Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031818 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.3e-209 731.1 372 100.0
AUR62008891 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.0e-49 200.7 133 75.2
AUR62008893 Chenopodium quinoa HOM05D000448 ORTHO05D000313 6.5e-48 195.7 133 75.9
AUR62031816 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.5e-33 146.4 133 58.6
AUR62014923 Chenopodium quinoa HOM05D000823 ORTHO05D000004 3.0e-29 133.7 98 59.2
AUR62037797 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.1e-22 110.9 196 34.2
PSO063G6971 Papaver somniferum HOM05D000480 ORTHO05D000313 1.2e-17 95.1 140 42.1
AUR62044581 Chenopodium quinoa HOM05D000480 ORTHO05D000313 2.0e-17 94.4 135 43.0
AUR62044582 Chenopodium quinoa HOM05D000480 ORTHO05D000313 2.0e-17 94.4 135 43.0
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.0e-16 89.7 135 42.2
PSO170G3744 Papaver somniferum HOM05D000448 ORTHO05D000291 5.0e-16 89.7 141 40.4
RcHm_v2.0_Chr1g0342341 Rosa chinensis HOM05D000448 ORTHO05D000291 5.0e-16 89.7 137 38.0
COL.COLO4_10975 Corchorus olitorius HOM05D000480 ORTHO05D000313 8.5e-16 89.0 135 36.3
AUR62009254 Chenopodium quinoa HOM05D000480 ORTHO05D000313 1.1e-15 88.6 135 41.5
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.2e-15 86.7 146 37.7
CANSAT25G2306 Cannabis sativa HOM05D000448 ORTHO05D000291 5.5e-15 86.3 127 39.4
Atru.chr7.1876 Acer truncatum HOM05D000448 ORTHO05D000291 1.2e-14 85.1 117 41.9
SalBow3G2035 Salvia bowleyana HOM05D000448 ORTHO05D000291 4.7e-14 83.2 139 37.4
PSO302G0297 Papaver somniferum HOM05D000448 ORTHO05D000291 6.1e-14 82.8 141 39.0
AUR62018311 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.0e-13 82.0 108 37.0
AUR62043844 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.4e-13 81.6 144 36.1
Medtr7g099580 Medicago truncatula HOM05D000448 ORTHO05D000313 2.3e-13 80.9 140 34.3
AUR62043768 Chenopodium quinoa HOM05D000448 ORTHO05D000313 3.0e-13 80.5 134 38.8
EL10Ac1g02001 Beta vulgaris HOM05D018654 ORTHO05D018414 6.7e-13 79.3 170 27.1
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.7e-13 79.3 112 42.9
Nn8g41108 Nelumbo nucifera HOM05D000448 ORTHO05D000291 6.7e-13 79.3 136 37.5
CAN.G756.43 Capsicum annuum HOM05D000480 ORTHO05D000313 2.6e-12 77.4 135 33.3
Cpa.g.sc277.6 Carica papaya HOM05D000448 ORTHO05D000291 2.6e-12 77.4 134 35.8
CANSAT25G3158 Cannabis sativa HOM05D000448 ORTHO05D000291 7.5e-12 75.9 131 34.4
AUR62004918 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.5e-12 75.9 133 36.8
Cfa019716 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.7e-11 74.7 131 33.6
MELO3C013066.2 Cucumis melo HOM05D000448 ORTHO05D000291 3.7e-11 73.6 137 33.6
CSS0023638 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 4.8e-11 73.2 125 36.8
Thecc.03G145400 Theobroma cacao HOM05D000480 ORTHO05D000313 4.8e-11 73.2 136 34.6
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 1.4e-10 71.6 102 32.4
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.8e-10 71.2 134 35.1
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 1.8e-10 71.2 204 28.9
