Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032977 Chenopodium quinoa HOM05D003933 ORTHO05D004746 7.3e-242 840.1 416 100.0
EL10Ac9g22955 Beta vulgaris HOM05D003933 ORTHO05D004746 1.0e-195 686.8 416 80.3
Hund08600 Selenicereus undatus HOM05D003933 ORTHO05D004746 4.2e-181 638.3 417 74.8
Solyc12g088450.3 Solanum lycopersicum HOM05D003933 ORTHO05D004746 3.1e-160 568.9 417 67.6
Nitab4.5_0000569g0090 Nicotiana tabacum HOM05D003933 ORTHO05D004746 7.7e-159 564.3 417 66.9
PGSC0003DMG402011550 Solanum tuberosum HOM05D003933 ORTHO05D004746 2.2e-158 562.8 417 67.1
COL.COLO4_08591 Corchorus olitorius HOM05D003933 ORTHO05D004746 8.5e-158 560.8 416 66.8
MD13G1004400 Malus domestica HOM05D003933 ORTHO05D004746 1.9e-157 559.7 417 65.5
CAN.G107.7 Capsicum annuum HOM05D003933 ORTHO05D004746 2.5e-157 559.3 418 66.7
Nitab4.5_0003643g0030 Nicotiana tabacum HOM05D003933 ORTHO05D004746 2.5e-157 559.3 417 66.9
DCAR_007284 Daucus carota HOM05D003933 ORTHO05D004746 5.5e-157 558.1 417 66.7
Duzib132G1110 Durio zibethinus HOM05D003933 ORTHO05D004746 5.5e-157 558.1 416 67.3
Duzib277G0001 Durio zibethinus HOM05D003933 ORTHO05D004746 9.5e-157 557.4 416 67.3
Aqoxy5G00269 Aquilegia oxysepala HOM05D003933 ORTHO05D004746 1.2e-156 557.0 417 65.0
CSS0045284 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.1e-156 554.7 418 66.0
Prupe.1G348200 Prunus persica HOM05D003933 ORTHO05D004746 8.0e-156 554.3 417 65.2
Cc11_g08880 Coffea canephora HOM05D003933 ORTHO05D004746 1.0e-155 553.9 417 67.1
RcHm_v2.0_Chr4g0446781 Rosa chinensis HOM05D003933 ORTHO05D004746 5.2e-155 551.6 418 65.6
PGR142G4240 Punica granatum HOM05D003933 ORTHO05D004746 6.8e-155 551.2 419 66.8
PSO063G7666 Papaver somniferum HOM05D003933 ORTHO05D004746 2.0e-154 549.7 418 65.6
Cfa008748 Carpinus fangiana HOM05D003933 ORTHO05D004746 2.6e-154 549.3 418 65.3
vmacro10631 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.6e-154 549.3 449 63.7
Lj6A748G52 Lonicera japonica HOM05D003933 ORTHO05D004746 7.5e-154 547.7 416 66.8
ClCG10G012050 Citrullus lanatus HOM05D003933 ORTHO05D004746 1.7e-153 546.6 417 66.9
PSO782G2797 Papaver somniferum HOM05D003933 ORTHO05D004746 1.7e-153 546.6 418 65.8
Thecc.02G159300 Theobroma cacao HOM05D003933 ORTHO05D004746 1.7e-153 546.6 416 64.2
QL05p009967 Quercus lobata HOM05D003933 ORTHO05D004746 2.2e-153 546.2 415 65.1
Potri.005G092000 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.1e-152 543.9 417 64.5
THA.LOC104800863 Tarenaya hassleriana HOM05D003933 ORTHO05D004746 1.1e-152 543.9 421 64.1
Atru.chr11.1157 Acer truncatum HOM05D003933 ORTHO05D004746 1.4e-152 543.5 417 65.2
TWI77G0671 Tripterygium wilfordii HOM05D003933 ORTHO05D004746 1.4e-152 543.5 417 64.5
Migut.L00761 Erythranthe guttata HOM05D003933 ORTHO05D004746 3.1e-152 542.3 420 64.8
Ciclev10031732m.g Citrus clementina HOM05D003933 ORTHO05D004746 4.1e-152 542.0 416 65.4
TAR629G2222 Trochodendron aralioides HOM05D003933 ORTHO05D004746 4.1e-152 542.0 417 63.8
