Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.7e-82 307.8 150 100.0
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 6.8e-57 224.2 118 89.0
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.4e-49 199.1 107 83.2
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.5e-35 152.5 190 47.9
AUR62020516 Chenopodium quinoa HOM05D000462 ORTHO05D005846 3.2e-30 135.6 72 90.3
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 2.6e-24 115.9 111 49.5
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.5e-22 109.4 115 45.2
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 4.2e-22 108.6 121 43.8
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 9.3e-22 107.5 115 45.2
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.0e-20 104.0 96 49.0
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.3e-20 102.8 112 50.9
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 3.0e-20 102.4 117 47.0
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 6.7e-20 101.3 105 43.8
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 8.7e-20 100.9 118 41.5
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.1e-19 100.5 102 48.0
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.3e-19 99.0 116 42.2
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.3e-19 99.0 116 42.2
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 9.7e-19 97.4 116 41.4
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 2.8e-18 95.9 102 42.2
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 6.9e-17 91.3 116 38.8
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 9.0e-17 90.9 108 42.6
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 2.0e-16 89.7 101 42.6
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 5.9e-16 88.2 120 36.7
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 1.3e-15 87.0 102 45.1
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 1.3e-15 87.0 102 46.1
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 1.7e-15 86.7 142 42.3
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 2.9e-15 85.9 102 43.1
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 2.9e-15 85.9 104 44.2
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 3.8e-15 85.5 102 41.2
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 5.0e-15 85.1 102 45.1
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 5.0e-15 85.1 104 41.3
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 8.5e-15 84.3 140 40.0
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 8.5e-15 84.3 108 38.0
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.4e-14 83.6 124 36.3
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 3.2e-14 82.4 102 45.1
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 5.5e-14 81.6 120 32.5
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 5.5e-14 81.6 103 42.7
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.2e-13 80.5 103 41.7
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 1.6e-13 80.1 107 37.4
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 1.6e-13 80.1 108 40.7
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 2.1e-13 79.7 140 37.9
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 2.1e-13 79.7 102 41.2
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 2.1e-13 79.7 103 42.7
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 2.7e-13 79.3 117 35.0
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 3.6e-13 79.0 104 43.3
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 3.6e-13 79.0 105 36.2
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 4.6e-13 78.6 103 41.7
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 4.6e-13 78.6 102 38.2
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 6.1e-13 78.2 103 42.7
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 1.0e-12 77.4 105 36.2
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 1.0e-12 77.4 140 32.9
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 1.0e-12 77.4 108 35.2
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-12 77.0 103 40.8
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 1.8e-12 76.6 104 38.5
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 2.3e-12 76.3 102 37.3
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.3e-12 76.3 117 34.2
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 2.3e-12 76.3 104 40.4
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.3e-12 76.3 104 40.4
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 2.3e-12 76.3 105 37.1
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 3.0e-12 75.9 140 37.1
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 3.9e-12 75.5 94 39.4
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 3.9e-12 75.5 103 39.8
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 3.9e-12 75.5 101 36.6
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 5.1e-12 75.1 118 38.1
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 5.1e-12 75.1 104 40.4
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 5.1e-12 75.1 102 37.3
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 5.1e-12 75.1 92 43.5
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 6.7e-12 74.7 109 38.5
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 6.7e-12 74.7 106 40.6
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 8.8e-12 74.3 118 38.1
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 8.8e-12 74.3 119 37.0
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-11 73.6 104 39.4
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 1.5e-11 73.6 102 40.2
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 1.9e-11 73.2 97 40.2
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 1.9e-11 73.2 105 35.2
