Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 3.4e-239 831.2 414 100.0
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 5.2e-232 807.4 414 96.1
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.9e-194 682.6 420 82.4
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 1.8e-160 569.7 430 71.2
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 3.5e-159 565.5 412 71.8
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 1.5e-146 523.5 415 65.1
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 1.5e-146 523.5 411 65.0
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 3.4e-146 522.3 396 65.4
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 3.4e-146 522.3 413 64.4
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 9.8e-146 520.8 398 65.1
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 7.0e-144 514.6 404 65.6
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 2.0e-143 513.1 373 69.4
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 2.0e-143 513.1 393 67.2
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 1.0e-142 510.8 410 64.6
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 2.9e-142 509.2 400 66.0
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 3.8e-142 508.8 354 72.0
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 5.0e-142 508.4 376 68.9
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 6.5e-142 508.1 395 67.6
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 1.1e-141 507.3 427 63.0
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.1e-141 507.3 406 64.3
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 2.5e-141 506.1 376 68.1
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 5.5e-141 505.0 359 70.5
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 7.2e-141 504.6 361 69.8
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 2.7e-140 502.7 403 64.3
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 3.6e-140 502.3 398 66.6
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 4.7e-140 501.9 355 69.9
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 4.7e-140 501.9 399 64.7
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 6.1e-140 501.5 403 65.5
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 8.0e-140 501.1 361 69.8
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 4.0e-139 498.8 400 64.5
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 4.0e-139 498.8 402 64.4
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 1.5e-138 496.9 376 65.7
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 1.5e-138 496.9 366 69.4
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 2.6e-138 496.1 382 66.8
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 4.4e-138 495.4 425 61.9
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 5.7e-138 495.0 392 65.1
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 5.7e-138 495.0 353 69.4
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 7.5e-138 494.6 356 69.7
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 9.8e-138 494.2 399 65.4
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 9.8e-138 494.2 380 66.3
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.3e-137 493.8 387 63.3
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 2.2e-137 493.0 354 69.5
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 2.2e-137 493.0 425 61.6
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 4.9e-137 491.9 400 65.5
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 6.3e-137 491.5 445 58.0
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 8.3e-137 491.1 403 63.3
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 1.6e-135 486.9 362 66.9
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 3.5e-135 485.7 354 68.9
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 1.0e-134 484.2 382 64.9
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 1.9e-133 479.9 344 72.7
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.5e-133 479.6 358 68.2
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 2.5e-133 479.6 354 68.4
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 2.5e-133 479.6 424 59.7
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 3.3e-133 479.2 425 61.4
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 3.3e-133 479.2 356 66.9
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 3.3e-133 479.2 400 63.5
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 4.3e-133 478.8 401 61.3
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 6.1e-132 474.9 361 67.6
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 8.0e-132 474.6 352 66.5
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.4e-131 473.8 355 64.8
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 1.4e-131 473.8 433 57.0
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 3.0e-131 472.6 354 64.7
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 3.0e-131 472.6 459 57.3
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 4.4e-130 468.8 423 56.7
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 4.4e-130 468.8 373 60.6
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 4.4e-130 468.8 373 60.6
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 5.7e-130 468.4 342 69.6
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 1.3e-129 467.2 369 61.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 4.9e-129 465.3 354 63.0
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 6.4e-129 464.9 354 63.0
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 6.4e-129 464.9 359 63.2
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 1.4e-128 463.8 409 59.9
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 3.2e-128 462.6 354 62.7
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 1.6e-127 460.3 360 62.8
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.0e-127 459.9 425 60.2
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 1.7e-126 456.8 363 64.5
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 3.0e-126 456.1 348 67.2
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.9e-125 453.4 361 65.4
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 1.9e-125 453.4 335 66.6
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.5e-125 453.0 410 60.0
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 2.5e-125 453.0 312 71.5
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.2e-124 450.7 353 65.2
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 2.8e-124 449.5 341 65.4
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 3.6e-124 449.1 420 57.1
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 6.2e-124 448.4 352 64.8
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 3.1e-123 446.0 423 57.0
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 3.1e-123 446.0 352 65.6
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 8.3e-121 438.0 397 59.7
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.1e-120 437.6 313 68.7
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 1.5e-114 417.2 316 66.8
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 3.7e-113 412.5 319 65.5
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 8.1e-108 394.8 321 61.1
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 2.9e-105 386.3 351 55.8
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 6.4e-105 385.2 358 56.1
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.1e-104 384.4 271 68.6
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.5e-101 374.0 358 53.6
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 6.4e-97 358.6 357 52.1
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 7.6e-90 335.1 281 60.5
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.8e-84 315.8 363 48.2
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 1.4e-80 304.3 257 63.4
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.2e-80 303.1 425 46.1
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 2.7e-79 300.1 252 57.5
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 4.6e-79 299.3 187 79.7
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 2.1e-68 263.8 212 64.6
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 6.3e-68 262.3 413 38.3
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 6.3e-68 262.3 413 38.3
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 1.1e-67 261.5 183 68.3
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 3.1e-67 260.0 367 41.7
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.5e-66 256.1 409 37.4
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 5.5e-56 222.6 515 30.3
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 9.4e-56 221.9 342 41.8
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 3.8e-49 199.9 210 49.5
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 6.1e-47 192.6 361 36.8
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 4.0e-38 163.3 158 50.0
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 6.5e-33 146.0 128 53.9
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 2.3e-30 137.5 115 56.5
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 8.3e-20 102.4 186 37.1
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 3.1e-19 100.5 73 67.1
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.7e-18 97.4 175 35.4
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.9e-17 94.0 156 35.3
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 1.1e-16 92.0 62 74.2
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 1.1e-16 92.0 65 67.7
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.3e-16 89.4 169 33.1
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.8e-15 87.4 169 32.5
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 2.4e-11 74.3 61 52.5
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 7.0e-11 72.8 53 71.7


User provided reference genes

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