FAN07G0849 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.4e-152 541.6 418 63.9
Gorai.013G069800 Gossypium raimondii HOM05D003933 ORTHO05D004746 1.2e-151 540.4 416 64.9
Gohir.A13G060600 Gossypium hirsutum HOM05D003933 ORTHO05D004746 1.6e-151 540.0 416 65.4
MSTRG.890 Avicennia marina HOM05D003933 ORTHO05D004746 2.7e-151 539.3 430 64.2
FvH4_4g36990 Fragaria vesca HOM05D003933 ORTHO05D004746 2.7e-151 539.3 418 63.9
Rhsim09G0099700 Rhododendron simsii HOM05D003933 ORTHO05D004746 7.7e-151 537.7 419 65.6
CSS0043425 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 1.0e-150 537.3 418 64.6
SalBow8G0218 Salvia bowleyana HOM05D003933 ORTHO05D004746 1.0e-150 537.3 416 63.5
HanXRQChr12g0377651 Helianthus annuus HOM05D003933 ORTHO05D004746 5.0e-150 535.0 417 65.2
Aa31LG3G18300 Aethionema arabicum HOM05D003933 ORTHO05D004746 6.6e-150 534.6 418 62.7
Lalb_Chr10g0094951 Lupinus albus HOM05D003933 ORTHO05D004746 6.6e-150 534.6 417 64.0
Actinidia14952 Actinidia chinensis HOM05D003933 ORTHO05D004746 8.6e-150 534.3 420 63.6
Gohir.D13G061300 Gossypium hirsutum HOM05D003933 ORTHO05D004746 8.6e-150 534.3 416 64.2
SGA_v2.0_scaffold38G15064 Striga asiatica HOM05D003933 ORTHO05D004746 2.5e-149 532.7 417 63.5
Manes.08G053300 Manihot esculenta HOM05D003933 ORTHO05D004746 7.3e-149 531.2 417 63.5
ECA234G4145 Erigeron canadensis HOM05D003933 ORTHO05D004746 2.8e-148 529.3 417 64.5
CsaV3_3G031790 Cucumis sativus L. HOM05D003933 ORTHO05D004746 3.0e-147 525.8 422 64.7
Psat6g135760 Pisum sativum HOM05D003933 ORTHO05D004746 1.2e-146 523.9 417 62.6
Sed0001276 Sechium edule HOM05D003933 ORTHO05D004746 1.2e-146 523.9 412 64.6
Eucgr.J00872 Eucalyptus grandis HOM05D003933 ORTHO05D004746 2.0e-146 523.1 421 62.0
vmacro10628 Vaccinium macrocarpon HOM05D003933 ORTHO05D004746 2.0e-146 523.1 451 60.5
Haze_11764 Corylus avellana HOM05D003933 ORTHO05D004746 7.5e-146 521.2 429 61.8
AT5G23200 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 9.8e-146 520.8 419 61.8
Thhalv10004353m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 1.3e-145 520.4 416 61.8
Manes.09G017800 Manihot esculenta HOM05D003933 ORTHO05D004746 1.7e-145 520.0 418 62.0
AL6G34400 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 2.2e-145 519.6 417 61.4
arahy.Tifrunner.gnm1.ann1.2XRJ77 Arachis hypogaea HOM05D003933 ORTHO05D004746 8.3e-145 517.7 419 63.2
CANSAT78G0638 Cannabis sativa HOM05D003933 ORTHO05D004746 8.3e-145 517.7 417 60.9
arahy.Tifrunner.gnm1.ann1.J5HH0A Arachis hypogaea HOM05D003933 ORTHO05D004746 1.1e-144 517.3 419 63.2
Duzib248G0690 Durio zibethinus HOM05D003933 ORTHO05D004746 1.4e-144 516.9 410 63.7
VMungo0251G2024 Vigna mungo HOM05D003933 ORTHO05D004746 1.8e-144 516.5 429 60.8
CARHR190340 Cardamine hirsuta HOM05D003933 ORTHO05D004746 3.2e-144 515.8 420 61.7
Lsat_1_v5_gn_4_15060 Lactuca sativa HOM05D003933 ORTHO05D004746 3.2e-144 515.8 425 62.8
Phvul.003G004900 Phaseolus vulgaris HOM05D003933 ORTHO05D004746 4.1e-144 515.4 419 61.8
Medtr1g037570 Medicago truncatula HOM05D003933 ORTHO05D004746 5.4e-144 515.0 417 62.4
