Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032931 Chenopodium quinoa HOM05D008909 ORTHO05D008474 6.6e-171 604.0 312 100.0
AUR62037920 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.6e-74 283.1 326 52.5
AUR62044760 Chenopodium quinoa HOM05D008909 ORTHO05D008474 2.6e-74 283.1 326 52.5
AUR62040174 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.4e-74 282.7 300 53.3
EL10Ac9g22992 Beta vulgaris HOM05D008909 ORTHO05D008474 9.2e-72 274.6 300 54.7
EL10Ac9g22994 Beta vulgaris HOM05D008909 ORTHO05D008474 9.2e-72 274.6 301 53.2
EL10Ac9g22993 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-70 270.8 276 57.6
EL10Ac9g22996 Beta vulgaris HOM05D008909 ORTHO05D008474 8.6e-70 268.1 302 54.0
EL10Ac9g22608 Beta vulgaris HOM05D008909 ORTHO05D008474 9.5e-69 264.6 272 51.1
EL10Ac9g22995 Beta vulgaris HOM05D008909 ORTHO05D008474 7.0e-64 248.4 303 51.5
EL10Ac9g22998 Beta vulgaris HOM05D008909 ORTHO05D008474 3.4e-58 229.6 281 45.6
EL10Ac9g23001 Beta vulgaris HOM05D008909 ORTHO05D008474 7.6e-42 175.3 280 40.7
EL10Ac9g23003 Beta vulgaris HOM05D008909 ORTHO05D008474 1.3e-41 174.5 273 41.4
Ah.13g070220 Amaranthus hybridus HOM05D008909 ORTHO05D008474 7.3e-37 158.7 279 41.9
Ah.13g070250 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.8e-36 156.0 277 42.6
Ah.13g070240 Amaranthus hybridus HOM05D008909 ORTHO05D008474 2.6e-34 150.2 275 41.1
AUR62032926 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.4e-34 149.8 281 37.7
Ah.13g070230 Amaranthus hybridus HOM05D008909 ORTHO05D008474 7.6e-34 148.7 278 39.9
AUR62040175 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.5e-31 139.8 132 59.8
AUR62040180 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.5e-31 139.8 132 59.8
AUR62027670 Chenopodium quinoa HOM05D008909 ORTHO05D008474 9.6e-29 131.7 219 39.7
AUR62017741 Chenopodium quinoa HOM05D008909 ORTHO05D008474 1.6e-23 114.4 277 34.3
EL10Ac9g22999 Beta vulgaris HOM05D008909 ORTHO05D008474 4.6e-23 112.8 254 36.6
EL10Ac9g22409 Beta vulgaris HOM05D008909 ORTHO05D008474 6.0e-23 112.5 295 34.6
AUR62032929 Chenopodium quinoa HOM05D008909 ORTHO05D008474 5.1e-22 109.4 275 33.5
EL10Ac2g02518 Beta vulgaris HOM05D008909 ORTHO05D008474 1.9e-21 107.5 272 32.7
Sed0019767 Sechium edule HOM05D007873 ORTHO05D008474 2.1e-20 104.0 274 29.6
EL10Ac4g08719 Beta vulgaris HOM05D008909 ORTHO05D008474 2.8e-20 103.6 308 31.5
EL10Ac2g02517 Beta vulgaris HOM05D008909 ORTHO05D008474 6.9e-19 99.0 271 31.7
EL10Ac9g22767 Beta vulgaris HOM05D000027 ORTHO05D000066 6.9e-19 99.0 255 32.9
EL10Ac9g22410 Beta vulgaris HOM05D008909 ORTHO05D008474 1.5e-18 97.8 300 29.7
Hma1.2p1_1489F.1_g286630 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 2.6e-18 97.1 256 30.9
DCAR_028983 Daucus carota HOM05D008909 ORTHO05D008474 7.6e-18 95.5 251 31.9
Manes.04G007700 Manihot esculenta HOM05D007873 ORTHO05D008474 7.6e-18 95.5 260 30.0
Aqoxy4G00463 Aquilegia oxysepala HOM05D007873 ORTHO05D008474 1.0e-17 95.1 250 31.2
CANSAT11G1894 Cannabis sativa HOM05D019586 ORTHO05D008474 1.0e-17 95.1 246 30.1
Sed0019792 Sechium edule HOM05D007873 ORTHO05D008474 2.9e-17 93.6 249 30.1
Sed0008584 Sechium edule HOM05D007873 ORTHO05D008474 4.9e-17 92.8 253 28.1
EL10Ac9g23005 Beta vulgaris HOM05D008909 ORTHO05D008474 1.4e-16 91.3 209 35.9
CANSAT11G0893 Cannabis sativa HOM05D019586 ORTHO05D008474 1.9e-16 90.9 246 30.5
Manes.04G007600 Manihot esculenta HOM05D007873 ORTHO05D008474 1.9e-16 90.9 249 29.7
ClCG11G001040 Citrullus lanatus HOM05D007873 ORTHO05D008474 2.5e-16 90.5 257 29.6
