Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62032011 Chenopodium quinoa HOM05D005516 ORTHO05D006713 2.9e-77 292.0 163 100.0
AUR62018088 Chenopodium quinoa HOM05D005516 ORTHO05D006713 8.0e-51 204.1 122 86.9
Ah.13g074870 Amaranthus hybridus HOM05D005516 ORTHO05D006713 3.1e-39 165.6 162 57.4
EL10Ac3g06621 Beta vulgaris HOM05D005516 ORTHO05D006713 3.8e-37 158.7 134 62.7
Hund20712 Selenicereus undatus HOM05D005516 ORTHO05D006713 3.8e-37 158.7 159 55.3
Hund20711 Selenicereus undatus HOM05D005516 ORTHO05D006713 7.7e-30 134.4 136 52.9
SGA_v2.0_scaffold69G23215 Striga asiatica HOM05D000039 ORTHO05D000370 1.5e-28 130.2 156 51.9
GSVIVG01029962001 Vitis vinifera HOM05D005516 ORTHO05D006713 5.5e-28 128.3 128 56.2
PSO339G3932 Papaver somniferum HOM05D005516 ORTHO05D006713 5.2e-26 121.7 99 59.6
CSS0003853 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 6.8e-26 121.3 74 73.0
CSS0039228 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 6.8e-26 121.3 74 73.0
Eucgr.K01534 Eucalyptus grandis HOM05D005516 ORTHO05D006713 1.2e-25 120.6 100 59.0
Duzib128G1828 Durio zibethinus HOM05D005516 ORTHO05D006713 2.0e-25 119.8 140 50.7
SGA_v2.0_scaffold66G22373 Striga asiatica HOM05D005516 ORTHO05D006713 4.4e-25 118.6 128 51.6
Atru.chr2.1522 Acer truncatum HOM05D005516 ORTHO05D006713 5.7e-25 118.2 74 71.6
arahy.Tifrunner.gnm1.ann1.BMR428 Arachis hypogaea HOM05D005516 ORTHO05D006713 7.5e-25 117.9 74 71.6
Cfa017721 Carpinus fangiana HOM05D005516 ORTHO05D006713 9.8e-25 117.5 121 55.4
Haze_20402 Corylus avellana HOM05D005516 ORTHO05D006713 1.3e-24 117.1 121 53.7
Thecc.05G241500 Theobroma cacao HOM05D005516 ORTHO05D006713 1.3e-24 117.1 142 49.3
Duzib177G0157 Durio zibethinus HOM05D005516 ORTHO05D006713 1.7e-24 116.7 142 50.0
Hma1.2p1_0526F.1_g172920 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 2.2e-24 116.3 74 71.6
Lsat_1_v5_gn_5_154420 Lactuca sativa HOM05D005516 ORTHO05D006713 2.2e-24 116.3 74 71.6
VMungo1383G1686 Vigna mungo HOM05D005516 ORTHO05D006713 2.2e-24 116.3 96 57.3
CSS0031486 Camellia sinensis var. sinensis HOM05D005516 ORTHO05D006713 3.7e-24 115.5 74 71.6
Hma1.2p1_0106F.1_g051205 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 3.7e-24 115.5 74 70.3
Ca_08316_v3 Cicer arietinum L. HOM05D005516 ORTHO05D006713 4.9e-24 115.2 133 50.4
DCAR_020653 Daucus carota HOM05D005516 ORTHO05D006713 4.9e-24 115.2 137 51.1
Lj1g0004780 Lotus japonicus HOM05D005516 ORTHO05D006713 6.3e-24 114.8 133 48.9
Dinv13791 Davidia involucrata HOM05D005516 ORTHO05D006713 8.3e-24 114.4 145 51.0
vmacro08774 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 8.3e-24 114.4 74 71.6
Actinidia06205 Actinidia chinensis HOM05D005516 ORTHO05D006713 1.1e-23 114.0 146 50.7
arahy.Tifrunner.gnm1.ann1.253MNK Arachis hypogaea HOM05D005516 ORTHO05D006713 1.1e-23 114.0 74 70.3
