Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030986 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.2e-98 363.2 193 100.0
AUR62030987 Chenopodium quinoa HOM05D011779 ORTHO05D014917 1.1e-86 323.6 185 94.6
AUR62030988 Chenopodium quinoa HOM05D011779 ORTHO05D014917 7.6e-85 317.4 173 96.5
AUR62008232 Chenopodium quinoa HOM05D011779 ORTHO05D014917 3.0e-81 305.4 187 86.1
AUR62008233 Chenopodium quinoa HOM05D011779 ORTHO05D014917 3.9e-81 305.1 187 85.6
AUR62008236 Chenopodium quinoa HOM05D011779 ORTHO05D014917 3.9e-81 305.1 187 85.6
EL10Ac4g09594 Beta vulgaris HOM05D011779 ORTHO05D014917 1.4e-62 243.4 193 67.4
EL10Ac5g10782 Beta vulgaris HOM05D011779 ORTHO05D014917 5.3e-62 241.5 183 67.8
EL10Ac5g10780 Beta vulgaris HOM05D011779 ORTHO05D014917 2.6e-61 239.2 183 66.7
EL10Ac5g10779 Beta vulgaris HOM05D011779 ORTHO05D014917 7.7e-61 237.7 180 67.2
EL10Ac3g05775 Beta vulgaris HOM05D011779 ORTHO05D014917 4.2e-59 231.9 179 67.6
EL10Ac4g09254 Beta vulgaris HOM05D011779 ORTHO05D014917 6.1e-58 228.0 173 67.1
EL10Ac4g09255 Beta vulgaris HOM05D011779 ORTHO05D014917 6.1e-58 228.0 173 67.1
AUR62005137 Chenopodium quinoa HOM05D011779 ORTHO05D137585 3.4e-40 169.1 184 52.2
AUR62038735 Chenopodium quinoa HOM05D011779 ORTHO05D137918 7.0e-38 161.4 189 46.6
AUR62020643 Chenopodium quinoa HOM05D011779 ORTHO05D137858 4.5e-37 158.7 188 47.9
Haze_13849 Corylus avellana HOM05D000281 ORTHO05D000290 2.7e-13 79.7 179 26.8
Cfa008206 Carpinus fangiana HOM05D000281 ORTHO05D000290 4.6e-13 79.0 184 29.9
Cfa008207 Carpinus fangiana HOM05D000281 ORTHO05D000290 2.3e-12 76.6 184 29.9
Oeu028536.1 Olea europaea HOM05D000281 ORTHO05D000290 5.1e-12 75.5 188 25.5
Dinv28555 Davidia involucrata HOM05D000281 ORTHO05D000290 2.5e-11 73.2 165 26.1
Lj1P982T31 Lonicera japonica HOM05D000281 ORTHO05D000290 2.5e-11 73.2 189 26.5
CiPaw.05G217500 Carya illinoinensis HOM05D000281 ORTHO05D000290 3.3e-11 72.8 185 27.6
CiPaw.05G218400 Carya illinoinensis HOM05D000281 ORTHO05D000290 2.8e-10 69.7 176 27.3
Potri.012G127400 Populus trichocarpa HOM05D000281 ORTHO05D000290 4.7e-10 68.9 188 27.7
MBI12_g40384_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 1.4e-09 67.4 201 24.4
Peaxi162Scf01013g00016 Petunia axillaris HOM05D000281 ORTHO05D000290 2.3e-09 66.6 197 27.4
TAR374G0916 Trochodendron aralioides HOM05D000281 ORTHO05D000290 2.3e-09 66.6 192 28.6
Haze_13856 Corylus avellana HOM05D000281 ORTHO05D000290 3.1e-09 66.2 133 33.8
MBI12_g20409_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 3.1e-09 66.2 201 24.4
FAN06G1663 Fragaria x ananassa HOM05D000281 ORTHO05D000290 6.8e-09 65.1 164 25.0
PGSC0003DMG400027617 Solanum tuberosum HOM05D000281 ORTHO05D000290 6.8e-09 65.1 194 26.3
Migut.O00299 Erythranthe guttata HOM05D000281 ORTHO05D000290 1.5e-08 63.9 193 25.4
QL09p019270 Quercus lobata HOM05D000281 ORTHO05D000290 2.6e-08 63.2 170 25.3
RcHm_v2.0_Chr1g0374711 Rosa chinensis HOM05D000281 ORTHO05D000290 2.6e-08 63.2 157 25.5