Oeu047502.1 Olea europaea HOM05D000448 ORTHO05D000291 1.8e-10 71.2 80 48.8
EL10Ac4g08822 Beta vulgaris HOM05D018654 ORTHO05D018414 2.4e-10 70.9 106 32.1
EL10Ac8g19514 Beta vulgaris HOM05D000448 ORTHO05D000291 2.4e-10 70.9 125 36.0
AUR62018341 Chenopodium quinoa HOM05D001698 ORTHO05D001805 3.1e-10 70.5 53 62.3
Ciclev10003826m.g Citrus clementina HOM05D000448 ORTHO05D000291 4.1e-10 70.1 123 33.3
Cpa.g.sc277.5 Carica papaya HOM05D000448 ORTHO05D000291 7.0e-10 69.3 133 32.3
AUR62030085 Chenopodium quinoa HOM05D000003 ORTHO05D013019 7.0e-10 69.3 82 37.8
CANSAT25G3728 Cannabis sativa HOM05D000480 ORTHO05D000313 9.1e-10 68.9 133 30.8
Lsat_1_v5_gn_5_29481 Lactuca sativa HOM05D000448 ORTHO05D000291 9.1e-10 68.9 130 30.8
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 9.1e-10 68.9 161 31.7
CsaV3_2G016990 Cucumis sativus L. HOM05D000448 ORTHO05D000291 1.2e-09 68.6 138 34.1
PSO210G0419 Papaver somniferum HOM05D000003 ORTHO05D001026 1.6e-09 68.2 126 29.4
HanXRQChr02g0058091 Helianthus annuus HOM05D000448 ORTHO05D000291 2.7e-09 67.4 182 28.0
Peaxi162Scf00565g00077 Petunia axillaris HOM05D000448 ORTHO05D000291 3.5e-09 67.0 95 42.1
GSVIVG01017031001 Vitis vinifera HOM05D000454 ORTHO05D002637 3.5e-09 67.0 142 30.3
Cfa021311 Carpinus fangiana HOM05D000448 ORTHO05D000291 4.5e-09 66.6 120 36.7
Haze_18750 Corylus avellana HOM05D000448 ORTHO05D000291 4.5e-09 66.6 126 34.1
PGSC0003DMG400031159 Solanum tuberosum HOM05D000480 ORTHO05D000313 5.9e-09 66.2 121 35.5
AUR62032024 Chenopodium quinoa HOM05D007611 ORTHO05D009742 7.7e-09 65.9 171 28.1
Sc23g0005320 Simmondsia chinensis HOM05D000448 ORTHO05D000291 7.7e-09 65.9 118 38.1
EL10Ac6g13973 Beta vulgaris HOM05D007772 ORTHO05D009623 1.0e-08 65.5 70 38.6
Sc23g0005330 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.0e-08 65.5 142 33.8
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-08 64.7 124 30.6
MBI01_g43189_MAGBIO Magnolia biondii HOM05D000480 ORTHO05D000313 1.7e-08 64.7 135 30.4
AUR62024369 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.2e-08 64.3 126 34.1
Glyma.13G202000 Glycine max HOM05D000448 ORTHO05D000291 2.2e-08 64.3 136 33.8
ATR0705G177 Amborella trichopoda HOM05D000480 ORTHO05D000313 2.9e-08 63.9 132 28.8
Eucgr.C03587 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.9e-08 63.9 155 32.3
Hma1.2p1_2284F.1_g318890 Hydrangea macrophylla HOM05D000448 ORTHO05D000313 2.9e-08 63.9 83 41.0
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 3.8e-08 63.5 132 29.5
Manes.09G064501 Manihot esculenta HOM05D000480 ORTHO05D000313 3.8e-08 63.5 134 33.6
EL10Ac8g18979 Beta vulgaris HOM05D000003 ORTHO05D000004 5.0e-08 63.2 113 31.9
CSS0031680 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 5.0e-08 63.2 121 33.9
SGA_v2.0_scaffold279G46783 Striga asiatica HOM05D005209 ORTHO05D006188 5.0e-08 63.2 164 26.8
Thecc.01G400000 Theobroma cacao HOM05D000480 ORTHO05D000313 6.5e-08 62.8 208 28.4
Haze_09282 Corylus avellana HOM05D000448 ORTHO05D000291 8.5e-08 62.4 116 32.8
