Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031719 Chenopodium quinoa HOM05D006834 ORTHO05D008623 1.3e-191 672.9 358 100.0
AUR62032606 Chenopodium quinoa HOM05D006834 ORTHO05D008623 3.8e-178 628.2 435 80.9
AUR62001071 Chenopodium quinoa HOM05D006834 ORTHO05D008623 2.4e-177 625.5 435 80.9
EL10Ac9g22392 Beta vulgaris HOM05D006834 ORTHO05D008623 1.8e-111 406.8 436 56.7
Ah.12g061380 Amaranthus hybridus HOM05D006834 ORTHO05D008623 5.0e-106 388.7 430 55.6
Atru.chr5.848 Acer truncatum HOM05D006834 ORTHO05D008623 5.8e-86 322.0 435 47.6
Duzib138G0585 Durio zibethinus HOM05D006834 ORTHO05D008623 2.7e-83 313.2 407 47.4
PGR042G0322 Punica granatum HOM05D006834 ORTHO05D008623 7.8e-83 311.6 407 46.7
GSVIVG01028237001 Vitis vinifera HOM05D006834 ORTHO05D008623 7.8e-83 311.6 435 45.5
Dinv12076 Davidia involucrata HOM05D006834 ORTHO05D008623 2.3e-82 310.1 380 48.2
Sabra02G0148600 Salix brachista HOM05D006834 ORTHO05D008623 8.6e-82 308.1 441 42.9
QL12p035081 Quercus lobata HOM05D006834 ORTHO05D008623 3.3e-81 306.2 410 45.9
QL12p035100 Quercus lobata HOM05D006834 ORTHO05D008623 3.3e-81 306.2 410 45.9
Ciclev10020225m.g Citrus clementina HOM05D006834 ORTHO05D008623 1.1e-79 301.2 402 45.5
Potri.002G186100 Populus trichocarpa HOM05D006834 ORTHO05D008623 2.3e-79 300.1 408 43.9
CSS0011680 Camellia sinensis var. sinensis HOM05D006834 ORTHO05D008623 3.1e-79 299.7 448 43.3
Cpa.g.sc57.31 Carica papaya HOM05D006834 ORTHO05D008623 6.8e-79 298.5 403 43.9
TWI14G0919 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 9.8e-78 294.7 424 44.1
Eucgr.A00997 Eucalyptus grandis HOM05D006834 ORTHO05D008623 1.3e-77 294.3 429 42.0
TAR636G0448 Trochodendron aralioides HOM05D006834 ORTHO05D008623 6.4e-77 292.0 408 43.9
MD09G1291400 Malus domestica HOM05D006834 ORTHO05D008623 1.1e-76 291.2 435 43.2
vmacro15952 Vaccinium macrocarpon HOM05D006834 ORTHO05D008623 1.1e-76 291.2 435 42.8
Lalb_Chr18g0046351 Lupinus albus HOM05D006834 ORTHO05D008623 7.0e-76 288.5 368 46.5
Gohir.A12G119200 Gossypium hirsutum HOM05D006834 ORTHO05D008623 9.2e-76 288.1 440 42.3
TWI59G0932 Tripterygium wilfordii HOM05D006834 ORTHO05D008623 9.2e-76 288.1 421 43.7
Cfa004921 Carpinus fangiana HOM05D006834 ORTHO05D008623 4.6e-75 285.8 438 42.7
Gorai.008G133900 Gossypium raimondii HOM05D006834 ORTHO05D008623 6.0e-75 285.4 440 41.8
Medtr7g110820 Medicago truncatula HOM05D006834 ORTHO05D008623 8.6e-74 281.6 387 43.9
Aqoxy2G02436 Aquilegia oxysepala HOM05D006834 ORTHO05D008623 1.1e-73 281.2 424 41.5
Nn4g25303 Nelumbo nucifera HOM05D006834 ORTHO05D008623 1.1e-73 281.2 435 41.6
Sed0016094 Sechium edule HOM05D006834 ORTHO05D008623 1.1e-73 281.2 422 42.7
Psat3g017400 Pisum sativum HOM05D006834 ORTHO05D008623 1.5e-73 280.8 427 41.5
Rhsim01G0000800 Rhododendron simsii HOM05D006834 ORTHO05D008623 1.5e-73 280.8 434 41.9
ClCG01G007130 Citrullus lanatus HOM05D006834 ORTHO05D008623 2.5e-73 280.0 415 43.4
Lj1g0008019 Lotus japonicus HOM05D006834 ORTHO05D008623 3.3e-73 279.6 374 44.9
TPR.G8370 Trifolium pratense HOM05D006834 ORTHO05D008623 5.6e-73 278.9 368 45.1
Actinidia21334 Actinidia chinensis HOM05D006834 ORTHO05D008623 1.6e-72 277.3 440 40.0