TPR.G29790 Trifolium pratense HOM05D003933 ORTHO05D004746 1.2e-143 513.8 417 62.1
Carub.0006s2098 Capsella rubella HOM05D003933 ORTHO05D004746 1.6e-143 513.5 417 61.2
Sp2g23940 Schrenkiella parvula HOM05D003933 ORTHO05D004746 3.5e-143 512.3 417 60.9
C07p44350 Brassica napus HOM05D003933 ORTHO05D004746 4.6e-143 511.9 416 60.3
BolC7t44956H Brassica oleracea HOM05D003933 ORTHO05D004746 4.6e-143 511.9 416 60.3
Ca_07914_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 7.8e-143 511.1 408 62.3
MELO3C024011.2 Cucumis melo HOM05D003933 ORTHO05D004746 1.0e-142 510.8 413 63.7
Glyma.09G282800 Glycine max HOM05D003933 ORTHO05D004746 1.7e-142 510.0 419 61.6
BraA03t13757Z Brassica rapa HOM05D003933 ORTHO05D004746 8.6e-142 507.7 417 61.4
A03p46330 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-140 503.8 417 60.9
Lj2g0026122 Lotus japonicus HOM05D003933 ORTHO05D004746 1.2e-140 503.8 417 61.4
Os02g0634600 Oryza sativa ssp. japonica HOM05D003933 ORTHO05D004746 6.8e-139 498.0 423 58.6
Cpa.g.sc0.130 Carica papaya HOM05D003933 ORTHO05D004746 1.5e-138 496.9 481 54.7
Hma1.2p1_0933F.1_g238310 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.7e-135 486.1 437 58.8
Hma1.2p1_2428F.1_g321995 Hydrangea macrophylla HOM05D003933 ORTHO05D004746 2.7e-135 486.1 437 58.8
Nitab4.5_0000934g0120 Nicotiana tabacum HOM05D003933 ORTHO05D004746 4.6e-135 485.3 414 60.4
Peaxi162Scf00160g00123 Petunia axillaris HOM05D003933 ORTHO05D004746 6.0e-135 485.0 376 64.4
Peaxi162Scf00081g01011 Petunia axillaris HOM05D003933 ORTHO05D004746 1.7e-134 483.4 413 60.3
CAN.G1054.19 Capsicum annuum HOM05D003933 ORTHO05D004746 8.1e-132 474.6 411 58.9
Nitab4.5_0004707g0060 Nicotiana tabacum HOM05D003933 ORTHO05D004746 1.8e-131 473.4 403 61.0
FAN12G2057 Fragaria x ananassa HOM05D003933 ORTHO05D004746 1.5e-130 470.3 418 58.4
PGSC0003DMG400021516 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.4e-130 469.2 410 59.3
unitig_26.g10014 Utricularia gibba HOM05D003933 ORTHO05D004746 4.9e-129 465.3 408 59.6
AL6G18670 Arabidopsis lyrata HOM05D003933 ORTHO05D004746 1.1e-128 464.2 416 56.2
DCAR_030211 Daucus carota HOM05D003933 ORTHO05D004746 1.9e-128 463.4 378 61.4
Sopen04g031790 Solanum pennellii HOM05D003933 ORTHO05D004746 2.4e-128 463.0 416 58.4
Solyc04g078160.4 Solanum lycopersicum HOM05D003933 ORTHO05D004746 4.1e-128 462.2 411 58.9
ATR0618G423 Amborella trichopoda HOM05D003933 ORTHO05D004746 9.2e-128 461.1 419 56.1
Thhalv10013838m.g Eutrema salsugineum HOM05D003933 ORTHO05D004746 3.0e-126 456.1 413 55.4
CiPaw.06G061200 Carya illinoinensis HOM05D003933 ORTHO05D004746 6.6e-126 454.9 357 63.6
Lj3g0018867 Lotus japonicus HOM05D003933 ORTHO05D004746 4.3e-125 452.2 411 57.2
CANSAT11G2660 Cannabis sativa HOM05D003933 ORTHO05D004746 4.7e-124 448.7 416 54.8
Glyma.11G100000 Glycine max HOM05D003933 ORTHO05D004746 6.2e-124 448.4 413 57.6
Lj3g0001561 Lotus japonicus HOM05D003933 ORTHO05D004746 8.9e-123 444.5 411 56.2
BcaB08g37269 Brassica carinata HOM05D003933 ORTHO05D004746 3.8e-121 439.1 415 54.5
