Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 5.2e-212 740.7 357 100.0
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 7.0e-201 703.7 357 95.2
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 2.1e-173 612.5 357 82.1
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 2.9e-170 602.1 395 73.7
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 7.1e-169 597.4 390 72.6
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 5.1e-151 538.1 392 68.1
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 1.6e-144 516.5 397 63.5
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 8.7e-143 510.8 391 62.1
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 3.7e-141 505.4 390 62.8
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 4.8e-141 505.0 391 62.4
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 3.1e-140 502.3 383 61.9
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 5.3e-140 501.5 391 62.4
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 6.9e-140 501.1 391 62.4
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 1.2e-139 500.4 386 61.9
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 5.8e-139 498.0 391 61.4
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 1.0e-138 497.3 383 61.4
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 8.4e-138 494.2 386 61.1
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.9e-137 493.0 392 59.4
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.2e-137 492.3 391 61.4
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 3.2e-137 492.3 391 60.1
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 7.1e-137 491.1 390 59.7
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 7.1e-137 491.1 389 62.2
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 9.3e-137 490.7 392 59.4
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.2e-136 490.3 421 58.7
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.2e-136 490.3 391 60.1
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.7e-136 489.2 391 60.4
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.7e-136 489.2 391 60.1
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.3e-135 486.9 392 62.0
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.3e-135 486.9 386 60.1
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.8e-135 486.5 395 60.0
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 2.3e-135 486.1 389 61.4
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 3.0e-135 485.7 390 59.5
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 1.1e-134 483.8 392 58.7
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.1e-134 483.8 389 60.9
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.5e-134 483.4 393 58.5
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 1.9e-134 483.0 397 60.5
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 2.5e-134 482.6 389 59.9
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 9.6e-134 480.7 392 59.9
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.3e-133 480.3 389 60.7
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 6.3e-133 478.0 391 58.6
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 6.3e-133 478.0 392 59.7
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 1.4e-132 476.9 386 59.3
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 1.4e-132 476.9 386 59.3
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 2.4e-132 476.1 441 54.4
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 9.0e-132 474.2 392 59.9
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.5e-131 473.4 389 59.4
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 2.0e-131 473.0 384 58.3
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.5e-131 471.9 392 58.9
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 4.5e-131 471.9 375 59.5
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.0e-130 470.7 385 58.4
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 1.7e-130 469.9 392 59.2
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.8e-130 468.8 393 59.0
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 5.0e-130 468.4 443 54.2
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 8.5e-130 467.6 393 58.0
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 8.5e-130 467.6 392 59.2
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 2.5e-129 466.1 391 59.1
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 9.3e-129 464.2 389 59.1
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.6e-128 463.4 394 57.4
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 2.1e-128 463.0 392 58.9
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 2.7e-128 462.6 391 57.5
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 2.7e-128 462.6 363 61.2
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 4.6e-128 461.8 389 57.8
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.0e-127 460.7 389 58.6
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.0e-127 460.7 387 58.4
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 8.7e-127 457.6 377 58.4
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.1e-126 457.2 393 57.8
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 3.3e-126 455.7 398 58.0
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 5.7e-126 454.9 357 61.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.3e-125 453.8 386 57.0
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 6.3e-125 451.4 367 58.6
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 8.2e-125 451.1 391 57.3
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 1.4e-124 450.3 404 56.9
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 5.3e-124 448.4 383 57.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.2e-123 447.2 392 57.9
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 6.5e-122 441.4 388 55.7
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 8.5e-122 441.0 398 55.5
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.1e-121 440.7 342 62.0
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 1.4e-121 440.3 385 54.8
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 4.2e-121 438.7 341 61.0
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 3.0e-119 432.6 390 56.7
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.0e-119 432.6 392 56.1
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 3.0e-119 432.6 387 56.1
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 2.6e-118 429.5 389 55.5
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 4.4e-118 428.7 393 55.0
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 5.7e-118 428.3 391 56.3
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 4.8e-117 425.2 391 56.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.4e-116 422.9 359 58.8
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 3.1e-116 422.5 395 54.7
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.0e-114 417.5 387 55.6
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 6.5e-114 414.8 379 55.7
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 6.5e-114 414.8 392 53.1
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.4e-113 413.7 387 55.3
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 1.4e-113 413.7 401 54.4
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 1.9e-113 413.3 380 55.3
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 7.2e-113 411.4 312 61.5
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 1.2e-112 410.6 378 53.7
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 2.7e-112 409.5 409 52.6
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.6e-112 409.1 370 54.3
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 3.0e-111 406.0 396 52.8
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 4.4e-110 402.1 420 50.2
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 8.2e-109 397.9 380 51.6
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 4.5e-107 392.1 392 52.8
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 1.0e-106 391.0 427 49.4
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.9e-106 389.4 245 73.5
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.8e-106 389.0 392 52.6
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 5.2e-103 378.6 340 55.0
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 4.9e-85 318.9 381 43.3
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 3.8e-82 309.3 270 56.7
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 6.6e-82 308.5 375 44.5
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 6.1e-80 302.0 281 54.1
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 6.1e-80 302.0 376 43.9
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.9e-77 293.1 235 60.4
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.1e-76 289.3 246 56.9
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 1.9e-73 280.4 199 63.8
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 3.6e-72 276.2 347 44.4
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 5.0e-66 255.8 222 57.2
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.9e-61 240.0 297 43.8
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.7e-56 222.6 285 43.2
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 1.9e-52 210.7 233 44.2
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.1e-51 207.2 152 59.9
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 6.0e-51 205.7 172 54.7
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 1.9e-49 200.7 353 35.1
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 5.8e-46 189.1 188 50.5
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 7.3e-41 172.2 170 54.7
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 2.9e-37 160.2 118 64.4
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 2.5e-33 147.1 169 50.9
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 4.3e-33 146.4 334 30.8
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.0e-30 137.5 345 29.6
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 7.6e-22 109.0 145 43.4
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 2.5e-20 104.0 169 37.9
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.0e-18 98.6 149 36.2
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-13 80.5 154 33.1
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-12 77.8 69 47.8
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 1.1e-07 62.0 47 72.3
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 1.2e-06 58.5 68 44.1


User provided reference genes

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