Solyc11g019910.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 3.4e-08 62.8 194 25.3
CAN.G152.3 Capsicum annuum HOM05D000281 ORTHO05D000290 4.4e-08 62.4 162 25.9
Hma1.2p1_0654F.1_g196640 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 4.4e-08 62.4 160 28.1
Peaxi162Scf00241g00053 Petunia axillaris HOM05D000281 ORTHO05D000290 4.4e-08 62.4 188 26.6
TAR629G0898 Trochodendron aralioides HOM05D000281 ORTHO05D000290 4.4e-08 62.4 180 27.2
DCAR_018096 Daucus carota HOM05D000281 ORTHO05D000290 5.8e-08 62.0 182 29.7
MELO3C006821.2 Cucumis melo HOM05D000281 ORTHO05D000290 7.6e-08 61.6 174 24.1
MBI04_g11450_MAGBIO Magnolia biondii HOM05D000281 ORTHO05D000290 7.6e-08 61.6 162 26.5
Manes.01G074850 Manihot esculenta HOM05D000281 ORTHO05D000290 7.6e-08 61.6 180 26.7
TAR374G1720 Trochodendron aralioides HOM05D000281 ORTHO05D000290 7.6e-08 61.6 184 25.0
CsaV3_3G016230 Cucumis sativus L. HOM05D000281 ORTHO05D000290 1.3e-07 60.8 176 25.0
Lsat_1_v5_gn_6_90680 Lactuca sativa HOM05D000281 ORTHO05D000290 1.3e-07 60.8 176 25.6
Lsat_1_v5_gn_2_128861 Lactuca sativa HOM05D000281 ORTHO05D000290 1.7e-07 60.5 193 24.4
Nn6g34063 Nelumbo nucifera HOM05D000281 ORTHO05D000290 1.7e-07 60.5 159 27.0
Lj8C40T5 Lonicera japonica HOM05D000281 ORTHO05D000290 2.2e-07 60.1 187 25.1
Actinidia25017 Actinidia chinensis HOM05D000281 ORTHO05D000290 2.9e-07 59.7 133 27.1
FvH4_7g27850 Fragaria vesca HOM05D000281 ORTHO05D000290 2.9e-07 59.7 187 25.7
FAN06G2202 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.9e-07 59.7 187 25.7
FAN06G3115 Fragaria x ananassa HOM05D000281 ORTHO05D000290 2.9e-07 59.7 187 25.7
Hma1.2p1_0654F.1_g196605 Hydrangea macrophylla HOM05D000281 ORTHO05D000290 2.9e-07 59.7 182 26.4
Manes.01G074925 Manihot esculenta HOM05D000281 ORTHO05D000290 2.9e-07 59.7 180 26.1
Atru.chr1.678 Acer truncatum HOM05D000281 ORTHO05D000290 3.7e-07 59.3 169 25.4
ClCG05G007400 Citrullus lanatus HOM05D000036 ORTHO05D000095 3.7e-07 59.3 165 26.1
FAN03G3274 Fragaria x ananassa HOM05D000137 ORTHO05D000290 3.7e-07 59.3 166 24.7
FAN10G1748 Fragaria x ananassa HOM05D000281 ORTHO05D000290 3.7e-07 59.3 187 25.7
Psat7g193360 Pisum sativum HOM05D000281 ORTHO05D000290 4.9e-07 58.9 190 25.8
RcHm_v2.0_Chr1g0374721 Rosa chinensis HOM05D000281 ORTHO05D000290 4.9e-07 58.9 180 23.9
PGSC0003DMG400010815 Solanum tuberosum HOM05D000281 ORTHO05D000290 4.9e-07 58.9 163 25.8
Thecc.03G258300 Theobroma cacao HOM05D000281 ORTHO05D000290 4.9e-07 58.9 159 25.2
Ah.07g207800 Amaranthus hybridus HOM05D000281 ORTHO05D000290 6.4e-07 58.5 165 24.2
AT5G62350 Arabidopsis thaliana HOM05D000281 ORTHO05D000290 6.4e-07 58.5 195 26.2
Haze_26052 Corylus avellana HOM05D000281 ORTHO05D007047 6.4e-07 58.5 171 31.0
Sopen03g023520 Solanum pennellii HOM05D000281 ORTHO05D000290 6.4e-07 58.5 197 25.4
THA.LOC104821406 Tarenaya hassleriana HOM05D000281 ORTHO05D000290 6.4e-07 58.5 192 26.6
CAN.G152.6 Capsicum annuum HOM05D000281 ORTHO05D000290 1.1e-06 57.8 188 24.5
ECA238G0978 Erigeron canadensis HOM05D000281 ORTHO05D000290 1.1e-06 57.8 129 27.1