Sed0008796 Sechium edule HOM05D007873 ORTHO05D008474 3.2e-16 90.1 223 30.0
CANSAT11G2484 Cannabis sativa HOM05D019586 ORTHO05D008474 1.6e-15 87.8 283 28.3
RhsimUnG0137100 Rhododendron simsii HOM05D007873 ORTHO05D008474 1.6e-15 87.8 218 30.3
Duzib147G0268 Durio zibethinus HOM05D007873 ORTHO05D008474 2.1e-15 87.4 274 28.5
MD08G1097300 Malus domestica HOM05D007873 ORTHO05D008474 2.7e-15 87.0 247 28.3
Ah.10g031100 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.6e-15 86.3 259 34.4
CANSAT11G0362 Cannabis sativa HOM05D019586 ORTHO05D008474 4.6e-15 86.3 245 31.0
CsaV3_6G003670 Cucumis sativus L. HOM05D007873 ORTHO05D008474 4.6e-15 86.3 260 26.9
Sed0002766 Sechium edule HOM05D007873 ORTHO05D008474 6.0e-15 85.9 257 28.0
ClCG08G004120 Citrullus lanatus HOM05D007873 ORTHO05D008474 1.3e-14 84.7 254 28.3
Ah.01g012170 Amaranthus hybridus HOM05D008909 ORTHO05D008474 1.8e-14 84.3 249 29.3
Manes.04G007500 Manihot esculenta HOM05D007873 ORTHO05D008474 3.0e-14 83.6 267 29.2
Sed0001232 Sechium edule HOM05D007873 ORTHO05D008474 5.1e-14 82.8 252 29.4
Ah.01g011860 Amaranthus hybridus HOM05D008909 ORTHO05D008474 6.7e-14 82.4 226 28.8
CANSAT11G1228 Cannabis sativa HOM05D019586 ORTHO05D008474 6.7e-14 82.4 252 28.2
CANSAT11G2400 Cannabis sativa HOM05D019586 ORTHO05D008474 6.7e-14 82.4 209 31.6
Sed0008206 Sechium edule HOM05D007873 ORTHO05D008474 8.7e-14 82.0 240 27.1
Manes.04G007400 Manihot esculenta HOM05D007873 ORTHO05D008474 1.5e-13 81.3 260 29.6
Hma1.2p1_0383F.1_g140660 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 4.3e-13 79.7 254 28.0
ClCG09G009010 Citrullus lanatus HOM05D007873 ORTHO05D008474 7.4e-13 79.0 273 26.0
Hma1.2p1_0383F.1_g140670 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 9.7e-13 78.6 258 28.7
MELO3C025120.2 Cucumis melo HOM05D007873 ORTHO05D008474 1.6e-12 77.8 219 29.7
MD06G1085500 Malus domestica HOM05D007873 ORTHO05D008474 1.6e-12 77.8 282 27.0
Sed0015780 Sechium edule HOM05D007873 ORTHO05D008474 2.2e-12 77.4 212 29.7
MELO3C011620.2 Cucumis melo HOM05D007873 ORTHO05D008474 3.7e-12 76.6 209 27.3
CsaV3_5G024290 Cucumis sativus L. HOM05D007873 ORTHO05D008474 1.1e-11 75.1 206 29.6
Sed0026151 Sechium edule HOM05D007873 ORTHO05D008474 1.4e-11 74.7 252 27.8
MD00G1065500 Malus domestica HOM05D007873 ORTHO05D008474 3.1e-11 73.6 233 29.2
MELO3C029150.2 Cucumis melo HOM05D007873 ORTHO05D008474 6.9e-11 72.4 234 28.2
ClCG08G004130 Citrullus lanatus HOM05D007873 ORTHO05D008474 3.4e-10 70.1 239 27.2
Hma1.2p1_1730F.1_g299700 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 3.4e-10 70.1 249 28.9
AUR62041699 Chenopodium quinoa HOM05D007873 ORTHO05D008474 5.9e-10 69.3 189 29.1
Hma1.2p1_1796F.1_g302770 Hydrangea macrophylla HOM05D007873 ORTHO05D008474 1.3e-09 68.2 249 28.9
Prupe.1G294900 Prunus persica HOM05D007873 ORTHO05D008474 5.0e-09 66.2 237 29.1
MD06G1085400 Malus domestica HOM05D007873 ORTHO05D008474 8.5e-09 65.5 270 26.7
Prupe.1G294800 Prunus persica HOM05D007873 ORTHO05D008474 8.5e-09 65.5 246 25.6
Prupe.1G294700 Prunus persica HOM05D007873 ORTHO05D008474 1.4e-08 64.7 276 27.5
Ah.15g098420 Amaranthus hybridus HOM05D008909 ORTHO05D008474 4.2e-08 63.2 236 27.1
Sed0009445 Sechium edule HOM05D007873 ORTHO05D008474 4.6e-07 59.7 260 27.7
Prupe.1G294500 Prunus persica HOM05D007873 ORTHO05D008474 1.0e-06 58.5 278 26.3
Sed0020612 Sechium edule HOM05D007873 ORTHO05D008474 1.8e-06 57.8 265 24.5
AUR62015055 Chenopodium quinoa HOM05D008909 ORTHO05D008474 3.0e-06 57.0 57 47.4


User provided reference genes

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