Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.0e-98 362.5 189 100.0
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 2.4e-75 285.8 224 73.7
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.8e-73 278.5 146 98.6
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 5.4e-67 258.1 217 68.2
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.3e-65 252.7 221 66.5
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.1e-54 217.2 212 60.8
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 4.4e-45 185.3 216 56.5
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 4.4e-45 185.3 213 58.7
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 9.9e-45 184.1 210 57.1
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 9.9e-45 184.1 215 57.7
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 1.7e-44 183.3 212 56.1
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 2.2e-44 183.0 228 57.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.2e-44 183.0 210 57.1
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 3.8e-44 182.2 216 57.4
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 3.8e-44 182.2 210 57.1
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 4.9e-44 181.8 213 57.3
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 8.4e-44 181.0 216 55.6
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-43 180.6 212 58.0
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.4e-43 180.3 211 56.9
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 2.4e-43 179.5 219 55.3
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 3.2e-43 179.1 227 52.9
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 4.2e-43 178.7 209 56.5
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 4.2e-43 178.7 217 54.4
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 5.4e-43 178.3 209 56.5
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 2.7e-42 176.0 235 52.8
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 6.0e-42 174.9 221 57.0
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 7.8e-42 174.5 213 55.4
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.0e-41 174.1 217 56.2
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 1.7e-41 173.3 227 55.1
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 8.7e-41 171.0 232 53.4
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 1.1e-40 170.6 232 51.3
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 1.9e-40 169.9 222 51.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.5e-40 169.5 213 53.1
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 2.5e-40 169.5 205 56.6
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.5e-40 169.5 226 54.4
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 9.6e-40 167.5 221 51.1
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 2.1e-39 166.4 227 51.5
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 2.1e-39 166.4 223 53.4
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 2.1e-39 166.4 189 56.1
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 2.1e-39 166.4 227 52.9
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.1e-39 166.4 227 55.1
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 2.8e-39 166.0 217 54.8
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 6.2e-39 164.9 222 53.2
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 8.1e-39 164.5 208 53.8
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 8.1e-39 164.5 220 51.4
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.4e-38 163.7 223 54.7
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.8e-38 163.3 223 54.3
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.8e-38 163.3 223 54.3
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 2.4e-38 162.9 223 54.3
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 5.3e-38 161.8 223 53.8
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 5.3e-38 161.8 224 53.6
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 3.4e-37 159.1 225 52.9
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 3.4e-37 159.1 232 50.4
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 4.4e-37 158.7 216 54.2
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 4.4e-37 158.7 220 51.4
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 9.9e-37 157.5 229 51.5
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.2e-36 156.4 221 52.5
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 3.8e-36 155.6 225 52.4
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.4e-35 153.7 220 51.4
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 1.9e-35 153.3 215 51.2
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 5.4e-35 151.8 222 52.7
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 5.4e-35 151.8 224 51.8
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 7.1e-35 151.4 229 51.5
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 9.3e-35 151.0 216 51.4
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 4.6e-34 148.7 191 53.4
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 4.6e-34 148.7 204 52.0
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 3.9e-33 145.6 253 44.3
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.3e-32 142.5 210 48.6
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 7.3e-32 141.4 173 54.9
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.6e-31 140.2 213 50.7
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 2.8e-31 139.4 221 48.9
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 1.4e-30 137.1 196 51.5
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 1.5e-29 133.7 176 54.0
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 4.5e-29 132.1 224 50.9
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 4.5e-29 132.1 214 50.5
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 1.7e-28 130.2 218 50.5
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 2.2e-28 129.8 212 49.5
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 3.8e-28 129.0 218 49.1
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 6.4e-28 128.3 218 50.0
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 8.4e-28 127.9 217 47.9
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.4e-27 127.1 226 48.7
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.4e-27 126.3 205 49.3
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 3.2e-27 125.9 215 47.4
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 5.4e-27 125.2 205 46.3
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 9.3e-27 124.4 215 47.4
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 2.1e-26 123.2 214 47.7
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 2.7e-26 122.9 196 49.5
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 2.7e-26 122.9 215 47.0
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 4.6e-26 122.1 215 47.0
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.8e-25 120.2 233 47.2
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 2.3e-25 119.8 195 51.3
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 5.1e-25 118.6 215 46.0
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 5.1e-25 118.6 215 46.5
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 7.4e-24 114.8 170 50.0
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 7.4e-24 114.8 197 45.2
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.8e-22 110.2 177 50.8
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 2.4e-22 109.8 194 45.4
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 1.5e-21 107.1 173 46.8
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 4.5e-21 105.5 177 50.3
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 4.5e-21 105.5 201 45.3
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 4.9e-20 102.1 213 41.8
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 5.5e-19 98.6 189 46.6
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 5.5e-19 98.6 183 45.4
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 7.1e-19 98.2 257 37.0
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.6e-18 97.1 190 42.6
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 2.7e-18 96.3 192 45.3
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 2.3e-17 93.2 172 44.2
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 7.6e-13 78.2 66 62.1
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 1.0e-12 77.8 173 43.4
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.9e-12 76.3 169 41.4
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.1e-11 74.3 78 69.2
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 9.3e-11 71.2 53 66.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-10 70.1 53 64.2
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-10 70.1 53 64.2
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 2.7e-10 69.7 41 75.6
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 3.5e-10 69.3 42 78.6
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 3.5e-10 69.3 53 64.2
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 3.5e-10 69.3 53 64.2
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 1.0e-09 67.8 41 73.2
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 3.0e-09 66.2 64 59.4
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 3.0e-09 66.2 57 61.4
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 3.9e-09 65.9 154 41.6
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 5.1e-09 65.5 37 78.4
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 8.7e-09 64.7 53 64.2
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 8.7e-09 64.7 38 76.3
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 1.1e-08 64.3 37 78.4
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 9.7e-08 61.2 38 73.7


User provided reference genes

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