Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 9.4e-95 350.1 170 100.0
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 7.9e-86 320.5 170 91.2
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 4.5e-81 304.7 170 84.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.3e-80 303.1 167 84.4
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 1.7e-80 302.8 170 84.7
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 3.8e-80 301.6 167 83.8
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.1e-79 300.1 170 82.4
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.5e-79 299.7 167 83.2
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 3.2e-79 298.5 167 82.6
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 4.2e-79 298.1 167 83.8
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 5.5e-79 297.7 164 86.0
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 5.5e-79 297.7 175 83.4
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 7.2e-79 297.4 164 84.1
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 9.4e-79 297.0 170 82.4
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.6e-78 296.2 168 82.7
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.6e-78 296.2 167 82.6
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.6e-78 296.2 167 83.2
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.6e-78 296.2 167 83.2
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 4.7e-78 294.7 166 84.9
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.0e-78 293.9 167 82.0
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 8.0e-78 293.9 170 81.8
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.0e-77 293.5 167 82.0
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.0e-77 293.5 167 82.0
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 1.4e-77 293.1 167 83.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.8e-77 292.7 166 84.9
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 167 82.0
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.3e-77 292.4 167 82.0
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 4.0e-77 291.6 167 82.6
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 5.2e-77 291.2 167 80.8
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 8.8e-77 290.4 171 79.5
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.5e-76 289.7 164 82.3
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 4.4e-76 288.1 174 80.5
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.4e-76 288.1 165 81.8
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 7.5e-76 287.3 171 80.1
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 9.7e-76 287.0 167 82.0
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 9.7e-76 287.0 172 80.2
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 9.7e-76 287.0 174 79.9
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 1.3e-75 286.6 170 80.0
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.3e-75 286.6 174 79.9
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 1.7e-75 286.2 169 84.0
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 2.2e-75 285.8 168 81.0
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.2e-75 285.8 168 80.4
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 2.2e-75 285.8 166 81.3
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.8e-75 285.4 171 78.4
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 4.8e-75 284.6 174 79.3
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 4.8e-75 284.6 165 82.4
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.4e-74 283.1 167 77.2
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.4e-74 283.1 167 81.4
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 3.1e-74 282.0 165 81.8
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 7.0e-74 280.8 172 79.1
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 7.0e-74 280.8 164 81.7
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 9.1e-74 280.4 172 79.7
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 9.1e-74 280.4 155 85.2
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.2e-73 280.0 167 77.8
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.6e-73 279.6 168 79.2
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.0e-73 279.3 165 81.2
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 2.7e-73 278.9 167 79.6
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 4.5e-73 278.1 164 81.1
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 4.5e-73 278.1 170 78.8
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 5.9e-73 277.7 176 76.7
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 5.9e-73 277.7 171 76.0
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 1.0e-72 276.9 161 78.9
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 1.0e-72 276.9 164 79.3
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.3e-72 276.6 165 79.4
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.3e-72 276.6 165 79.4
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.3e-72 276.6 161 80.7
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.7e-72 276.2 174 77.0
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.2e-72 275.8 176 76.1
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 2.9e-72 275.4 165 80.6
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 2.9e-72 275.4 176 75.6
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 3.8e-72 275.0 165 79.4
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 3.8e-72 275.0 161 78.3
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 5.0e-72 274.6 153 85.0
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 8.5e-72 273.9 165 79.4
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.2e-71 271.9 166 78.9
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 4.2e-71 271.6 176 76.1
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 5.5e-71 271.2 169 78.7
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 2.1e-70 269.2 168 76.8
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 6.1e-70 267.7 155 80.6
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 6.1e-70 267.7 167 79.6
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 8.0e-70 267.3 163 77.3
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.4e-69 266.5 151 82.8
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 5.2e-69 264.6 165 77.0
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 6.8e-69 264.2 162 77.8
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.5e-68 263.1 153 80.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.0e-68 262.7 151 80.8
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 3.4e-68 261.9 166 74.7
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 1.3e-67 260.0 165 77.0
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.7e-67 259.6 156 79.5
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.8e-67 258.8 164 73.8
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 2.8e-67 258.8 164 74.4
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 6.3e-67 257.7 165 75.8
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.4e-66 256.5 167 74.3
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 3.1e-66 255.4 155 75.5
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 5.4e-66 254.6 172 72.7
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.5e-65 251.9 165 73.3
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 5.9e-65 251.1 125 96.0
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 5.9e-65 251.1 188 68.1
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 7.7e-65 250.8 154 77.9
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.0e-64 250.4 161 75.8
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 5.0e-64 248.1 151 77.5
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.1e-63 246.9 151 76.8
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 2.5e-63 245.7 167 73.1
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 9.5e-63 243.8 151 76.2
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 3.6e-62 241.9 139 79.1
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 3.6e-62 241.9 139 79.1
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 6.8e-61 237.7 188 63.3
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.6e-57 226.5 157 69.4
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.6e-57 226.5 155 67.1
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 5.9e-57 224.6 151 68.2
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 2.3e-56 222.6 142 76.8
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 6.6e-56 221.1 141 75.2
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.5e-55 219.9 179 64.2
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.5e-55 219.9 166 68.1
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 6.1e-54 214.5 157 63.1
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 3.0e-53 212.2 313 41.5
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 8.9e-53 210.7 134 76.1
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 2.2e-51 206.1 172 64.5
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 8.6e-48 194.1 112 80.4
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 6.2e-38 161.4 305 35.7
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.5e-36 156.8 221 43.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 6.4e-35 151.4 202 43.6
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.2e-30 134.8 84 79.8
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 4.4e-28 128.6 76 76.3
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.2e-25 120.6 67 83.6
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 3.5e-25 119.0 79 68.4
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 3.8e-19 99.0 79 57.0
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 3.1e-13 79.3 66 54.5
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 6.9e-13 78.2 44 72.7
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 6.4e-11 71.6 88 43.2
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 3.2e-10 69.3 81 49.4
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.6e-09 65.5 117 35.9
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 3.7e-06 55.8 47 59.6
SalBow1G5171 Salvia bowleyana HOM05D006214 ORTHO05D007723 4.8e-06 55.5 34 79.4
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.2e-06 55.1 38 68.4


User provided reference genes

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