CANSAT35G0710 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-07 62.0 121 29.8
Ciclev10003545m.g Citrus clementina HOM05D000448 ORTHO05D000291 1.1e-07 62.0 82 43.9
Eucgr.L00448 Eucalyptus grandis HOM05D000448 ORTHO05D000291 1.1e-07 62.0 134 35.1
AT1G34050 Arabidopsis thaliana HOM05D000454 ORTHO05D002637 1.9e-07 61.2 129 31.0
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 1.9e-07 61.2 80 38.8
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 1.9e-07 61.2 80 38.8
Sopen08g009070 Solanum pennellii HOM05D000448 ORTHO05D000291 1.9e-07 61.2 85 43.5
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-07 60.8 106 34.0
EL10Ac5g12276 Beta vulgaris HOM05D000480 ORTHO05D000313 2.5e-07 60.8 114 28.1
MBI14_g39030_MAGBIO Magnolia biondii HOM05D000448 ORTHO05D000313 2.5e-07 60.8 124 34.7
PSO210G1616 Papaver somniferum HOM05D000448 ORTHO05D000291 2.5e-07 60.8 109 33.9
PSO541G4138 Papaver somniferum HOM05D000003 ORTHO05D001026 2.5e-07 60.8 78 37.2
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.5e-07 60.8 113 39.8
TAR058G0001 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.5e-07 60.8 131 27.5
EL10Ac7g17811 Beta vulgaris HOM05D000448 ORTHO05D000291 3.2e-07 60.5 132 31.1
Cfa012460 Carpinus fangiana HOM05D000480 ORTHO05D000313 3.2e-07 60.5 142 28.9
AUR62005341 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.2e-07 60.5 142 26.1
Eucgr.D01210 Eucalyptus grandis HOM05D000480 ORTHO05D000313 3.2e-07 60.5 114 33.3
SalBow1G6224 Salvia bowleyana HOM05D000448 ORTHO05D000291 3.2e-07 60.5 133 32.3
vmacro03790 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 3.2e-07 60.5 116 32.8
Actinidia25362 Actinidia chinensis HOM05D000480 ORTHO05D000313 4.2e-07 60.1 141 33.3
AUR62042917 Chenopodium quinoa HOM05D007104 ORTHO05D008851 4.2e-07 60.1 53 47.2
MELO3C025814.2 Cucumis melo HOM05D000448 ORTHO05D000291 4.2e-07 60.1 82 43.9
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 4.2e-07 60.1 128 32.8
Lsat_1_v5_gn_4_101080 Lactuca sativa HOM05D000454 ORTHO05D002637 4.2e-07 60.1 107 31.8
Lsat_1_v5_gn_5_31161 Lactuca sativa HOM05D000448 ORTHO05D000291 4.2e-07 60.1 185 24.9
RcHm_v2.0_Chr6g0301391 Rosa chinensis HOM05D000003 ORTHO05D000004 4.2e-07 60.1 88 31.8
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 5.5e-07 59.7 82 35.4
AUR62003017 Chenopodium quinoa HOM05D000003 ORTHO05D000004 5.5e-07 59.7 96 34.4
Haze_08398 Corylus avellana HOM05D000480 ORTHO05D000313 5.5e-07 59.7 142 28.2
PSO541G1607 Papaver somniferum HOM05D000003 ORTHO05D001026 5.5e-07 59.7 78 30.8
EL10As7g23780 Beta vulgaris HOM05D007772 ORTHO05D009623 7.2e-07 59.3 61 37.7
Cc08_g01420 Coffea canephora HOM05D000448 ORTHO05D000291 7.2e-07 59.3 125 32.8
Cc08_g01450 Coffea canephora HOM05D000448 ORTHO05D000291 7.2e-07 59.3 126 31.7
Haze_18751 Corylus avellana HOM05D000448 ORTHO05D000291 7.2e-07 59.3 123 33.3
FvH4_4g16971 Fragaria vesca HOM05D000003 ORTHO05D000004 7.2e-07 59.3 108 23.1
Manes.09G064600 Manihot esculenta HOM05D000480 ORTHO05D000313 7.2e-07 59.3 141 31.9
Medtr7g021090 Medicago truncatula HOM05D000480 ORTHO05D000313 7.2e-07 59.3 143 28.0
