6 450 27.8
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 5.5e-23 113.2 269 33.1
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 5.5e-23 113.2 262 29.4
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 2.1e-22 111.3 458 29.7
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 1.0e-21 109.0 265 34.3
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 3.0e-21 107.5 505 25.3
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 1.5e-20 105.1 510 24.1
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 2.0e-20 104.8 453 27.8
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 2.5e-20 104.4 325 29.2
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 5.7e-20 103.2 192 35.9
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 2.8e-19 100.9 93 51.6
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 5.5e-15 86.7 173 34.1
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 5.5e-15 86.7 192 34.9
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 2.7e-14 84.3 472 25.4
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 3.6e-14 84.0 195 35.4
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 7.9e-14 82.8 470 25.3
Peaxi162Scf00067g02422 Petunia axillaris HOM05D007164 ORTHO05D008802 1.0e-13 82.4 393 27.2
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 1.0e-13 82.4 94 39.4
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 6.7e-13 79.7 271 33.9
MELO3C019559.2 Cucumis melo HOM05D007164 ORTHO05D008802 2.6e-12 77.8 184 33.2
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.7e-11 75.1 190 26.3
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 1.4e-10 72.0 254 26.8
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 5.3e-10 70.1 190 27.9
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 5.3e-10 70.1 87 42.5
Mapoly0046s0035 Marchantia polymorpha HOM05D007164 ORTHO05D008802 8.0e-06 56.2 215 21.9


User provided reference genes

Program Settings