AT5G08270 Arabidopsis thaliana HOM05D003933 ORTHO05D004746 8.4e-121 438.0 412 53.9
Sabra05G0076300 Salix brachista HOM05D003933 ORTHO05D004746 9.2e-120 434.5 345 62.0
Sp6g34690 Schrenkiella parvula HOM05D003933 ORTHO05D004746 1.3e-118 430.6 392 53.6
Ca_19016_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 2.5e-117 426.4 411 54.3
Gohir.A03G165000 Gossypium hirsutum HOM05D003933 ORTHO05D004746 5.6e-117 425.2 414 53.4
arahy.Tifrunner.gnm1.ann1.E3G1QY Arachis hypogaea HOM05D003933 ORTHO05D004746 1.3e-113 414.1 409 52.8
HPP92_008573 Vanilla planifolia HOM05D003933 ORTHO05D004746 1.3e-113 414.1 340 60.3
arahy.Tifrunner.gnm1.ann1.3AB2AC Arachis hypogaea HOM05D003933 ORTHO05D004746 2.2e-113 413.3 410 52.9
VMungo1127G0010 Vigna mungo HOM05D003933 ORTHO05D004746 3.8e-113 412.5 402 54.2
Gorai.005G210900 Gossypium raimondii HOM05D003933 ORTHO05D004746 4.9e-113 412.1 414 52.7
Gohir.D02G188200 Gossypium hirsutum HOM05D003933 ORTHO05D004746 3.2e-112 409.5 414 52.4
MBI06_g23608_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.2e-112 409.5 376 55.9
Medtr4g075120 Medicago truncatula HOM05D003933 ORTHO05D004746 4.2e-112 409.1 414 52.7
Carub.0006s0715 Capsella rubella HOM05D003933 ORTHO05D004746 2.7e-111 406.4 375 54.4
Potri.005G092100 Populus trichocarpa HOM05D003933 ORTHO05D004746 1.0e-110 404.4 396 51.8
MBI06_g32507_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 5.6e-109 398.7 329 59.6
Lalb_Chr19g0139431 Lupinus albus HOM05D003933 ORTHO05D004746 1.6e-108 397.1 416 51.0
BolC9t59613H Brassica oleracea HOM05D003933 ORTHO05D004746 4.0e-107 392.5 413 50.1
C09p68670 Brassica napus HOM05D003933 ORTHO05D004746 6.9e-107 391.7 413 50.1
BraA10t44888Z Brassica rapa HOM05D003933 ORTHO05D004746 1.3e-105 387.5 413 49.4
Sopen12g030430 Solanum pennellii HOM05D003933 ORTHO05D004746 1.3e-105 387.5 252 71.8
Zm00001eb248160 Zea mays HOM05D003933 ORTHO05D004746 1.1e-104 384.4 332 56.3
A10p28410 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-103 380.9 408 49.0
GSVIVG01026245001 Vitis vinifera HOM05D003933 ORTHO05D004746 8.1e-100 368.2 419 50.1
Lj3g0003114 Lotus japonicus HOM05D003933 ORTHO05D004746 6.9e-99 365.2 369 52.3
Lj3g0021014 Lotus japonicus HOM05D003933 ORTHO05D004746 6.9e-99 365.2 369 52.3
Lj3g0017683 Lotus japonicus HOM05D003933 ORTHO05D004746 1.5e-98 364.0 369 52.0
SEGI_04055 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 7.1e-96 355.1 401 46.9
TPR.G25000 Trifolium pratense HOM05D003933 ORTHO05D004746 2.5e-93 346.7 371 50.4
CSS0006186 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 5.3e-91 339.0 264 60.6
Ca_20843_v3 Cicer arietinum L. HOM05D003933 ORTHO05D004746 1.0e-89 334.7 351 50.4
Dinv17619 Davidia involucrata HOM05D003933 ORTHO05D004746 2.9e-89 333.2 273 63.4
FAN17G2963 Fragaria x ananassa HOM05D003933 ORTHO05D004746 5.5e-88 328.9 284 57.7
Mapoly0072s0109 Marchantia polymorpha HOM05D003933 ORTHO05D004746 2.1e-87 327.0 409 43.5
