Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.1e-70 270.0 149 100.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 3.0e-65 251.9 141 87.2
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 3.7e-55 218.4 143 86.0
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 4.9e-55 218.0 143 74.8
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 4.0e-49 198.4 143 67.1
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 1.2e-45 186.8 143 62.2
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.0e-45 186.0 143 65.0
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 2.7e-45 185.7 143 62.2
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 4.6e-45 184.9 144 65.3
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.6e-45 184.9 141 61.7
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 6.0e-45 184.5 142 63.4
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.0e-44 183.7 146 61.0
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.0e-44 183.7 143 62.2
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.0e-44 183.7 143 62.9
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.0e-44 183.7 141 62.4
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 1.3e-44 183.3 147 64.6
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.3e-44 182.6 144 64.6
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 2.3e-44 182.6 144 64.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 3.0e-44 182.2 143 60.8
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 3.0e-44 182.2 146 63.0
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 3.9e-44 181.8 141 62.4
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 3.9e-44 181.8 141 59.6
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 3.9e-44 181.8 143 60.1
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 3.9e-44 181.8 145 62.8
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 5.0e-44 181.4 143 60.8
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.0e-44 181.4 142 61.3
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 6.6e-44 181.0 143 61.5
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 8.6e-44 180.6 145 62.1
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.9e-43 179.5 141 60.3
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.9e-43 179.5 143 61.5
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.9e-43 179.5 141 60.3
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.9e-43 179.5 143 62.9
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 3.3e-43 178.7 143 62.9
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 3.3e-43 178.7 140 61.4
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.3e-43 178.7 144 62.5
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 4.3e-43 178.3 145 58.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 4.3e-43 178.3 145 60.0
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 5.6e-43 177.9 146 61.0
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.2e-42 176.8 140 62.9
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.2e-42 176.8 144 59.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.6e-42 176.4 148 61.5
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.6e-42 176.4 144 61.1
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 2.1e-42 176.0 143 62.2
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.7e-42 174.9 147 57.8
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 4.7e-42 174.9 148 60.8
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 4.7e-42 174.9 140 60.7
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 6.2e-42 174.5 140 58.6
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 8.1e-42 174.1 148 60.8
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 8.1e-42 174.1 144 58.3
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.1e-41 173.7 143 58.0
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.8e-41 172.9 144 58.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.8e-41 172.9 143 59.4
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.8e-41 172.9 142 56.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.8e-41 172.9 144 57.6
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.3e-41 172.6 144 58.3
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 3.1e-41 172.2 146 56.2
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 3.1e-41 172.2 140 60.7
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 8.9e-41 170.6 141 56.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 8.9e-41 170.6 144 57.6
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 8.9e-41 170.6 143 60.1
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.2e-40 170.2 146 54.8
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.2e-40 170.2 142 58.5
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 1.5e-40 169.9 141 58.9
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 3.4e-40 168.7 141 59.6
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 4.4e-40 168.3 148 57.4
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 4.4e-40 168.3 141 57.4
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 5.8e-40 167.9 147 55.8
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 5.8e-40 167.9 143 58.0
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 9.9e-40 167.2 141 55.3
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 9.9e-40 167.2 146 57.5
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.7e-39 166.4 141 57.4
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.7e-39 166.4 174 50.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 2.2e-39 166.0 142 59.2
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 2.2e-39 166.0 141 55.3
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.9e-39 165.6 141 57.4
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 2.9e-39 165.6 149 53.0
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 3.7e-39 165.2 144 55.6
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 1.4e-38 163.3 146 54.1
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 3.2e-38 162.2 145 54.5
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 7.1e-38 161.0 140 55.7
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 1.9e-35 152.9 194 44.3
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 3.6e-34 148.7 146 51.4
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 7.6e-32 141.0 122 56.6
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 9.2e-30 134.0 131 50.4
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 1.5e-27 126.7 140 45.7
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 6.4e-23 111.3 150 38.7
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 4.2e-22 108.6 110 47.3
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.2e-21 107.1 78 60.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 3.5e-21 105.5 57 84.2
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 6.0e-21 104.8 136 41.9
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 9.9e-16 87.4 57 66.7
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.9e-15 85.1 97 47.4
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 5.1e-12 75.1 63 55.6
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 7.4e-11 71.2 83 47.0
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.7e-10 68.9 104 35.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 5.5e-06 55.1 86 39.5


User provided reference genes

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