Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.7e-185 652.5 322 100.0
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.7e-177 624.8 348 90.8
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 6.4e-161 570.9 321 88.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.7e-137 493.0 292 79.8
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 2.1e-132 476.1 310 72.6
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 9.0e-131 470.7 310 72.6
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.0e-130 469.5 253 91.3
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 7.6e-130 467.6 310 71.6
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 7.6e-130 467.6 319 69.9
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.3e-129 466.8 311 71.1
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 2.2e-129 466.1 311 71.4
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.2e-129 466.1 311 71.4
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.8e-129 465.3 310 72.3
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 3.2e-128 462.2 310 70.6
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.1e-127 459.5 310 71.9
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.1e-127 459.5 310 71.3
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 6.0e-127 458.0 310 71.9
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.3e-126 456.8 311 70.1
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 3.0e-126 455.7 310 71.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.0e-126 455.7 310 69.4
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.9e-126 455.3 310 69.4
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.1e-125 453.8 310 71.0
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.1e-125 453.8 311 68.8
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 3.3e-125 452.2 313 71.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.3e-125 452.2 317 73.2
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 5.7e-125 451.4 309 70.9
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 7.4e-125 451.1 313 70.3
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.3e-124 450.3 309 70.6
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 1.6e-124 449.9 310 68.4
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.6e-124 449.9 312 69.9
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 1.6e-124 449.9 311 68.2
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.1e-124 449.5 311 68.8
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 3.7e-124 448.7 311 68.2
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.1e-123 447.2 315 67.9
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.8e-123 446.4 310 68.4
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.8e-123 446.4 310 70.0
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.4e-123 446.0 309 70.2
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.1e-123 445.7 327 67.9
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 9.0e-123 444.1 317 66.2
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.2e-122 443.7 311 67.5
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.2e-122 443.7 313 69.3
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 5.8e-122 441.4 314 69.7
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.6e-122 441.0 308 69.2
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 1.7e-121 439.9 322 65.8
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 1.7e-121 439.9 311 67.2
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 2.2e-121 439.5 315 68.6
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 2.9e-121 439.1 311 67.2
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 2.9e-121 439.1 311 66.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 3.8e-121 438.7 311 67.2
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 3.8e-121 438.7 310 65.8
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 5.0e-121 438.3 311 67.2
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 5.0e-121 438.3 310 65.5
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 8.4e-121 437.6 311 66.6
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 8.4e-121 437.6 311 66.9
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.6e-119 433.3 311 66.6
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 2.1e-119 433.0 309 68.0
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 7.9e-119 431.0 308 67.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.3e-118 430.3 293 69.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.3e-118 429.5 312 66.3
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.3e-118 429.5 312 66.3
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 3.0e-118 429.1 312 66.3
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 5.1e-118 428.3 311 65.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.2e-116 422.9 319 65.8
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.8e-116 422.5 317 65.6
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 3.7e-116 422.2 335 63.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 4.8e-116 421.8 272 75.7
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 6.3e-116 421.4 317 65.0
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.1e-115 420.6 309 67.3
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.8e-115 419.9 317 65.3
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 1.8e-115 419.9 317 63.7
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.4e-115 419.5 317 65.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 2.4e-115 419.5 317 64.7
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 3.1e-115 419.1 314 64.0
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 3.1e-115 419.1 330 62.4
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 4.1e-115 418.7 310 64.5
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 9.0e-115 417.5 317 65.0
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 6.1e-111 404.8 312 64.1
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 9.7e-109 397.5 310 64.2
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 2.8e-108 396.0 311 60.5
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 2.8e-108 396.0 317 60.3
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 3.7e-108 395.6 274 70.8
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 4.1e-107 392.1 273 69.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.2e-106 390.6 309 60.8
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.6e-106 389.4 314 60.2
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 5.5e-104 381.7 309 60.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.1e-96 357.5 309 53.1
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 2.5e-96 356.3 313 57.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 5.5e-96 355.1 296 56.4
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 5.7e-93 345.1 234 72.2
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 9.7e-93 344.4 234 70.1
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 2.4e-91 339.7 309 55.7
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 5.9e-82 308.5 307 49.2
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.3e-81 307.4 316 49.1
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-81 307.0 307 48.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-80 303.9 315 47.3
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.5e-80 303.9 315 47.3
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-76 290.8 307 46.6
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.3e-76 290.8 319 49.5
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 4.9e-76 288.9 307 46.6
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.4e-75 287.3 257 54.5
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.4e-75 285.4 317 45.7
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-74 283.9 306 44.4
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 2.9e-73 279.6 220 61.8
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-72 277.3 306 43.8
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 3.0e-65 253.1 310 44.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.9e-65 252.7 330 40.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 5.6e-56 222.2 309 42.4
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 2.6e-53 213.4 213 49.3
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.6e-37 160.2 140 57.1
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 3.5e-26 123.2 114 51.8
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 7.4e-24 115.5 107 50.5


User provided reference genes

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