Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.1e-139 500.0 263 100.0
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 2.2e-82 309.7 292 61.3
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.8e-81 306.6 224 75.4
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.4e-76 290.4 291 59.5
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.4e-73 279.6 219 74.4
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.4e-65 253.8 238 61.3
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.6e-64 250.4 221 64.7
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.0e-64 250.0 212 65.6
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.0e-64 250.0 210 66.2
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.7e-64 249.6 235 60.9
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.0e-63 247.7 226 64.6
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 2.9e-63 246.1 250 57.2
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 2.9e-63 246.1 216 62.0
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 3.8e-63 245.7 215 62.8
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 5.0e-63 245.4 223 62.8
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 5.0e-63 245.4 215 63.3
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 8.6e-63 244.6 254 57.9
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.1e-62 244.2 215 63.3
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 3.3e-62 242.7 231 61.0
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 3.3e-62 242.7 226 61.1
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 4.3e-62 242.3 200 68.0
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 9.5e-62 241.1 199 63.3
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 9.5e-62 241.1 211 62.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 9.5e-62 241.1 211 62.1
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.2e-61 240.7 229 59.0
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 1.2e-61 240.7 218 62.4
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.1e-61 240.0 196 67.3
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 2.1e-61 240.0 219 60.7
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 2.8e-61 239.6 248 56.9
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 6.1e-61 238.4 216 61.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 6.1e-61 238.4 191 68.6
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 1.4e-60 237.3 226 58.8
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.8e-60 236.9 250 55.6
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.3e-60 236.5 243 56.4
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 4.0e-60 235.7 222 61.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 8.9e-60 234.6 188 64.9
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 8.9e-60 234.6 200 64.0
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.6e-59 233.0 191 66.0
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 2.6e-59 233.0 213 62.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 3.4e-59 232.6 218 61.0
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 4.4e-59 232.3 219 61.6
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.4e-59 232.3 208 61.1
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 5.7e-59 231.9 214 61.7
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 7.5e-59 231.5 201 62.7
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 7.5e-59 231.5 201 62.7
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.3e-58 230.7 221 61.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.7e-58 230.3 228 57.0
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 2.2e-58 229.9 181 68.0
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 2.9e-58 229.6 299 50.5
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.9e-58 229.6 260 54.2
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.9e-58 229.6 197 63.5
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 8.3e-58 228.0 233 55.4
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 1.1e-57 227.6 198 63.1
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 1.1e-57 227.6 259 54.1
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.4e-57 226.5 231 55.8
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 2.4e-57 226.5 250 53.6
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 7.0e-57 224.9 261 51.7
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 7.0e-57 224.9 186 65.1
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 9.2e-57 224.6 223 57.8
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.6e-56 223.8 262 50.4
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 1.6e-56 223.8 221 59.7
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.0e-56 223.4 261 51.3
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 3.5e-56 222.6 185 64.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 3.5e-56 222.6 190 62.6
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 7.8e-56 221.5 261 52.5
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 7.8e-56 221.5 222 59.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 7.8e-56 221.5 192 65.1
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 3.9e-55 219.2 220 58.2
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 3.9e-55 219.2 215 59.1
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 5.0e-55 218.8 257 52.9
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 8.6e-55 218.0 207 58.0
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.1e-54 217.6 201 60.2
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.5e-54 217.2 202 62.4
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.9e-54 216.9 186 64.0
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 1.9e-54 216.9 216 59.3
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 2.5e-54 216.5 181 64.6
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.5e-54 216.5 202 60.4
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 3.3e-54 216.1 230 56.5
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 7.3e-54 214.9 192 64.1
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.3e-54 214.9 202 61.4
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 1.2e-53 214.2 220 57.7
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 1.2e-53 214.2 223 56.5
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.2e-53 214.2 248 50.4
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.6e-53 213.8 197 59.4
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.6e-53 213.8 192 63.5
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.7e-53 212.2 256 53.9
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 4.7e-53 212.2 219 55.7
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 4.7e-53 212.2 259 47.5
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 6.2e-53 211.8 216 55.6
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 3.1e-52 209.5 268 48.1
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 2.6e-51 206.5 295 46.8
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 3.4e-51 206.1 288 47.6
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 4.4e-51 205.7 263 50.2
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 5.8e-51 205.3 191 60.7
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 9.8e-51 204.5 254 50.4
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.7e-50 203.8 254 50.8
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 3.7e-50 202.6 183 60.7
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.9e-50 202.2 226 54.9
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 1.9e-49 200.3 184 58.7
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 3.2e-49 199.5 242 49.6
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 7.0e-49 198.4 208 53.4
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 6.0e-48 195.3 153 68.0
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 7.8e-48 194.9 222 55.0
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 7.8e-48 194.9 215 55.8
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.0e-47 194.5 161 65.2
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 1.9e-46 190.3 183 58.5
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 1.6e-45 187.2 221 48.4
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.8e-45 186.4 206 52.9
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 3.6e-45 186.0 136 75.0
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 6.2e-45 185.3 221 48.0
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 1.1e-44 184.5 152 65.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 2.0e-43 180.3 280 43.9
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.4e-41 174.1 204 53.9
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 9.2e-41 171.4 218 50.5
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 7.8e-40 168.3 254 44.9
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 7.8e-40 168.3 164 59.1
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 3.0e-39 166.4 203 52.2
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 3.3e-38 162.9 159 59.7
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 3.4e-35 152.9 124 68.5
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 5.8e-35 152.1 114 72.8
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.4e-33 147.5 218 48.2
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 2.7e-32 143.3 238 41.2
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.7e-31 140.6 114 68.4
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 8.7e-31 138.3 231 41.6
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 5.6e-30 135.6 208 45.7
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 2.6e-27 126.7 180 42.2
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.2e-24 117.9 156 46.2
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 1.3e-21 107.8 96 62.5
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.2e-19 101.3 211 37.9
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 9.3e-17 91.7 200 35.0
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.6e-16 90.9 68 67.6
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.3e-15 87.0 183 32.8
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 2.3e-15 87.0 183 32.8
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 3.0e-15 86.7 94 51.1
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 3.7e-13 79.7 84 50.0
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 2.4e-09 67.0 141 36.9
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 7.1e-09 65.5 66 54.5
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 6.0e-08 62.4 69 50.7
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-07 61.2 68 50.0
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 2.5e-06 57.0 183 32.2


User provided reference genes

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