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 1.9e-11 73.2 102 40.2
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 2.5e-11 72.8 104 37.5
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 2.5e-11 72.8 113 36.3
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.5e-11 72.8 97 38.1
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.5e-11 72.8 97 38.1
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 3.3e-11 72.4 102 38.2
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 3.3e-11 72.4 104 37.5
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 4.3e-11 72.0 101 36.6
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 5.7e-11 71.6 102 37.3
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 5.7e-11 71.6 105 38.1
AUR62036576 Chenopodium quinoa HOM05D022531 ORTHO05D028403 7.4e-11 71.2 94 42.6
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 9.7e-11 70.9 80 43.8
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 1.7e-10 70.1 114 31.6
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 1.7e-10 70.1 99 39.4
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.8e-10 68.6 92 43.5
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 6.3e-10 68.2 97 40.2
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 6.3e-10 68.2 118 35.6
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 8.2e-10 67.8 89 43.8
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 1.4e-09 67.0 107 32.7
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 2.4e-09 66.2 97 37.1
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 4.1e-09 65.5 99 38.4
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 5.3e-09 65.1 96 34.4
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.2e-08 63.9 105 37.1
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 1.2e-08 63.9 105 37.1
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 1.5e-08 63.5 118 33.1
Manes.07G115300 Manihot esculenta HOM05D000395 ORTHO05D000088 2.6e-08 62.8 147 29.9
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 3.4e-08 62.4 95 36.8
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 4.5e-08 62.0 71 43.7
QL11p039160 Quercus lobata HOM05D000395 ORTHO05D000088 4.5e-08 62.0 101 34.7
COL.COLO4_30629 Corchorus olitorius HOM05D000395 ORTHO05D000088 7.7e-08 61.2 115 33.0
Duzib248G0282 Durio zibethinus HOM05D000823 ORTHO05D009132 1.7e-07 60.1 93 37.6
SEGI_02922 Sequoiadendron giganteum HOM05D000823 ORTHO05D005846 1.7e-07 60.1 90 33.3
PSO170G5993 Papaver somniferum HOM05D000823 ORTHO05D000088 2.2e-07 59.7 106 32.1
SEGI_18580 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.2e-07 59.7 102 31.4
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 2.9e-07 59.3 103 32.0
MD02G1160300 Malus domestica HOM05D000395 ORTHO05D000088 3.8e-07 58.9 102 35.3
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 3.8e-07 58.9 70 44.3
PSO017G0811 Papaver somniferum HOM05D000823 ORTHO05D000088 3.8e-07 58.9 98 33.7
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 5.0e-07 58.5 113 37.2
Eucgr.H02901 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.0e-07 58.5 98 32.7
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 6.5e-07 58.2 69 46.4
PSO339G0204 Papaver somniferum HOM05D000395 ORTHO05D000088 6.5e-07 58.2 100 31.0
arahy.Tifrunner.gnm1.ann1.28CQXC Arachis hypogaea HOM05D000395 ORTHO05D000088 8.5e-07 57.8 104 33.7
PSO675G6904 Papaver somniferum HOM05D000395 ORTHO05D000088 8.5e-07 57.8 108 33.3
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 8.5e-07 57.8 104 35.6
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 1.1e-06 57.4 70 44.3
Gohir.A12G068300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.1e-06 57.4 106 35.8
CANSAT01G1838 Cannabis sativa HOM05D000395 ORTHO05D000088 1.4e-06 57.0 103 33.0
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.4e-06 57.0 80 40.0
RhsimUnG0104500 Rhododendron simsii HOM05D000395 ORTHO05D000088 1.4e-06 57.0 102 36.3
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 1.4e-06 57.0 110 29.1
TAR628G1113 Trochodendron aralioides HOM05D000395 ORTHO05D000088 1.9e-06 56.6 105 36.2
Lj6g0021528 Lotus japonicus HOM05D000395 ORTHO05D000088 2.5e-06 56.2 118 33.9
Rhsim02G0221100 Rhododendron simsii HOM05D000395 ORTHO05D000088 2.5e-06 56.2 102 33.3
Cpa.g.sc132.62 Carica papaya HOM05D000395 ORTHO05D000088 4.2e-06 55.5 105 36.2
Gohir.D12G068100 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.2e-06 55.5 106 34.9
Gorai.008G071600 Gossypium raimondii HOM05D000395 ORTHO05D000088 4.2e-06 55.5 106 34.9
TWI09G0601 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 4.2e-06 55.5 104 37.5
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 5.5e-06 55.1 61 44.3
Peaxi162Scf00016g01343 Petunia axillaris HOM05D000823 ORTHO05D000088 5.5e-06 55.1 122 32.8
CANSAT01G2675 Cannabis sativa HOM05D000395 ORTHO05D000088 7.2e-06 54.7 96 39.6
Gorai.013G245600 Gossypium raimondii HOM05D000395 ORTHO05D000088 7.2e-06 54.7 106 34.0
Lj3g0025473 Lotus japonicus HOM05D000395 ORTHO05D000088 7.2e-06 54.7 98 33.7
COL.COLO4_03592 Corchorus olitorius HOM05D000395 ORTHO05D000088 9.4e-06 54.3 115 30.4
FvH4_2g40640 Fragaria vesca HOM05D000823 ORTHO05D000088 9.4e-06 54.3 120 30.0
Gohir.D12G067800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.4e-06 54.3 102 30.4
Gohir.D12G067900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.4e-06 54.3 102 34.3
Gorai.008G071200 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.4e-06 54.3 102 30.4
Gorai.008G071300 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.4e-06 54.3 102 34.3
Lj1g0013794 Lotus japonicus HOM05D000395 ORTHO05D000088 9.4e-06 54.3 101 30.7
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 9.4e-06 54.3 99 36.4


User provided reference genes

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