CsaV3_5G017580 Cucumis sativus L. HOM05D006834 ORTHO05D008623 2.1e-72 276.9 421 43.0
MBI18_g03845_MAGBIO Magnolia biondii HOM05D006834 ORTHO05D008623 2.1e-72 276.9 381 44.9
Nitab4.5_0007915g0010 Nicotiana tabacum HOM05D006834 ORTHO05D008623 4.7e-72 275.8 439 39.9
Phvul.001G218900 Phaseolus vulgaris HOM05D006834 ORTHO05D008623 4.7e-72 275.8 404 42.8
CANSAT25G0194 Cannabis sativa HOM05D006834 ORTHO05D008623 1.4e-71 274.2 365 45.8
A09p54180 Brassica napus HOM05D006834 ORTHO05D008623 6.8e-71 271.9 417 41.0
Carub.0005s2883 Capsella rubella HOM05D006834 ORTHO05D008623 8.9e-71 271.6 425 40.2
CiPaw.08G082000 Carya illinoinensis HOM05D006834 ORTHO05D008623 8.9e-71 271.6 440 41.6
Glyma.19G222100 Glycine max HOM05D006834 ORTHO05D008623 8.9e-71 271.6 363 44.9
Nitab4.5_0003092g0080 Nicotiana tabacum HOM05D006834 ORTHO05D008623 8.9e-71 271.6 417 40.0
CDE01G0777 Ceratophyllum demersum HOM05D006834 ORTHO05D008623 1.5e-70 270.8 314 46.8
AT3G62080 Arabidopsis thaliana HOM05D006834 ORTHO05D008623 2.6e-70 270.0 432 40.7
VMungo1383G1632 Vigna mungo HOM05D006834 ORTHO05D008623 2.6e-70 270.0 414 42.0
Sopen01g030580 Solanum pennellii HOM05D006834 ORTHO05D008623 3.4e-70 269.6 425 39.8
AL5G44760 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 4.4e-70 269.2 432 40.7
CARHR172420 Cardamine hirsuta HOM05D006834 ORTHO05D008623 4.4e-70 269.2 432 39.8
PGSC0003DMG401001116 Solanum tuberosum HOM05D006834 ORTHO05D008623 5.8e-70 268.9 425 39.1
BraA09t40830Z Brassica rapa HOM05D006834 ORTHO05D008623 9.9e-70 268.1 417 40.8
C08p37040 Brassica napus HOM05D006834 ORTHO05D008623 1.3e-69 267.7 417 40.8
Aa31LG10G16050 Aethionema arabicum HOM05D006834 ORTHO05D008623 1.1e-68 264.6 430 39.5
BolC8t51281H Brassica oleracea HOM05D006834 ORTHO05D008623 1.1e-68 264.6 417 40.3
Manes.05G007900 Manihot esculenta HOM05D006834 ORTHO05D008623 3.2e-68 263.1 322 49.1
ATR0796G131 Amborella trichopoda HOM05D006834 ORTHO05D008623 1.2e-67 261.2 383 41.5
Lsat_1_v5_gn_8_167261 Lactuca sativa HOM05D006834 ORTHO05D008623 1.6e-67 260.8 403 40.9
PSO210G3353 Papaver somniferum HOM05D006834 ORTHO05D008623 1.6e-67 260.8 369 43.4
AL5G44880 Arabidopsis lyrata HOM05D006834 ORTHO05D008623 2.1e-67 260.4 411 40.6
Thecc.01G326600 Theobroma cacao HOM05D006834 ORTHO05D008623 4.6e-67 259.2 302 52.3
Cc01_g21740 Coffea canephora HOM05D006834 ORTHO05D008623 6.0e-67 258.8 416 39.2
Thhalv10005996m.g Eutrema salsugineum HOM05D006834 ORTHO05D008623 7.8e-67 258.5 417 40.3
Haze_05159 Corylus avellana HOM05D006834 ORTHO05D008623 1.0e-66 258.1 437 41.2
PSO761G0283 Papaver somniferum HOM05D006834 ORTHO05D008623 2.3e-66 256.9 426 39.4
Sp5g01290 Schrenkiella parvula HOM05D006834 ORTHO05D008623 1.1e-65 254.6 432 39.1
CAN.G179.29 Capsicum annuum HOM05D006834 ORTHO05D008623 1.9e-65 253.8 434 38.0
MELO3C005199.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.3e-65 252.7 425 40.7
COL.COLO4_23116 Corchorus olitorius HOM05D006834 ORTHO05D008623 9.5e-65 251.5 302 52.6
Hma1.2p1_0408F.1_g146240 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 6.2e-64 248.8 295 51.5
BcaC07g40700 Brassica carinata HOM05D006834 ORTHO05D008623 1.2e-62 244.6 417 39.1
