Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031609 Chenopodium quinoa HOM05D051631 ORTHO05D000074 1.2e-115 419.9 206 100.0
AUR62034386 Chenopodium quinoa HOM05D051631 ORTHO05D000074 1.3e-58 230.3 193 64.2
EL10Ac2g02955 Beta vulgaris HOM05D000151 ORTHO05D000074 4.1e-52 208.8 236 51.3
Ah.10g031420 Amaranthus hybridus HOM05D000151 ORTHO05D000074 1.7e-45 186.8 236 46.6
ECA246G4358 Erigeron canadensis HOM05D000151 ORTHO05D000074 8.6e-18 94.7 188 32.4
HanXRQChr15g0477851 Helianthus annuus HOM05D000151 ORTHO05D000074 8.0e-16 88.2 182 32.4
Dinv08540 Davidia involucrata HOM05D000151 ORTHO05D000074 4.9e-13 79.0 171 29.2
Sabra05G0086100 Salix brachista HOM05D000151 ORTHO05D000074 1.1e-12 77.8 147 33.3
Lj2A488T12 Lonicera japonica HOM05D000151 ORTHO05D000074 2.4e-12 76.6 161 28.0
EL10Ac9g22285 Beta vulgaris HOM05D000151 ORTHO05D000074 3.2e-12 76.3 170 32.4
Manes.01G152400 Manihot esculenta HOM05D000151 ORTHO05D000074 3.2e-12 76.3 164 29.3
Aqoxy7G00902 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.2e-12 74.7 161 30.4
QL06p052345 Quercus lobata HOM05D000151 ORTHO05D000074 9.2e-12 74.7 171 33.9
QL06p052352 Quercus lobata HOM05D000151 ORTHO05D000074 9.2e-12 74.7 165 33.9
Lsat_1_v5_gn_3_47300 Lactuca sativa HOM05D004423 ORTHO05D005464 1.2e-11 74.3 174 28.7
QL06p052362 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-11 74.3 162 33.3
PSO541G6252 Papaver somniferum HOM05D000151 ORTHO05D000074 1.6e-11 73.9 173 28.9
Sabra09G0108800 Salix brachista HOM05D000151 ORTHO05D000074 2.0e-11 73.6 174 31.0
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-11 73.2 206 29.1
Sabra04G0121100 Salix brachista HOM05D000151 ORTHO05D000074 3.5e-11 72.8 201 31.8
Lj2g0017165 Lotus japonicus HOM05D000151 ORTHO05D000074 4.6e-11 72.4 86 43.0
Eucgr.J02501 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.0e-11 72.0 173 31.2
Eucgr.J02503 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.8e-11 71.6 165 32.7
DCAR_022831 Daucus carota HOM05D000151 ORTHO05D000074 1.7e-10 70.5 170 31.2
Potri.004G179685 Populus trichocarpa HOM05D000151 ORTHO05D000074 3.0e-10 69.7 209 30.1
Potri.009G140000 Populus trichocarpa HOM05D000151 ORTHO05D000074 3.0e-10 69.7 119 33.6
CsaV3_6G012680 Cucumis sativus L. HOM05D000151 ORTHO05D000074 5.0e-10 68.9 181 30.4
Ciclev10028612m.g Citrus clementina HOM05D000151 ORTHO05D000074 6.6e-10 68.6 180 31.1
MELO3C013657.2 Cucumis melo HOM05D000151 ORTHO05D000074 8.6e-10 68.2 181 30.4
PSO675G1630 Papaver somniferum HOM05D000151 ORTHO05D000074 8.6e-10 68.2 173 28.3
TWI79G0440 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.1e-09 67.8 207 28.0
Sabra05G0086300 Salix brachista HOM05D000151 ORTHO05D000074 1.5e-09 67.4 182 28.6
ClCG00G001890 Citrullus lanatus HOM05D000151 ORTHO05D000074 1.9e-09 67.0 159 32.1
ClCG02G011070 Citrullus lanatus HOM05D000151 ORTHO05D000074 1.9e-09 67.0 159 32.1
Potri.005G105400 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.3e-09 65.9 178 30.3
AUR62039088 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.3e-09 65.1 172 29.7
Gohir.D04G169400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 7.3e-09 65.1 114 34.2
Ca_14458_v3 Cicer arietinum L. HOM05D000151 ORTHO05D000074 9.5e-09 64.7 161 28.0
CSS0014442 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.2e-08 64.3 173 31.2
Medtr3g029800 Medicago truncatula HOM05D000151 ORTHO05D000074 1.2e-08 64.3 152 32.9
Potri.005G105000 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.2e-08 64.3 174 27.0
Gohir.A04G132412 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.1e-08 63.5 114 33.3
Lj1g0026720 Lotus japonicus HOM05D000151 ORTHO05D000074 2.1e-08 63.5 81 42.0
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 2.8e-08 63.2 173 27.7
Haze_03687 Corylus avellana HOM05D000151 ORTHO05D000074 2.8e-08 63.2 178 31.5
Rhsim05G0073700 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.6e-08 62.8 106 40.6
