Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 4.5e-70 267.7 126 100.0
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 2.7e-62 241.9 160 76.9
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 2.6e-49 198.7 135 73.3
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 2.1e-43 179.1 135 67.4
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 8.1e-35 150.6 134 57.5
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 2.6e-33 145.6 141 51.8
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 5.8e-33 144.4 138 54.3
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 2.4e-31 139.0 141 51.8
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.6e-30 136.3 138 51.4
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 1.6e-30 136.3 138 51.4
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 2.1e-30 136.0 110 60.0
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.1e-30 136.0 110 60.0
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 2.7e-30 135.6 117 58.1
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 3.5e-30 135.2 125 56.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 3.5e-30 135.2 124 56.5
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 4.6e-30 134.8 128 53.9
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 4.6e-30 134.8 138 52.9
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 6.0e-30 134.4 139 52.5
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 6.0e-30 134.4 139 52.5
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 7.8e-30 134.0 119 56.3
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.0e-29 133.7 110 61.8
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 1.3e-29 133.3 136 50.7
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 1.7e-29 132.9 124 54.8
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.7e-29 132.9 110 59.1
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.7e-29 132.9 143 50.3
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.7e-29 132.9 145 51.0
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 2.3e-29 132.5 143 50.3
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.3e-29 132.5 138 50.0
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 2.3e-29 132.5 131 51.9
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 3.0e-29 132.1 145 49.7
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 3.0e-29 132.1 131 51.9
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 5.1e-29 131.3 138 50.7
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 5.1e-29 131.3 139 49.6
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 6.6e-29 131.0 143 49.7
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 6.6e-29 131.0 140 51.4
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 6.6e-29 131.0 141 51.8
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 6.6e-29 131.0 133 52.6
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 6.6e-29 131.0 138 50.7
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 6.6e-29 131.0 130 54.6
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 6.6e-29 131.0 119 53.8
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 8.6e-29 130.6 139 51.8
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 8.6e-29 130.6 140 51.4
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 1.1e-28 130.2 139 51.1
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 1.5e-28 129.8 134 51.5
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 1.9e-28 129.4 133 53.4
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 1.9e-28 129.4 115 56.5
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 1.9e-28 129.4 114 55.3
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.3e-28 127.5 107 60.7
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 9.6e-28 127.1 136 51.5
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 9.6e-28 127.1 114 55.3
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 1.2e-27 126.7 122 51.6
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.6e-27 126.3 121 55.4
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 1.6e-27 126.3 120 55.0
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 1.6e-27 126.3 136 53.7
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 2.1e-27 125.9 139 49.6
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 2.1e-27 125.9 106 60.4
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 2.8e-27 125.6 118 54.2
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 2.8e-27 125.6 115 56.5
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 4.7e-27 124.8 129 51.9
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 4.7e-27 124.8 143 48.3
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 4.7e-27 124.8 117 54.7
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 6.2e-27 124.4 120 51.7
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 6.2e-27 124.4 125 52.8
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 6.2e-27 124.4 104 61.5
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 8.1e-27 124.0 116 52.6
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 1.1e-26 123.6 139 48.9
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 1.1e-26 123.6 133 51.9
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.4e-26 123.2 111 57.7
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 1.8e-26 122.9 130 51.5
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 1.8e-26 122.9 122 53.3
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 1.8e-26 122.9 108 58.3
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.4e-26 122.5 106 57.5
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 3.1e-26 122.1 109 57.8
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 5.2e-26 121.3 141 48.9
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 5.2e-26 121.3 141 48.9
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 6.8e-26 120.9 108 58.3
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 1.5e-25 119.8 120 51.7
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 2.0e-25 119.4 114 53.5
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 2.6e-25 119.0 128 49.2
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 3.4e-25 118.6 106 57.5
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 4.4e-25 118.2 92 66.3
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 5.8e-25 117.9 119 55.5
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 5.8e-25 117.9 149 45.6
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 7.6e-25 117.5 125 51.2
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 9.9e-25 117.1 122 52.5
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 1.3e-24 116.7 119 53.8
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 1.7e-24 116.3 124 50.8
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 2.2e-24 115.9 118 53.4
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.2e-24 115.9 111 53.2
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 2.9e-24 115.5 99 59.6
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 3.8e-24 115.2 97 58.8
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 3.8e-24 115.2 97 58.8
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 4.9e-24 114.8 138 47.1
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 6.4e-24 114.4 102 56.9
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 6.4e-24 114.4 117 53.8
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 8.4e-24 114.0 113 50.4
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.1e-23 113.6 120 48.3
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 1.1e-23 113.6 127 52.8
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 1.1e-23 113.6 132 52.3
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 1.9e-23 112.8 113 55.8
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 2.4e-23 112.5 131 50.4
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 4.2e-23 111.7 122 48.4
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 4.2e-23 111.7 91 60.4
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 1.2e-22 110.2 129 45.0
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.6e-22 109.8 111 51.4
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 2.1e-22 109.4 88 63.6
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 3.5e-22 108.6 95 55.8
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 3.5e-22 108.6 130 46.9
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 4.6e-22 108.2 64 75.0
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 7.8e-22 107.5 113 51.3
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 7.8e-22 107.5 100 55.0
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 1.7e-21 106.3 121 47.9
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 2.3e-21 105.9 62 74.2
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 3.0e-21 105.5 105 52.4
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 3.0e-21 105.5 120 48.3
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 1.1e-20 103.6 188 35.1
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 1.5e-20 103.2 59 78.0
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.5e-20 102.4 77 64.9
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 5.6e-20 101.3 84 58.3
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.6e-19 99.8 142 42.3
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 3.6e-19 98.6 116 50.0
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 3.1e-18 95.5 50 80.0
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 7.6e-17 90.9 107 49.5
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 9.9e-17 90.5 51 74.5
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 1.3e-16 90.1 61 63.9
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 2.9e-16 89.0 111 47.7
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 4.9e-16 88.2 60 61.7
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 1.1e-15 87.0 113 45.1
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 5.4e-15 84.7 91 56.0
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 2.7e-14 82.4 94 53.2
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 6.0e-14 81.3 165 35.8
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 1.0e-13 80.5 81 51.9
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.3e-13 79.3 90 52.2
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 2.3e-13 79.3 90 52.2
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 5.1e-13 78.2 53 62.3
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 1.5e-12 76.6 50 62.0
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 1.6e-11 73.2 85 51.8
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 2.1e-11 72.8 49 61.2
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 4.8e-11 71.6 118 40.7
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 6.2e-11 71.2 140 34.3
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 8.1e-11 70.9 39 79.5
EL10Ac2g02749 Beta vulgaris HOM05D001327 ORTHO05D002270 2.4e-10 69.3 107 43.0
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 3.1e-10 68.9 66 54.5
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 9.9e-09 63.9 103 45.6
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 1.9e-07 59.7 89 41.6
CBR_g39054 Chara braunii HOM05D004542 ORTHO05D005380 2.4e-07 59.3 121 31.4
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 2.4e-07 59.3 62 48.4
Ah.15g093720 Amaranthus hybridus HOM05D000143 ORTHO05D000072 2.7e-06 55.8 26 92.3
SEGI_34151 Sequoiadendron giganteum HOM05D004542 ORTHO05D005380 2.7e-06 55.8 105 37.1
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 3.5e-06 55.5 48 56.2


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