Phvul.001G105600 Phaseolus vulgaris HOM05D005516 ORTHO05D006713 1.1e-23 114.0 139 48.9
Prupe.7G015800 Prunus persica HOM05D005516 ORTHO05D006713 1.1e-23 114.0 131 47.3
PSO384G4582 Papaver somniferum HOM05D005516 ORTHO05D006713 1.4e-23 113.6 136 49.3
Gorai.013G196100 Gossypium raimondii HOM05D005516 ORTHO05D006713 1.8e-23 113.2 74 68.9
Hma1.2p1_0526F.1_g172910 Hydrangea macrophylla HOM05D005516 ORTHO05D006713 1.8e-23 113.2 127 52.8
Manes.08G152800 Manihot esculenta HOM05D005516 ORTHO05D006713 1.8e-23 113.2 93 59.1
MELO3C008865.2 Cucumis melo HOM05D005516 ORTHO05D006713 2.4e-23 112.8 74 68.9
vmacro04358 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 2.4e-23 112.8 74 68.9
COL.COLO4_20092 Corchorus olitorius HOM05D005516 ORTHO05D006713 3.2e-23 112.5 105 56.2
FAN26G2397 Fragaria x ananassa HOM05D005516 ORTHO05D006713 3.2e-23 112.5 131 49.6
Rhsim08G0097500 Rhododendron simsii HOM05D005516 ORTHO05D006713 3.2e-23 112.5 109 56.9
Medtr7g086700 Medicago truncatula HOM05D005516 ORTHO05D006713 4.1e-23 112.1 73 68.5
Potri.019G040400 Populus trichocarpa HOM05D005516 ORTHO05D006713 4.1e-23 112.1 93 59.1
MBI05_g16554_MAGBIO Magnolia biondii HOM05D005516 ORTHO05D006713 5.4e-23 111.7 140 50.7
ClCG04G004680 Citrullus lanatus HOM05D005516 ORTHO05D006713 7.0e-23 111.3 112 56.2
Duzib106G1703 Durio zibethinus HOM05D005516 ORTHO05D006713 7.0e-23 111.3 142 47.2
Peaxi162Scf00575g00619 Petunia axillaris HOM05D005516 ORTHO05D006713 7.0e-23 111.3 133 47.4
vmacro18891 Vaccinium macrocarpon HOM05D005516 ORTHO05D006713 7.0e-23 111.3 74 67.6
Glyma.19G117300 Glycine max HOM05D005516 ORTHO05D006713 9.2e-23 110.9 94 58.5
Lalb_Chr14g0364851 Lupinus albus HOM05D005516 ORTHO05D006713 9.2e-23 110.9 96 59.4
TPR.G34794 Trifolium pratense HOM05D005516 ORTHO05D006713 9.2e-23 110.9 87 59.8
Cc06_g21500 Coffea canephora HOM05D005516 ORTHO05D006713 1.2e-22 110.5 136 45.6
HanXRQChr13g0406451 Helianthus annuus HOM05D005516 ORTHO05D006713 1.2e-22 110.5 88 56.8
Sabra13G0057700 Salix brachista HOM05D005516 ORTHO05D006713 1.2e-22 110.5 92 59.8
Sc07g0007460 Simmondsia chinensis HOM05D005516 ORTHO05D006713 1.2e-22 110.5 136 49.3
BcaB01g04919 Brassica carinata HOM05D005516 ORTHO05D006713 1.6e-22 110.2 89 56.2
CsaV3_4G031610 Cucumis sativus L. HOM05D005516 ORTHO05D006713 1.6e-22 110.2 107 55.1
FAN23G0165 Fragaria x ananassa HOM05D005516 ORTHO05D006713 2.0e-22 109.8 131 48.1
Gorai.004G252300 Gossypium raimondii HOM05D005516 ORTHO05D006713 2.0e-22 109.8 143 48.3
AT5G17840 Arabidopsis thaliana HOM05D005516 ORTHO05D006713 2.7e-22 109.4 93 57.0
Carub.0006s1607 Capsella rubella HOM05D005516 ORTHO05D006713 2.7e-22 109.4 93 57.0
CDE07G0498 Ceratophyllum demersum HOM05D005516 ORTHO05D006713 2.7e-22 109.4 96 54.2
Psat3g086560 Pisum sativum HOM05D005516 ORTHO05D006713 2.7e-22 109.4 98 54.1
