Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62031237 Chenopodium quinoa HOM05D006807 ORTHO05D008528 7.6e-85 317.4 191 100.0
AUR62020868 Chenopodium quinoa HOM05D003431 ORTHO05D005152 2.5e-11 73.2 87 56.3
AUR62018551 Chenopodium quinoa HOM05D003431 ORTHO05D005152 3.2e-11 72.8 87 55.2
EL10Ac3g07449 Beta vulgaris HOM05D003431 ORTHO05D005152 1.5e-08 63.9 87 43.7
AUR62025746 Chenopodium quinoa HOM05D006807 ORTHO05D008528 2.8e-07 59.7 54 55.6
Glyma.15G048200 Glycine max HOM05D003431 ORTHO05D005152 4.8e-07 58.9 87 40.2
Hma1.2p1_0014F.1_g010020 Hydrangea macrophylla HOM05D006807 ORTHO05D008528 4.8e-07 58.9 32 71.9
SalBow6G0908 Salvia bowleyana HOM05D003431 ORTHO05D005152 6.3e-07 58.5 87 42.5
CiPaw.11G013300 Carya illinoinensis HOM05D006807 ORTHO05D008528 8.3e-07 58.2 32 75.0
Nitab4.5_0001360g0080 Nicotiana tabacum HOM05D006807 ORTHO05D008528 8.3e-07 58.2 32 71.9
Nitab4.5_0002531g0140 Nicotiana tabacum HOM05D006807 ORTHO05D008528 8.3e-07 58.2 32 71.9
Peaxi162Scf00089g00837 Petunia axillaris HOM05D006807 ORTHO05D008528 8.3e-07 58.2 55 50.9
Phvul.006G212200 Phaseolus vulgaris HOM05D003431 ORTHO05D005152 8.3e-07 58.2 88 43.2
VMungo0540G2199 Vigna mungo HOM05D003431 ORTHO05D005152 8.3e-07 58.2 87 42.5
EL10Ac7g18054 Beta vulgaris HOM05D006807 ORTHO05D008528 1.1e-06 57.8 32 75.0
Haze_07288 Corylus avellana HOM05D006807 ORTHO05D008528 1.4e-06 57.4 32 71.9
AUR62001264 Chenopodium quinoa HOM05D006807 ORTHO05D008528 1.8e-06 57.0 54 53.7
Ciclev10020730m.g Citrus clementina HOM05D006807 ORTHO05D008528 1.8e-06 57.0 32 68.8
Eucgr.B00162 Eucalyptus grandis HOM05D006807 ORTHO05D008528 1.8e-06 57.0 32 68.8
Glyma.08G184300 Glycine max HOM05D003431 ORTHO05D005152 1.8e-06 57.0 87 40.2
Nitab4.5_0010140g0020 Nicotiana tabacum HOM05D003431 ORTHO05D005152 1.8e-06 57.0 87 41.4
Gohir.D12G190500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 2.4e-06 56.6 32 65.6
Gorai.008G204300 Gossypium raimondii HOM05D006807 ORTHO05D008528 2.4e-06 56.6 32 65.6
Medtr2g007780 Medicago truncatula HOM05D003431 ORTHO05D005152 2.4e-06 56.6 87 41.4
Oeu026055.1 Olea europaea HOM05D003431 ORTHO05D005152 2.4e-06 56.6 87 39.1
TAR371G0294 Trochodendron aralioides HOM05D006807 ORTHO05D008528 2.4e-06 56.6 54 50.0
Atru.chr9.992 Acer truncatum HOM05D006807 ORTHO05D008528 3.1e-06 56.2 32 65.6
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea HOM05D003431 ORTHO05D005152 3.1e-06 56.2 87 37.9
TPR.G39937 Trifolium pratense HOM05D003431 ORTHO05D005152 3.1e-06 56.2 87 43.7
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea HOM05D003431 ORTHO05D005152 4.1e-06 55.8 87 36.8
FAN04G1904 Fragaria x ananassa HOM05D003431 ORTHO05D005152 4.1e-06 55.8 87 40.2
Solyc03g111600.4 Solanum lycopersicum HOM05D006807 ORTHO05D008528 4.1e-06 55.8 32 68.8
Sopen03g030720 Solanum pennellii HOM05D006807 ORTHO05D008528 4.1e-06 55.8 32 68.8
CSS0006665 Camellia sinensis var. sinensis HOM05D003431 ORTHO05D005152 5.4e-06 55.5 87 39.1
Cc02_g22270 Coffea canephora HOM05D003431 ORTHO05D005152 5.4e-06 55.5 87 39.1
Oeu000195.1 Olea europaea HOM05D003431 ORTHO05D005152 5.4e-06 55.5 87 39.1
Psat1g220040 Pisum sativum HOM05D003431 ORTHO05D005152 5.4e-06 55.5 87 41.4
CSS0019908 Camellia sinensis var. sinensis HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
CANSAT80G1796 Cannabis sativa HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
Dinv11117 Davidia involucrata HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
FvH4_5g07080 Fragaria vesca HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
FvH4_5g30060 Fragaria vesca HOM05D003431 ORTHO05D005152 9.1e-06 54.7 87 39.1
FAN04G0573 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
FAN08G1325 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
FAN08G2387 Fragaria x ananassa HOM05D003431 ORTHO05D005152 9.1e-06 54.7 87 39.1
FAN13G1098 Fragaria x ananassa HOM05D003431 ORTHO05D005152 9.1e-06 54.7 87 39.1
FAN18G1423 Fragaria x ananassa HOM05D003431 ORTHO05D005152 9.1e-06 54.7 87 39.1
FAN18G3349 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
Gohir.A12G187500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 62.5
Os12g0279600 Oryza sativa ssp. japonica HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 62.5
Prupe.5G159400 Prunus persica HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
QL10p005592 Quercus lobata HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
RcHm_v2.0_Chr7g0191471 Rosa chinensis HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9
Hund18532 Selenicereus undatus HOM05D006807 ORTHO05D008528 9.1e-06 54.7 32 71.9


User provided reference genes

Program Settings