PSO063G0367 Papaver somniferum HOM05D000480 ORTHO05D000313 7.2e-07 59.3 135 30.4
Sc09g0010010 Simmondsia chinensis HOM05D000448 ORTHO05D000291 7.2e-07 59.3 137 32.1
TAR346G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000004 7.2e-07 59.3 85 37.6
Actinidia08293 Actinidia chinensis HOM05D000264 ORTHO05D000152 9.4e-07 58.9 135 28.9
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 9.4e-07 58.9 135 31.1
FvH4_6g20980 Fragaria vesca HOM05D017784 ORTHO05D006737 9.4e-07 58.9 103 31.1
Hma1.2p1_0231F.1_g097550 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 9.4e-07 58.9 77 42.9
Lsat_1_v5_gn_4_101120 Lactuca sativa HOM05D000454 ORTHO05D002637 9.4e-07 58.9 110 30.9
Nn1g05267 Nelumbo nucifera HOM05D000448 ORTHO05D000291 9.4e-07 58.9 135 31.9
PSO017G1014 Papaver somniferum HOM05D000003 ORTHO05D001026 9.4e-07 58.9 127 27.6
PSO357G0561 Papaver somniferum HOM05D000003 ORTHO05D001026 9.4e-07 58.9 128 28.1
PSO421G0589 Papaver somniferum HOM05D009007 ORTHO05D000291 9.4e-07 58.9 142 32.4
ATR0705G094 Amborella trichopoda HOM05D000454 ORTHO05D002637 1.2e-06 58.5 136 31.6
Aqoxy7G02881 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.2e-06 58.5 135 29.6
BraA04t17757Z Brassica rapa HOM05D000003 ORTHO05D000283 1.2e-06 58.5 81 34.6
CiPaw.11G073300 Carya illinoinensis HOM05D000480 ORTHO05D000313 1.2e-06 58.5 142 28.2
AUR62001038 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.2e-06 58.5 79 45.6
Haze_18135 Corylus avellana HOM05D000448 ORTHO05D000291 1.2e-06 58.5 134 32.1
Migut.J01111 Erythranthe guttata HOM05D003621 ORTHO05D004259 1.2e-06 58.5 106 36.8
Gorai.011G252600 Gossypium raimondii HOM05D000480 ORTHO05D000313 1.2e-06 58.5 142 26.8
Hma1.2p1_0672F.1_g200820 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 1.2e-06 58.5 75 45.3
TAR374G0158 Trochodendron aralioides HOM05D000480 ORTHO05D000313 1.2e-06 58.5 135 28.9
Atru.chr1.2620 Acer truncatum HOM05D000003 ORTHO05D000004 1.6e-06 58.2 173 23.1
Carub.0001s3214 Capsella rubella HOM05D000454 ORTHO05D002637 1.6e-06 58.2 129 28.7
MBI02_g29974_MAGBIO Magnolia biondii HOM05D000480 ORTHO05D000313 1.6e-06 58.2 106 40.6
PSO782G5603 Papaver somniferum HOM05D008740 ORTHO05D006738 1.6e-06 58.2 75 34.7
TAR256G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.6e-06 58.2 102 28.4
EL10Ac1g01308 Beta vulgaris HOM05D000003 ORTHO05D000167 2.1e-06 57.8 78 28.2
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.1e-06 57.8 128 29.7
CSS0025223 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.1e-06 57.8 172 27.9
AUR62024837 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.1e-06 57.8 33 66.7
AUR62027744 Chenopodium quinoa HOM05D000638 ORTHO05D002641 2.1e-06 57.8 52 53.8
Ca_26580_v3 Cicer arietinum L. HOM05D000480 ORTHO05D000313 2.1e-06 57.8 142 27.5
PSO063G6787 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-06 57.8 128 25.8
PSO339G0681 Papaver somniferum HOM05D000003 ORTHO05D001026 2.1e-06 57.8 78 29.5
Peaxi162Scf00565g00065 Petunia axillaris HOM05D000448 ORTHO05D000291 2.1e-06 57.8 75 44.0
