Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032035 Chenopodium quinoa HOM05D018411 ORTHO05D137648 5.2e-96 354.4 179 100.0
AUR62021435 Chenopodium quinoa HOM05D018411 ORTHO05D138277 1.0e-91 340.1 196 90.3
AUR62024681 Chenopodium quinoa HOM05D018411 ORTHO05D138303 7.2e-37 157.9 90 91.1
AUR62038947 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.7e-34 148.3 100 77.0
AUR62017762 Chenopodium quinoa HOM05D018411 ORTHO05D138412 6.1e-20 101.7 53 92.5
AUR62026457 Chenopodium quinoa HOM05D018411 ORTHO05D137623 1.3e-17 94.0 67 71.6
AUR62005065 Chenopodium quinoa HOM05D018411 ORTHO05D021565 8.8e-11 71.2 35 91.4
AUR62038848 Chenopodium quinoa HOM05D000485 ORTHO05D000341 9.1e-08 61.2 36 77.8
Gohir.A02G068800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 5.9e-07 58.5 80 45.0
Gohir.D02G075300 Gossypium hirsutum HOM05D000485 ORTHO05D000341 5.9e-07 58.5 80 45.0
Gorai.005G084700 Gossypium raimondii HOM05D000485 ORTHO05D000341 5.9e-07 58.5 80 45.0
VMungo1309G0192 Vigna mungo HOM05D000485 ORTHO05D000341 5.9e-07 58.5 98 36.7
Dinv41148 Davidia involucrata HOM05D000485 ORTHO05D000341 1.0e-06 57.8 85 40.0
Duzib041G0093 Durio zibethinus HOM05D000485 ORTHO05D000341 1.0e-06 57.8 80 43.8
Gohir.A05G240700 Gossypium hirsutum HOM05D000485 ORTHO05D000341 1.0e-06 57.8 86 40.7
AUR62037762 Chenopodium quinoa HOM05D007602 ORTHO05D009086 1.3e-06 57.4 36 83.3
Gohir.D05G241800 Gossypium hirsutum HOM05D000485 ORTHO05D000341 1.3e-06 57.4 86 40.7
Gorai.009G251200 Gossypium raimondii HOM05D000485 ORTHO05D000341 1.3e-06 57.4 86 40.7
MD10G1008800 Malus domestica HOM05D000485 ORTHO05D000341 1.3e-06 57.4 106 34.0
GSVIVG01009980001 Vitis vinifera HOM05D000485 ORTHO05D000341 1.3e-06 57.4 73 42.5
vmacro10477 Vaccinium macrocarpon HOM05D000485 ORTHO05D000341 1.7e-06 57.0 90 37.8
arahy.Tifrunner.gnm1.ann1.BQ360W Arachis hypogaea HOM05D000485 ORTHO05D000341 2.3e-06 56.6 111 33.3
arahy.Tifrunner.gnm1.ann1.K57DW9 Arachis hypogaea HOM05D000485 ORTHO05D000341 2.3e-06 56.6 111 33.3
Psat5g083360 Pisum sativum HOM05D000485 ORTHO05D000341 2.3e-06 56.6 82 39.0
SEGI_01280 Sequoiadendron giganteum HOM05D000485 ORTHO05D000341 2.3e-06 56.6 69 37.7
Ciclev10001100m.g Citrus clementina HOM05D000485 ORTHO05D000341 2.9e-06 56.2 79 38.0
COL.COLO4_05036 Corchorus olitorius HOM05D000485 ORTHO05D000341 2.9e-06 56.2 80 43.8
Lalb_Chr08g0240901 Lupinus albus HOM05D000485 ORTHO05D000341 2.9e-06 56.2 82 40.2
Medtr3g088885 Medicago truncatula HOM05D000485 ORTHO05D000341 2.9e-06 56.2 82 40.2
SMO358G0674 Selaginella moellendorffii HOM05D000485 ORTHO05D000341 2.9e-06 56.2 91 35.2
Ah.05g169230 Amaranthus hybridus HOM05D000485 ORTHO05D000341 3.8e-06 55.8 80 41.2
Dinv25776 Davidia involucrata HOM05D000485 ORTHO05D000341 3.8e-06 55.8 73 42.5
Glyma.11G178503 Glycine max HOM05D000485 ORTHO05D000341 3.8e-06 55.8 82 40.2
Glyma.13G036400 Glycine max HOM05D000485 ORTHO05D000341 3.8e-06 55.8 82 40.2
Glyma.14G158900 Glycine max HOM05D000485 ORTHO05D000341 3.8e-06 55.8 82 40.2
Lsat_1_v5_gn_8_35641 Lactuca sativa HOM05D000485 ORTHO05D000341 3.8e-06 55.8 111 29.7
Thecc.08G138200 Theobroma cacao HOM05D000485 ORTHO05D000341 3.8e-06 55.8 80 43.8
Actinidia36217 Actinidia chinensis HOM05D000485 ORTHO05D000341 5.0e-06 55.5 66 45.5
DCAR_014494 Daucus carota HOM05D000485 ORTHO05D000341 5.0e-06 55.5 93 33.3
ECA233G0968 Erigeron canadensis HOM05D000485 ORTHO05D000341 5.0e-06 55.5 89 34.8
Eucgr.F02763 Eucalyptus grandis HOM05D000485 ORTHO05D000341 5.0e-06 55.5 85 37.6
Lsat_1_v5_gn_4_25621 Lactuca sativa HOM05D000485 ORTHO05D000341 5.0e-06 55.5 89 34.8
THA.LOC104812060 Tarenaya hassleriana HOM05D000485 ORTHO05D000341 5.0e-06 55.5 112 31.2
GSVIVG01008583001 Vitis vinifera HOM05D000485 ORTHO05D000341 5.0e-06 55.5 64 45.3
Cfa018395 Carpinus fangiana HOM05D000485 ORTHO05D000341 6.6e-06 55.1 85 37.6
ECA246G2070 Erigeron canadensis HOM05D000485 ORTHO05D000341 6.6e-06 55.1 68 39.7
Glyma.06G120500 Glycine max HOM05D000485 ORTHO05D000341 6.6e-06 55.1 82 37.8
Hma1.2p1_0107F.1_g051240 Hydrangea macrophylla HOM05D000485 ORTHO05D000341 6.6e-06 55.1 73 43.8
Oeu047145.1 Olea europaea HOM05D000485 ORTHO05D000341 6.6e-06 55.1 66 45.5
Phvul.009G133100 Phaseolus vulgaris HOM05D000485 ORTHO05D000341 6.6e-06 55.1 73 42.5
Sed0015794 Sechium edule HOM05D000485 ORTHO05D000341 6.6e-06 55.1 102 33.3
Eucgr.I01627 Eucalyptus grandis HOM05D000485 ORTHO05D000341 8.6e-06 54.7 70 42.9
HanXRQChr12g0365001 Helianthus annuus HOM05D000485 ORTHO05D000341 8.6e-06 54.7 85 35.3
HanXRQChr16g0500521 Helianthus annuus HOM05D000485 ORTHO05D000341 8.6e-06 54.7 89 36.0
Lalb_Chr04g0263601 Lupinus albus HOM05D000485 ORTHO05D000341 8.6e-06 54.7 55 49.1
VMungo0647G1924 Vigna mungo HOM05D000485 ORTHO05D000341 8.6e-06 54.7 73 42.5


User provided reference genes

Program Settings