Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.4e-156 556.2 279 100.0
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.7e-146 522.7 279 92.1
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 9.9e-126 453.8 278 79.5
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 1.0e-114 417.2 325 65.2
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 2.6e-110 402.5 277 70.8
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 7.9e-107 391.0 277 69.3
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 1.0e-106 390.6 275 70.5
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 5.6e-105 384.8 276 68.1
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 2.8e-104 382.5 277 68.6
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 2.8e-104 382.5 277 69.0
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 3.6e-104 382.1 277 68.2
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 8.1e-104 380.9 277 66.4
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.4e-103 379.4 279 67.0
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.4e-103 379.4 279 65.6
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 4.0e-103 378.6 279 67.0
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 4.0e-103 378.6 276 67.8
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 6.9e-103 377.9 277 65.0
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 6.9e-103 377.9 279 66.3
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 2.0e-102 376.3 277 65.7
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 3.4e-102 375.6 276 65.9
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 4.5e-102 375.2 276 65.2
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 4.5e-102 375.2 277 65.3
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 5.8e-102 374.8 279 64.9
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 5.8e-102 374.8 279 65.9
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 5.8e-102 374.8 277 66.4
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 9.9e-102 374.0 277 65.3
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 6.4e-101 371.3 277 65.0
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.1e-100 370.5 276 65.9
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 1.4e-100 370.2 277 63.9
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 9.3e-100 367.5 279 64.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.2e-99 367.1 277 65.0
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.2e-99 367.1 277 64.6
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 1.2e-99 367.1 279 64.2
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 1.6e-99 366.7 276 65.2
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 3.5e-99 365.5 275 65.1
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 3.5e-99 365.5 283 64.0
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.5e-99 365.5 277 65.0
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 3.5e-99 365.5 275 64.7
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 4.6e-99 365.2 277 64.6
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 6.0e-99 364.8 277 63.5
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.3e-98 363.6 277 64.6
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 1.8e-98 363.2 277 62.5
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 3.9e-98 362.1 276 65.2
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.9e-98 362.1 277 64.6
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 5.1e-98 361.7 254 68.1
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 1.1e-97 360.5 276 64.1
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.1e-97 360.5 277 63.2
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.5e-97 360.1 277 63.9
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 3.3e-97 359.0 276 64.5
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 3.3e-97 359.0 277 63.5
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 5.6e-97 358.2 277 62.1
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 7.4e-97 357.8 276 64.5
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 7.4e-97 357.8 276 64.5
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 7.4e-97 357.8 276 64.5
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 7.4e-97 357.8 281 62.3
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 9.6e-97 357.5 281 61.6
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 9.6e-97 357.5 277 63.2
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 1.6e-96 356.7 276 63.0
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 2.1e-96 356.3 276 64.1
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 3.7e-96 355.5 275 62.9
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 3.7e-96 355.5 276 60.9
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 4.8e-96 355.1 276 64.1
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 8.1e-96 354.4 276 63.8
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 1.4e-95 353.6 276 63.8
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 1.4e-95 353.6 276 63.8
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 1.8e-95 353.2 276 63.8
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 1.8e-95 353.2 276 61.2
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 2.4e-95 352.8 276 62.0
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 4.0e-95 352.1 276 61.6
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 4.0e-95 352.1 277 61.4
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 5.3e-95 351.7 299 61.5
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 1.2e-94 350.5 276 62.7
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 2.0e-94 349.7 276 64.1
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 2.6e-94 349.4 248 69.8
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 4.5e-94 348.6 310 57.4
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 5.8e-94 348.2 255 67.5
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 7.6e-94 347.8 276 61.2
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 7.6e-94 347.8 266 66.5
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 1.3e-93 347.1 266 66.5
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 2.2e-93 346.3 312 55.8
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 8.4e-93 344.4 275 62.9
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 8.4e-93 344.4 255 66.7
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 1.9e-92 343.2 276 62.3
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 3.2e-92 342.4 275 60.4
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 7.1e-92 341.3 260 66.9
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 1.2e-91 340.5 264 63.6
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.6e-91 340.1 275 61.8
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 2.3e-90 336.3 258 64.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 3.0e-90 335.9 282 61.7
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 8.2e-88 327.8 245 66.9
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 1.4e-87 327.0 257 64.6
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 2.9e-85 319.3 257 60.7
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 1.2e-83 313.9 275 60.7
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 4.6e-83 312.0 276 58.7
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 6.1e-83 311.6 269 60.2
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 3.9e-82 308.9 279 56.3
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 1.1e-81 307.4 276 56.2
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 6.9e-79 298.1 277 55.2
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 7.2e-76 288.1 216 62.5
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 8.8e-74 281.2 277 51.6
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 4.4e-73 278.9 276 52.5
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 2.0e-70 270.0 167 74.9
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 1.4e-63 247.3 285 50.5
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 1.5e-60 237.3 281 45.6
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 2.5e-60 236.5 281 44.8
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 1.6e-59 233.8 139 77.7
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 2.1e-59 233.4 254 49.2
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 8.8e-58 228.0 279 45.2
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.5e-57 227.3 166 66.9
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 5.7e-57 225.3 279 43.0
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 2.2e-56 223.4 170 61.8
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 4.1e-55 219.2 170 60.0
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 2.0e-54 216.9 139 71.2
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.9e-45 186.4 153 62.1
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 2.9e-45 186.4 254 44.9
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 5.5e-44 182.2 111 76.6
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 3.8e-37 159.5 199 48.2
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 3.6e-35 152.9 303 35.0
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 6.8e-34 148.7 141 53.2
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 5.7e-33 145.6 111 61.3
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 2.9e-32 143.3 293 34.5
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 6.4e-32 142.1 294 33.3
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.1e-31 141.4 146 47.9
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.1e-26 124.8 68 80.9
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.3e-24 117.9 128 52.3
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 1.1e-20 104.8 304 30.3
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 1.5e-20 104.4 149 40.3
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 2.2e-16 90.5 60 71.7
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 7.8e-14 82.0 76 51.3
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 1.7e-13 80.9 245 26.9
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 1.2e-09 68.2 65 55.4
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 1.3e-08 64.7 65 47.7


User provided reference genes

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