Psat7g177760 Pisum sativum HOM05D003933 ORTHO05D004746 1.0e-86 324.7 352 50.9
CSS0013970 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 8.7e-86 321.6 273 56.0
Pp3c10_5850 Physcomitrium patens HOM05D003933 ORTHO05D004746 2.8e-84 316.6 414 43.0
CDE08G0738 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 3.7e-84 316.2 252 61.5
SMO364G0332 Selaginella moellendorffii HOM05D003933 ORTHO05D004746 3.7e-84 316.2 406 43.3
CSS0049411 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 6.3e-84 315.5 231 63.6
CARHR204870 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.2e-82 311.2 269 57.6
CSS0027256 Camellia sinensis var. sinensis HOM05D003933 ORTHO05D004746 2.9e-81 306.6 257 56.8
AagrBONN_evm.TU.Sc2ySwM_117.4016 Anthoceros agrestis HOM05D003933 ORTHO05D004746 6.7e-78 295.4 412 40.0
MD16G1003200 Malus domestica HOM05D003933 ORTHO05D004746 1.7e-68 264.2 376 41.8
Sed0007936 Sechium edule HOM05D003933 ORTHO05D004746 4.8e-68 262.7 293 48.8
Sc10g0005110 Simmondsia chinensis HOM05D003933 ORTHO05D004746 4.8e-68 262.7 193 65.8
PGSC0003DMG400011553 Solanum tuberosum HOM05D003933 ORTHO05D004746 3.1e-59 233.4 157 66.2
CBR_g6576 Chara braunii HOM05D003933 ORTHO05D004746 1.0e-57 228.4 463 32.8
Sc10g0005100 Simmondsia chinensis HOM05D003933 ORTHO05D004746 2.0e-42 177.6 133 69.2
Nn7g37760 Nelumbo nucifera HOM05D003933 ORTHO05D004746 2.5e-40 170.6 126 72.2
SHI31071 Sapria himalayana HOM05D003933 ORTHO05D004746 9.5e-40 168.7 376 32.7
Oeu044350.1 Olea europaea HOM05D003933 ORTHO05D004746 6.1e-39 166.0 126 68.3
MCO06G263 Micromonas commoda HOM05D003933 ORTHO05D004746 2.2e-36 157.5 330 32.1
CDE08G1244 Ceratophyllum demersum HOM05D003933 ORTHO05D004746 4.5e-34 149.8 129 62.0
COL.COLO4_20883 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.7e-33 147.9 111 62.2
Cre02.g086076 Chlamydomonas reinhardtii HOM05D003933 ORTHO05D004746 9.8e-29 132.1 499 24.2
BcaC03g18034 Brassica carinata HOM05D003933 ORTHO05D004746 6.4e-28 129.4 392 28.6
C06p10890 Brassica napus HOM05D003933 ORTHO05D004746 6.4e-28 129.4 226 35.0
C02p60970 Brassica napus HOM05D003933 ORTHO05D004746 1.2e-26 125.2 226 34.1
Dinv17620 Davidia involucrata HOM05D003933 ORTHO05D028341 1.1e-22 112.1 67 79.1
A02p41110 Brassica napus HOM05D003933 ORTHO05D004746 3.7e-20 103.6 68 63.2
MBI06_g42297_MAGBIO Magnolia biondii HOM05D003933 ORTHO05D004746 3.9e-17 93.6 99 53.5
SEGI_32331 Sequoiadendron giganteum HOM05D003933 ORTHO05D004746 1.5e-16 91.7 113 44.2
CARHR204860 Cardamine hirsuta HOM05D003933 ORTHO05D004746 1.8e-14 84.7 64 65.6
Psat7g177720 Pisum sativum HOM05D003933 ORTHO05D004746 7.1e-11 72.8 44 84.1
PGSC0003DMG401019957 Solanum tuberosum HOM05D003933 ORTHO05D004746 1.5e-08 65.1 76 47.4
COL.COLO4_20881 Corchorus olitorius HOM05D003933 ORTHO05D004746 1.2e-07 62.0 42 71.4
BolC2t12147H Brassica oleracea HOM05D003933 ORTHO05D028341 3.6e-07 60.5 37 70.3
BcaC03g13212 Brassica carinata HOM05D003933 ORTHO05D004746 1.4e-06 58.5 123 32.5


User provided reference genes

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