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 1.2e-62 244.6 388 40.7
arahy.Tifrunner.gnm1.ann1.AJ9Z2K Arachis hypogaea HOM05D006834 ORTHO05D008623 7.6e-62 241.9 430 37.7
FAN19G1238 Fragaria x ananassa HOM05D006834 ORTHO05D008623 1.3e-61 241.1 383 40.2
HanXRQChr06g0167961 Helianthus annuus HOM05D006834 ORTHO05D008623 1.3e-61 241.1 420 38.6
THA.LOC104817424 Tarenaya hassleriana HOM05D006834 ORTHO05D008623 1.3e-61 241.1 436 36.7
FvH4_1g26150 Fragaria vesca HOM05D006834 ORTHO05D008623 5.4e-60 235.7 383 39.9
FAN23G1444 Fragaria x ananassa HOM05D006834 ORTHO05D008623 5.4e-60 235.7 387 39.3
Oeu008276.1 Olea europaea HOM05D006834 ORTHO05D008623 1.2e-59 234.6 465 34.4
RcHm_v2.0_Chr3g0485641 Rosa chinensis HOM05D006834 ORTHO05D008623 1.6e-59 234.2 356 40.2
FAN26G0527 Fragaria x ananassa HOM05D006834 ORTHO05D008623 2.7e-59 233.4 439 37.4
arahy.Tifrunner.gnm1.ann1.W0LIHS Arachis hypogaea HOM05D006834 ORTHO05D008623 4.6e-59 232.6 456 35.5
MSTRG.21731 Avicennia marina HOM05D006834 ORTHO05D008623 6.0e-59 232.3 402 36.6
Gohir.D12G123000 Gossypium hirsutum HOM05D006834 ORTHO05D008623 3.0e-58 229.9 312 47.4
SGA_v2.0_scaffold310G48195 Striga asiatica HOM05D006834 ORTHO05D008623 3.0e-58 229.9 426 35.4
Ca_09251_v3 Cicer arietinum L. HOM05D006834 ORTHO05D008623 1.8e-55 220.7 298 45.0
Prupe.3G001500 Prunus persica HOM05D006834 ORTHO05D008623 2.6e-54 216.9 260 52.7
Migut.D01683 Erythranthe guttata HOM05D006834 ORTHO05D008623 4.2e-52 209.5 304 44.4
HPP92_001172 Vanilla planifolia HOM05D006834 ORTHO05D008623 3.6e-48 196.4 228 49.6
Zm00001eb129510 Zea mays HOM05D006834 ORTHO05D008623 7.6e-46 188.7 343 34.1
Pp3c3_29200 Physcomitrium patens HOM05D006834 ORTHO05D008623 2.8e-40 170.2 376 29.5
SMO339G0071 Selaginella moellendorffii HOM05D006834 ORTHO05D008623 6.2e-40 169.1 390 30.0
Mapoly0053s0040 Marchantia polymorpha HOM05D006834 ORTHO05D008623 8.1e-40 168.7 387 30.7
Os01g0286000 Oryza sativa ssp. japonica HOM05D006834 ORTHO05D008623 9.0e-39 165.2 399 30.8
DCAR_012294 Daucus carota HOM05D006834 ORTHO05D008623 1.5e-38 164.5 398 31.9
Peaxi162Scf00309g00622 Petunia axillaris HOM05D006834 ORTHO05D008623 3.4e-38 163.3 218 47.2
Sc05g0000050 Simmondsia chinensis HOM05D006834 ORTHO05D008623 5.5e-28 129.4 207 38.2
Solyc01g079060.4 Solanum lycopersicum HOM05D006834 ORTHO05D008623 2.0e-22 110.9 201 31.3
MELO3C033776.2 Cucumis melo HOM05D006834 ORTHO05D008623 4.8e-16 89.7 66 57.6
MELO3C032404.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.4e-15 88.2 54 64.8
Hma1.2p1_1735F.1_g299880 Hydrangea macrophylla HOM05D006834 ORTHO05D008623 4.1e-15 86.7 67 58.2
Peaxi162Scf00309g00627 Petunia axillaris HOM05D006834 ORTHO05D008623 4.1e-15 86.7 162 34.0
MELO3C005268.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.3e-13 81.6 61 57.4
MELO3C028884.2 Cucumis melo HOM05D006834 ORTHO05D008623 1.0e-10 72.0 109 41.3
CBR_g12374 Chara braunii HOM05D006834 ORTHO05D008623 2.4e-07 60.8 247 27.5
Sc05g0000060 Simmondsia chinensis HOM05D006834 ORTHO05D008623 5.3e-07 59.7 100 40.0
HPP92_010139 Vanilla planifolia HOM05D006834 ORTHO05D008623 1.5e-06 58.2 81 45.7


User provided reference genes

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