Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032810 Chenopodium quinoa HOM05D021374 ORTHO05D004624 8.0e-126 453.8 227 100.0
AUR62017407 Chenopodium quinoa HOM05D021374 ORTHO05D004624 2.8e-118 428.7 227 96.0
AUR62015480 Chenopodium quinoa HOM05D021374 ORTHO05D004624 6.4e-91 337.8 178 95.5
AUR62015431 Chenopodium quinoa HOM05D021374 ORTHO05D004624 9.7e-63 244.2 123 99.2
AUR62015314 Chenopodium quinoa HOM05D004174 ORTHO05D004624 8.0e-25 118.2 75 76.0
AUR62002906 Chenopodium quinoa HOM05D021374 ORTHO05D004624 8.8e-24 114.8 82 68.3
AUR62033537 Chenopodium quinoa HOM05D021374 ORTHO05D004624 9.5e-18 94.7 73 58.9
AUR62016380 Chenopodium quinoa HOM05D003244 ORTHO05D003645 6.2e-09 65.5 129 38.8
AUR62021269 Chenopodium quinoa HOM05D000559 ORTHO05D000596 3.1e-08 63.2 36 86.1
AUR62016061 Chenopodium quinoa HOM05D000559 ORTHO05D000596 5.2e-08 62.4 31 90.3
EL10Ac3g05743 Beta vulgaris HOM05D000559 ORTHO05D000596 1.2e-07 61.2 36 83.3
Ah.13g067800 Amaranthus hybridus HOM05D000559 ORTHO05D000596 1.5e-07 60.8 36 83.3
CSS0031541 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 2.0e-07 60.5 36 83.3
Dinv28509 Davidia involucrata HOM05D000559 ORTHO05D000596 2.0e-07 60.5 36 80.6
Actinidia13541 Actinidia chinensis HOM05D000559 ORTHO05D000596 4.4e-07 59.3 36 77.8
EL10Ac9g21941 Beta vulgaris HOM05D003244 ORTHO05D003645 4.4e-07 59.3 51 62.7
QL11p003861 Quercus lobata HOM05D000559 ORTHO05D000596 7.5e-07 58.5 36 77.8
Hund04684 Selenicereus undatus HOM05D000559 ORTHO05D000596 9.8e-07 58.2 36 80.6
DCAR_020209 Daucus carota HOM05D000559 ORTHO05D000596 1.3e-06 57.8 36 77.8
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 1.3e-06 57.8 36 77.8
vmacro09871 Vaccinium macrocarpon HOM05D000559 ORTHO05D000596 1.3e-06 57.8 36 77.8
DCAR_018140 Daucus carota HOM05D000559 ORTHO05D000596 1.7e-06 57.4 36 75.0
Sc25g0000310 Simmondsia chinensis HOM05D000559 ORTHO05D000596 1.7e-06 57.4 36 80.6
ATR0564G090 Amborella trichopoda HOM05D000559 ORTHO05D000596 2.2e-06 57.0 36 75.0
arahy.Tifrunner.gnm1.ann1.P1Z684 Arachis hypogaea HOM05D000559 ORTHO05D000596 2.2e-06 57.0 36 75.0
arahy.Tifrunner.gnm1.ann1.X4R686 Arachis hypogaea HOM05D000559 ORTHO05D000596 2.2e-06 57.0 36 75.0
HPP92_026954 Vanilla planifolia HOM05D000559 ORTHO05D000596 2.2e-06 57.0 36 75.0
Actinidia31799 Actinidia chinensis HOM05D000559 ORTHO05D000596 2.9e-06 56.6 36 77.8
CSS0006539 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 2.9e-06 56.6 115 33.9
CSS0009514 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 2.9e-06 56.6 115 33.9
CSS0048497 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 3.7e-06 56.2 115 33.9
Hma1.2p1_0488F.1_g163930 Hydrangea macrophylla HOM05D000559 ORTHO05D000596 3.7e-06 56.2 36 72.2
MD02G1197500 Malus domestica HOM05D000559 ORTHO05D000596 3.7e-06 56.2 36 75.0
TAR291G0002 Trochodendron aralioides HOM05D000559 ORTHO05D000596 3.7e-06 56.2 36 75.0
Ah.16g101230 Amaranthus hybridus HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
CSS0004917 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 4.9e-06 55.8 115 33.9
CSS0040397 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Cpa.g.sc116.34 Carica papaya HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Cfa001817 Carpinus fangiana HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 75.0
CiPaw.04G046400 Carya illinoinensis HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Cc07_g08070 Coffea canephora HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
COL.COLO4_15736 Corchorus olitorius HOM05D000559 ORTHO05D000596 4.9e-06 55.8 77 48.1
Haze_14235 Corylus avellana HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Haze_16713 Corylus avellana HOM05D000559 ORTHO05D000596 4.9e-06 55.8 56 55.4
Duzib133G0871 Durio zibethinus HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
ECA238G1776 Erigeron canadensis HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
FAN28G0710 Fragaria x ananassa HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Gohir.A07G077200 Gossypium hirsutum HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Gohir.D07G081900 Gossypium hirsutum HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Gorai.001G087000 Gossypium raimondii HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
HanXRQChr14g0440331 Helianthus annuus HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Lsat_1_v5_gn_2_79920 Lactuca sativa HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
LjContig00141g0006487 Lotus japonicus HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
MBI12_g40235_MAGBIO Magnolia biondii HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
MD09G1262800 Malus domestica HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Nitab4.5_0002664g0050 Nicotiana tabacum HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Nitab4.5_0009638g0010 Nicotiana tabacum HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Oeu000911.1 Olea europaea HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Peaxi162Scf02113g00016 Petunia axillaris HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Psat2g041960 Pisum sativum HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
RcHm_v2.0_Chr3g0493391 Rosa chinensis HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Thecc.04G119000 Theobroma cacao HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
TPR.G3488 Trifolium pratense HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
TWI74G0742 Tripterygium wilfordii HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
GSVIVG01030838001 Vitis vinifera HOM05D000559 ORTHO05D000596 4.9e-06 55.8 36 72.2
Aqoxy3G00099 Aquilegia oxysepala HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
Dinv32407 Davidia involucrata HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 75.0
FvH4_1g28890 Fragaria vesca HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
FAN19G2201 Fragaria x ananassa HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
Prupe.2G287100 Prunus persica HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
unitig_0.g481 Utricularia gibba HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
vmacro06736 Vaccinium macrocarpon HOM05D000559 ORTHO05D000596 6.4e-06 55.5 36 72.2
CSS0000483 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 8.3e-06 55.1 31 74.2
CSS0045652 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D000596 8.3e-06 55.1 73 46.6
AUR62023180 Chenopodium quinoa HOM05D000559 ORTHO05D000596 8.3e-06 55.1 31 74.2
Psat5g185320 Pisum sativum HOM05D000559 ORTHO05D006587 8.3e-06 55.1 31 74.2
Psat7g021760 Pisum sativum HOM05D000559 ORTHO05D000596 8.3e-06 55.1 31 74.2
TWI14G1053 Tripterygium wilfordii HOM05D000559 ORTHO05D000596 8.3e-06 55.1 36 72.2


User provided reference genes

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