FvH4_1g29880 Fragaria vesca HOM05D005516 ORTHO05D006713 3.5e-22 109.0 131 48.1
FAN19G1175 Fragaria x ananassa HOM05D005516 ORTHO05D006713 3.5e-22 109.0 131 48.1
MD12G1011900 Malus domestica HOM05D005516 ORTHO05D006713 3.5e-22 109.0 132 46.2
THA.LOC104820795 Tarenaya hassleriana HOM05D005516 ORTHO05D006713 3.5e-22 109.0 93 58.1
Aa31LG11G11740 Aethionema arabicum HOM05D005516 ORTHO05D006713 4.5e-22 108.6 93 54.8
BcaB01g05159 Brassica carinata HOM05D005516 ORTHO05D006713 4.5e-22 108.6 89 57.3
C03p09930 Brassica napus HOM05D005516 ORTHO05D006713 4.5e-22 108.6 89 57.3
BolC3t13481H Brassica oleracea HOM05D005516 ORTHO05D006713 4.5e-22 108.6 89 57.3
BraA03t10176Z Brassica rapa HOM05D005516 ORTHO05D006713 4.5e-22 108.6 89 57.3
ECA248G2342 Erigeron canadensis HOM05D005516 ORTHO05D006713 4.5e-22 108.6 100 52.0
Glyma.16G035800 Glycine max HOM05D005516 ORTHO05D006713 4.5e-22 108.6 139 47.5
A03p08520 Brassica napus HOM05D005516 ORTHO05D006713 5.9e-22 108.2 89 56.2
CARHR195330 Cardamine hirsuta HOM05D005516 ORTHO05D006713 5.9e-22 108.2 74 64.9
CiPaw.09G166400 Carya illinoinensis HOM05D005516 ORTHO05D006713 5.9e-22 108.2 96 56.2
Nitab4.5_0000613g0140 Nicotiana tabacum HOM05D005516 ORTHO05D006713 5.9e-22 108.2 138 48.6
Oeu044207.1 Olea europaea HOM05D005516 ORTHO05D006713 5.9e-22 108.2 73 65.8
Potri.013G066000 Populus trichocarpa HOM05D005516 ORTHO05D006713 5.9e-22 108.2 143 45.5
PGSC0003DMG400028211 Solanum tuberosum HOM05D005516 ORTHO05D006713 5.9e-22 108.2 134 45.5
DCAR_016961 Daucus carota HOM05D005516 ORTHO05D006713 7.8e-22 107.8 68 64.7
QL07p017420 Quercus lobata HOM05D005516 ORTHO05D006713 7.8e-22 107.8 133 47.4
Solyc10g081380.2 Solanum lycopersicum HOM05D005516 ORTHO05D006713 7.8e-22 107.8 134 46.3
C02p25840 Brassica napus HOM05D005516 ORTHO05D006713 1.0e-21 107.5 90 56.7
Thhalv10014907m.g Eutrema salsugineum HOM05D005516 ORTHO05D006713 1.0e-21 107.5 93 55.9
Nitab4.5_0000811g0010 Nicotiana tabacum HOM05D005516 ORTHO05D006713 1.0e-21 107.5 138 48.6
RcHm_v2.0_Chr3g0496031 Rosa chinensis HOM05D005516 ORTHO05D006713 1.3e-21 107.1 130 50.0
Sopen10g031880 Solanum pennellii HOM05D005516 ORTHO05D006713 1.3e-21 107.1 134 46.3
AL6G28930 Arabidopsis lyrata HOM05D005516 ORTHO05D006713 3.9e-21 105.5 93 53.8
CANSAT78G1214 Cannabis sativa HOM05D005516 ORTHO05D006713 3.9e-21 105.5 131 51.9
Ciclev10022543m.g Citrus clementina HOM05D005516 ORTHO05D006713 3.9e-21 105.5 148 43.9
MD14G1009500 Malus domestica HOM05D005516 ORTHO05D006713 5.0e-21 105.1 133 46.6
Sp6g26410 Schrenkiella parvula HOM05D005516 ORTHO05D006713 6.6e-21 104.8 109 50.5
Gohir.A08G219566 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.5e-20 103.6 132 47.7
Cpa.g.sc161.38 Carica papaya HOM05D005516 ORTHO05D006713 1.9e-20 103.2 75 62.7
TWI60G0181 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 1.9e-20 103.2 139 45.3