Rhsim05G0163200 Rhododendron simsii HOM05D001789 ORTHO05D001755 3.6e-08 62.8 128 31.2
Rhsim05G0163300 Rhododendron simsii HOM05D001789 ORTHO05D001755 3.6e-08 62.8 128 31.2
TPR.G35490 Trifolium pratense HOM05D002941 ORTHO05D007802 3.6e-08 62.8 86 40.7
Gohir.D04G169200 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.7e-08 62.4 167 29.3
Gorai.012G157500 Gossypium raimondii HOM05D000151 ORTHO05D000074 4.7e-08 62.4 110 33.6
Gorai.012G157200 Gossypium raimondii HOM05D000151 ORTHO05D000074 8.1e-08 61.6 167 29.3
Medtr3g030080 Medicago truncatula HOM05D000151 ORTHO05D000074 1.1e-07 61.2 140 32.9
Potri.005G105200 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.1e-07 61.2 184 29.3
Rhsim02G0106100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.1e-07 61.2 125 35.2
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.4e-07 60.8 177 28.8
Medtr3g029920 Medicago truncatula HOM05D000151 ORTHO05D000074 1.4e-07 60.8 137 31.4
Sed0002173 Sechium edule HOM05D000151 ORTHO05D000074 1.4e-07 60.8 183 30.6
FvH4_1g10830 Fragaria vesca HOM05D000151 ORTHO05D000074 1.8e-07 60.5 173 30.6
Nitab4.5_0003585g0020 Nicotiana tabacum HOM05D001876 ORTHO05D000074 1.8e-07 60.5 204 25.5
Cpa.g.sc20.134 Carica papaya HOM05D000151 ORTHO05D000074 2.3e-07 60.1 194 25.8
Thecc.02G052700 Theobroma cacao HOM05D000151 ORTHO05D000074 2.3e-07 60.1 163 28.8
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 3.1e-07 59.7 173 27.2
AT2G17036 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 3.1e-07 59.7 173 25.4
TPR.G9359 Trifolium pratense HOM05D000151 ORTHO05D000074 3.1e-07 59.7 81 44.4
CiPaw.07G005500 Carya illinoinensis HOM05D000151 ORTHO05D000074 5.2e-07 58.9 182 30.8
Duzib052G1153 Durio zibethinus HOM05D000151 ORTHO05D000074 5.2e-07 58.9 106 34.0
Lalb_Chr25g0283041 Lupinus albus HOM05D000151 ORTHO05D000074 5.2e-07 58.9 163 28.8
THA.LOC104819663 Tarenaya hassleriana HOM05D000151 ORTHO05D000074 5.2e-07 58.9 178 29.8
AUR62010299 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.8e-07 58.5 176 29.0
Duzib132G0179 Durio zibethinus HOM05D000151 ORTHO05D000074 6.8e-07 58.5 163 27.6
Peaxi162Scf00442g00626 Petunia axillaris HOM05D000151 ORTHO05D000074 6.8e-07 58.5 154 28.6
Medtr1g049170 Medicago truncatula HOM05D000151 ORTHO05D000074 1.2e-06 57.8 141 30.5
Rhsim05G0163400 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.2e-06 57.8 98 33.7
CAN.G890.12 Capsicum annuum HOM05D000151 ORTHO05D000074 1.5e-06 57.4 130 25.4
FAN26G2643 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-06 57.4 171 29.2
vmacro17118 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.5e-06 57.4 176 29.0
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 2.0e-06 57.0 146 29.5
SHI05785 Sapria himalayana HOM05D000151 ORTHO05D000074 2.0e-06 57.0 113 31.9
Lj2g0007850 Lotus japonicus HOM05D000151 ORTHO05D000074 2.6e-06 56.6 115 33.0
Medtr3g029650 Medicago truncatula HOM05D000151 ORTHO05D000074 2.6e-06 56.6 156 30.8
Cfa007042 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.4e-06 56.2 163 30.7
Manes.01G152500 Manihot esculenta HOM05D000151 ORTHO05D000074 3.4e-06 56.2 173 28.3
COL.COLO4_18005 Corchorus olitorius HOM05D000151 ORTHO05D000074 4.4e-06 55.8 110 33.6
Medtr6g027040 Medicago truncatula HOM05D000151 ORTHO05D000074 4.4e-06 55.8 156 26.9
Psat3g058240 Pisum sativum HOM05D000151 ORTHO05D000074 4.4e-06 55.8 79 41.8
Sopen02g027950 Solanum pennellii HOM05D000151 ORTHO05D000074 4.4e-06 55.8 193 27.5
Carub.0003s3095 Capsella rubella HOM05D000151 ORTHO05D000074 5.8e-06 55.5 173 27.7
Cfa007041 Carpinus fangiana HOM05D002155 ORTHO05D002215 5.8e-06 55.5 109 38.5
Haze_03688 Corylus avellana HOM05D002155 ORTHO05D002215 7.5e-06 55.1 163 30.7
Medtr2g047180 Medicago truncatula HOM05D000151 ORTHO05D000074 7.5e-06 55.1 130 29.2
TPR.G5724 Trifolium pratense HOM05D000151 ORTHO05D000074 7.5e-06 55.1 82 43.9
AL3G49860 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 9.9e-06 54.7 176 23.9


User provided reference genes

Program Settings