TAR023G0002 Trochodendron aralioides HOM05D000480 ORTHO05D000313 2.1e-06 57.8 135 28.1
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 57.4 106 32.1
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.7e-06 57.4 126 31.7
Actinidia04482 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.7e-06 57.4 126 29.4
Ah.16g105930 Amaranthus hybridus HOM05D000448 ORTHO05D000291 2.7e-06 57.4 160 28.8
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 2.7e-06 57.4 182 24.7
EL10Ac1g01950 Beta vulgaris HOM05D000003 ORTHO05D000004 2.7e-06 57.4 97 29.9
CsaV3_6G032090 Cucumis sativus L. HOM05D039891 ORTHO05D000291 2.7e-06 57.4 113 38.9
Eucgr.C03399 Eucalyptus grandis HOM05D000448 ORTHO05D000291 2.7e-06 57.4 116 33.6
SalBow1G1441 Salvia bowleyana HOM05D000448 ORTHO05D000291 2.7e-06 57.4 159 30.8
Aa31LG3G18440 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.6e-06 57.0 138 29.7
EL10Ac6g14227 Beta vulgaris HOM05D000003 ORTHO05D000004 3.6e-06 57.0 109 23.9
CiPaw.11G073200 Carya illinoinensis HOM05D000480 ORTHO05D000313 3.6e-06 57.0 142 26.8
PSO541G2940 Papaver somniferum HOM05D000003 ORTHO05D001026 3.6e-06 57.0 109 30.3
PSO675G9045 Papaver somniferum HOM05D000003 ORTHO05D000004 3.6e-06 57.0 128 26.6
PSO675G9151 Papaver somniferum HOM05D000003 ORTHO05D001026 3.6e-06 57.0 78 30.8
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 4.7e-06 56.6 125 29.6
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 4.7e-06 56.6 80 30.0
AUR62009257 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.7e-06 56.6 90 34.4
AUR62019523 Chenopodium quinoa HOM05D007611 ORTHO05D004365 4.7e-06 56.6 28 71.4
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 4.7e-06 56.6 90 34.4
PSO832G1269 Papaver somniferum HOM05D007919 ORTHO05D006738 4.7e-06 56.6 93 29.0
TAR536G0009 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.7e-06 56.6 111 29.7
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 6.1e-06 56.2 126 27.8
CsaV3_3G023710 Cucumis sativus L. HOM05D000454 ORTHO05D002637 6.1e-06 56.2 137 31.4
Dinv26275 Davidia involucrata HOM05D000723 ORTHO05D001760 6.1e-06 56.2 112 31.2
PSO210G3208 Papaver somniferum HOM05D009007 ORTHO05D000291 6.1e-06 56.2 117 30.8
SalBow1G1747 Salvia bowleyana HOM05D000448 ORTHO05D000291 6.1e-06 56.2 104 32.7
Ah.16g107500 Amaranthus hybridus HOM05D007611 ORTHO05D009742 8.0e-06 55.8 78 33.3
BcaC02g08539 Brassica carinata HOM05D000454 ORTHO05D002637 8.0e-06 55.8 146 30.1
C04p53190 Brassica napus HOM05D000454 ORTHO05D002637 8.0e-06 55.8 146 30.1
BolC4t26875H Brassica oleracea HOM05D000454 ORTHO05D002637 8.0e-06 55.8 146 30.1
BraA09t38388Z Brassica rapa HOM05D000480 ORTHO05D000313 8.0e-06 55.8 135 28.9
Cc11_g07220 Coffea canephora HOM05D000264 ORTHO05D000152 8.0e-06 55.8 135 29.6
Lj6g0001178 Lotus japonicus HOM05D000003 ORTHO05D000004 8.0e-06 55.8 103 31.1
Medtr8g068990 Medicago truncatula HOM05D000480 ORTHO05D000313 8.0e-06 55.8 133 27.8
PSO210G1725 Papaver somniferum HOM05D000003 ORTHO05D001026 8.0e-06 55.8 109 32.1


User provided reference genes

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