Manes.14G034600 Manihot esculenta HOM05D000281 ORTHO05D000290 1.1e-06 57.8 184 23.9
QL09p019191 Quercus lobata HOM05D000281 ORTHO05D000290 1.1e-06 57.8 185 22.7
Aqoxy7G00697 Aquilegia oxysepala HOM05D000281 ORTHO05D000290 1.4e-06 57.4 180 25.6
CiPaw.05G218500 Carya illinoinensis HOM05D000281 ORTHO05D000290 1.4e-06 57.4 196 26.0
Ciclev10005968m.g Citrus clementina HOM05D000281 ORTHO05D000290 1.4e-06 57.4 182 23.1
FAN03G2116 Fragaria x ananassa HOM05D000281 ORTHO05D000290 1.4e-06 57.4 187 25.1
PGSC0003DMG400012019 Solanum tuberosum HOM05D000281 ORTHO05D000290 1.4e-06 57.4 188 23.9
Aa31LG9G10220 Aethionema arabicum HOM05D000281 ORTHO05D000290 1.9e-06 57.0 180 25.0
QL09p019199 Quercus lobata HOM05D000281 ORTHO05D000290 1.9e-06 57.0 185 22.2
Solyc03g083720.1 Solanum lycopersicum HOM05D000281 ORTHO05D000290 1.9e-06 57.0 197 24.9
Carub.0008s2303 Capsella rubella HOM05D000281 ORTHO05D000290 2.4e-06 56.6 192 24.5
Lsat_1_v5_gn_2_128840 Lactuca sativa HOM05D000281 ORTHO05D000290 2.4e-06 56.6 173 25.4
Migut.F00458 Erythranthe guttata HOM05D000281 ORTHO05D000290 3.2e-06 56.2 180 22.8
Migut.F00460 Erythranthe guttata HOM05D000281 ORTHO05D000290 3.2e-06 56.2 165 21.2
MD00G1105000 Malus domestica HOM05D000281 ORTHO05D000290 3.2e-06 56.2 174 21.3
Atru.chr1.681 Acer truncatum HOM05D000281 ORTHO05D000290 4.1e-06 55.8 184 24.5
AL8G39180 Arabidopsis lyrata HOM05D000281 ORTHO05D000290 4.1e-06 55.8 195 25.6
BcaNung01401 Brassica carinata HOM05D000281 ORTHO05D000290 5.4e-06 55.5 181 24.3
Duzib084G1386 Durio zibethinus HOM05D000281 ORTHO05D000290 5.4e-06 55.5 157 24.8
Eucgr.K00155 Eucalyptus grandis HOM05D000281 ORTHO05D000290 5.4e-06 55.5 185 24.9
HanXRQChr04g0125811 Helianthus annuus HOM05D000281 ORTHO05D007047 5.4e-06 55.5 174 28.7
HanXRQChr06g0178231 Helianthus annuus HOM05D000281 ORTHO05D007047 5.4e-06 55.5 184 28.3
PGSC0003DMG400021574 Solanum tuberosum HOM05D000281 ORTHO05D000290 5.4e-06 55.5 161 22.4
Thecc.03G258900 Theobroma cacao HOM05D000281 ORTHO05D017155 5.4e-06 55.5 164 25.0
Thecc.03G259000 Theobroma cacao HOM05D000281 ORTHO05D000290 5.4e-06 55.5 158 25.3
ClCG10G003050 Citrullus lanatus HOM05D000281 ORTHO05D000290 7.1e-06 55.1 193 25.4
CsaV3_5G003890 Cucumis sativus L. HOM05D000281 ORTHO05D000290 7.1e-06 55.1 179 26.3
ECA233G0595 Erigeron canadensis HOM05D000281 ORTHO05D000290 7.1e-06 55.1 163 23.9
Gorai.003G168700 Gossypium raimondii HOM05D000281 ORTHO05D000290 7.1e-06 55.1 157 25.5
TWI60G0640 Tripterygium wilfordii HOM05D000281 ORTHO05D000290 7.1e-06 55.1 185 24.3
Migut.O00300 Erythranthe guttata HOM05D000281 ORTHO05D000290 9.2e-06 54.7 181 21.5
Gohir.D03G160200 Gossypium hirsutum HOM05D000281 ORTHO05D000290 9.2e-06 54.7 157 25.5
Potri.012G127500 Populus trichocarpa HOM05D000281 ORTHO05D000290 9.2e-06 54.7 189 23.8
Sopen03g023510 Solanum pennellii HOM05D000281 ORTHO05D000290 9.2e-06 54.7 187 24.1


User provided reference genes

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