CAN.G128.137 Capsicum annuum HOM05D005516 ORTHO05D006713 2.5e-20 102.8 120 46.7
Sed0005064 Sechium edule HOM05D005516 ORTHO05D006713 2.5e-20 102.8 131 46.6
Zm00001eb052720 Zea mays HOM05D005516 ORTHO05D006713 3.3e-20 102.4 99 51.5
MSTRG.6254 Avicennia marina HOM05D005516 ORTHO05D006713 4.3e-20 102.1 128 45.3
TWI32G0326 Tripterygium wilfordii HOM05D005516 ORTHO05D006713 4.3e-20 102.1 140 44.3
SEGI_32239 Sequoiadendron giganteum HOM05D005516 ORTHO05D006713 5.6e-20 101.7 113 46.9
Zm00001eb218270 Zea mays HOM05D005516 ORTHO05D006713 2.1e-19 99.8 99 50.5
Nitab4.5_0000404g0040 Nicotiana tabacum HOM05D005516 ORTHO05D006713 3.6e-19 99.0 74 59.5
Os03g0656201 Oryza sativa ssp. japonica HOM05D005516 ORTHO05D006713 1.0e-18 97.4 91 51.6
Aqoxy1G00508 Aquilegia oxysepala HOM05D005516 ORTHO05D006713 8.9e-18 94.4 67 62.7
Gohir.A13G161100 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.0e-17 93.2 145 44.1
unitig_0.g583 Utricularia gibba HOM05D005516 ORTHO05D006713 2.0e-17 93.2 76 59.2
HPP92_000977 Vanilla planifolia HOM05D005516 ORTHO05D006713 5.8e-17 91.7 134 41.8
Gohir.D13G166400 Gossypium hirsutum HOM05D005516 ORTHO05D006713 1.7e-16 90.1 145 42.1
HPP92_001001 Vanilla planifolia HOM05D005516 ORTHO05D006713 2.2e-16 89.7 133 39.1
Lalb_Chr24g0401101 Lupinus albus HOM05D005516 ORTHO05D006713 3.7e-16 89.0 132 44.7
MSTRG.26204 Avicennia marina HOM05D005516 ORTHO05D006713 5.4e-15 85.1 141 40.4
Pp3c8_890 Physcomitrium patens HOM05D005516 ORTHO05D006713 3.5e-14 82.4 106 41.5
SalBow6G3354 Salvia bowleyana HOM05D005516 ORTHO05D006713 1.3e-13 80.5 107 43.0
BcaB05g23282 Brassica carinata HOM05D005516 ORTHO05D006713 1.7e-13 80.1 120 43.3
Peaxi162Scf00575g00620 Petunia axillaris HOM05D005516 ORTHO05D006713 2.5e-12 76.3 136 36.8
Mapoly0020s0169 Marchantia polymorpha HOM05D005516 ORTHO05D006713 3.3e-12 75.9 102 38.2
Actinidia07963 Actinidia chinensis HOM05D005516 ORTHO05D006713 7.3e-12 74.7 94 45.7
BcaC03g15036 Brassica carinata HOM05D005516 ORTHO05D006713 1.6e-11 73.6 67 52.2
BolC2t08658H Brassica oleracea HOM05D005516 ORTHO05D006713 1.6e-11 73.6 67 52.2
Gohir.A06G040900 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.8e-11 72.8 58 55.2
Gohir.D02G044500 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.8e-11 72.8 58 55.2
Gohir.D05G109301 Gossypium hirsutum HOM05D005516 ORTHO05D006713 2.8e-11 72.8 58 55.2
Ciclev10013836m.g Citrus clementina HOM05D005516 ORTHO05D006713 3.6e-11 72.4 51 60.8
TAR633G1766 Trochodendron aralioides HOM05D005516 ORTHO05D006713 8.0e-11 71.2 44 70.5
Oeu029775.1 Olea europaea HOM05D005516 ORTHO05D006713 2.3e-10 69.7 106 40.6
Sed0000674 Sechium edule HOM05D005516 ORTHO05D006713 7.1e-07 58.2 74 43.2
CBR_g28089 Chara braunii HOM05D005516 ORTHO05D006713 2.1e-06 56.6 46 50.0


User provided reference genes

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