Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 3.4e-50 201.4 106 100.0
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 6.3e-49 197.2 106 96.2
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 5.9e-39 164.1 104 80.8
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 7.8e-39 163.7 106 79.2
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 9.5e-37 156.8 106 76.4
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 6.1e-36 154.1 106 74.5
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 1.8e-35 152.5 105 72.4
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 2.3e-35 152.1 105 71.4
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 5.2e-35 151.0 106 73.6
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 1.5e-34 149.4 106 73.6
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 2.0e-34 149.1 104 74.0
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 2.0e-34 149.1 102 72.5
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 2.0e-34 149.1 102 71.6
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.4e-34 147.9 106 69.8
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 9.8e-34 146.7 103 72.8
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 9.8e-34 146.7 104 72.1
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 1.7e-33 146.0 105 70.5
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-33 145.6 104 69.2
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 2.2e-33 145.6 106 69.8
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.9e-33 145.2 105 71.4
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.7e-33 144.8 105 73.3
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 6.4e-33 144.1 105 69.5
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 6.4e-33 144.1 105 70.5
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 8.3e-33 143.7 106 69.8
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.3e-33 143.7 103 69.9
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.4e-32 142.9 104 68.3
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.8e-32 142.5 100 73.0
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 3.2e-32 141.7 102 70.6
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 3.2e-32 141.7 99 72.7
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.2e-32 141.7 99 72.7
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.2e-32 141.7 99 72.7
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 4.1e-32 141.4 98 71.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 68.6
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 67.6
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 67.6
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 67.6
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 5.4e-32 141.0 105 67.6
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 5.4e-32 141.0 104 68.3
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 7.0e-32 140.6 103 67.0
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 7.0e-32 140.6 106 67.9
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 7.0e-32 140.6 102 69.6
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 9.2e-32 140.2 103 68.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 9.2e-32 140.2 99 71.7
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.2e-31 139.8 105 68.6
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.2e-31 139.8 103 68.9
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-31 139.8 99 71.7
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.2e-31 139.8 104 70.2
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.2e-31 139.8 104 68.3
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 2.0e-31 139.0 105 66.7
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 2.0e-31 139.0 105 66.7
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 2.0e-31 139.0 106 68.9
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 3.5e-31 138.3 104 68.3
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 4.6e-31 137.9 107 68.2
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 5.9e-31 137.5 105 66.7
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 68.6
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 65.7
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 5.9e-31 137.5 102 69.6
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 5.9e-31 137.5 104 65.4
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 7.8e-31 137.1 106 67.9
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 1.0e-30 136.7 107 66.4
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.3e-30 136.3 102 69.6
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 1.3e-30 136.3 107 68.2
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.3e-30 136.3 105 65.7
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 1.7e-30 136.0 102 68.6
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 2.3e-30 135.6 102 67.6
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.3e-30 135.6 102 66.7
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 3.0e-30 135.2 105 65.7
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 3.0e-30 135.2 102 67.6
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 3.0e-30 135.2 101 67.3
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 3.9e-30 134.8 102 69.6
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 5.0e-30 134.4 102 66.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.0e-30 134.4 105 64.8
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 5.0e-30 134.4 107 66.4
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 5.0e-30 134.4 102 66.7
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 6.6e-30 134.0 102 63.7
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 1.1e-29 133.3 102 67.6
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 1.1e-29 133.3 102 67.6
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 1.5e-29 132.9 101 66.3
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.5e-29 132.9 102 67.6
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 1.5e-29 132.9 107 65.4
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.9e-29 132.5 103 66.0
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.9e-29 132.5 103 66.0
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 1.9e-29 132.5 105 67.6
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.9e-29 132.5 100 68.0
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 3.3e-29 131.7 106 64.2
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 3.3e-29 131.7 107 64.5
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 4.3e-29 131.3 102 66.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.2e-28 129.8 107 65.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 8.0e-28 127.1 106 59.4
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.0e-27 126.7 102 64.7
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.4e-27 126.3 100 65.0
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 2.3e-27 125.6 107 60.7
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 3.1e-27 125.2 105 60.0
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 2.0e-26 122.5 102 62.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 3.4e-26 121.7 118 59.3
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 4.4e-26 121.3 80 76.2
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 5.8e-26 120.9 191 42.4
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 7.5e-26 120.6 107 61.7
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 1.3e-25 119.8 107 60.7
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 8.3e-25 117.1 98 60.2
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 1.2e-23 113.2 85 68.2
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.2e-23 113.2 103 61.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 1.6e-23 112.8 105 56.2
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 3.5e-23 111.7 80 71.2
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 7.8e-23 110.5 80 70.0
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 8.6e-22 107.1 155 46.5
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 1.2e-20 103.2 78 66.7
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.1e-20 102.4 81 64.2
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 2.8e-20 102.1 76 68.4
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 6.2e-20 100.9 79 67.1
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 6.2e-20 100.9 79 65.8
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 1.1e-19 100.1 85 61.2
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.4e-19 99.8 74 68.9
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 5.2e-19 97.8 100 53.0
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 8.9e-19 97.1 100 52.0
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 3.4e-18 95.1 179 35.8
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 8.3e-17 90.5 79 62.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 8.3e-17 90.5 101 45.5
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 2.1e-15 85.9 102 43.1
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 3.5e-15 85.1 74 58.1
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 1.9e-13 79.3 100 42.0
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 9.5e-13 77.0 72 55.6
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 9.5e-13 77.0 72 55.6
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 1.2e-12 76.6 54 70.4
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.9e-08 62.8 79 40.5
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 3.5e-07 58.5 50 56.0
MCO07G465 Micromonas commoda HOM05D002674 ORTHO05D008041 3.0e-06 55.5 94 33.0
Cre07.g332150 Chlamydomonas reinhardtii HOM05D002674 ORTHO05D008041 3.9e-06 55.1 80 32.5


User provided reference genes

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