Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 2127.4 1059 100.0
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 0.0e+00 1924.1 1059 91.3
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 0.0e+00 1442.2 1074 71.2
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 0.0e+00 1275.0 1174 60.6
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 0.0e+00 1167.9 1082 60.0
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 4.7e-277 958.4 1108 52.0
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 3.6e-229 799.3 1163 43.9
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.4e-225 787.3 1084 45.1
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 2.4e-225 786.6 1146 45.1
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.3e-223 780.8 1138 44.2
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 5.4e-217 758.8 1151 43.9
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.7e-216 756.5 1092 43.9
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 3.5e-216 756.1 1110 44.9
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 7.9e-216 755.0 1138 43.7
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 1.3e-215 754.2 1123 44.1
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 1.9e-214 750.4 1129 43.2
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 3.3e-214 749.6 1088 44.2
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.6e-214 748.8 1127 43.4
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 5.6e-214 748.8 1123 43.4
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.4e-214 748.4 1136 42.6
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 7.4e-214 748.4 1167 41.8
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 3.1e-212 743.0 1085 43.9
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 1.2e-211 741.1 1099 43.4
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 1.5e-211 740.7 1190 42.7
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 7.6e-211 738.4 1155 42.7
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 9.9e-211 738.0 1129 42.4
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 1.7e-210 737.3 1094 43.6
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 2.2e-210 736.9 1091 43.5
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.6e-208 730.7 1168 42.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.6e-208 730.7 1086 43.6
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 2.1e-208 730.3 1169 42.0
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.5e-208 729.6 1107 43.3
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 2.3e-207 726.9 1105 44.1
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 1.1e-206 724.5 1152 42.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 1.9e-206 723.8 1099 43.1
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 2.8e-205 719.9 1139 41.5
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 8.2e-205 718.4 1156 41.5
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 8.2e-205 718.4 1126 42.2
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 4.0e-204 716.1 1171 40.8
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 9.0e-204 714.9 1051 43.2
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 7.6e-203 711.8 1210 40.3
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 1.4e-201 707.6 1116 42.1
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.5e-201 706.8 1156 41.0
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 7.1e-201 705.3 1141 41.1
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 1.6e-200 704.1 1123 41.5
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 3.9e-199 699.5 1133 41.9
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 4.3e-198 696.0 1049 41.9
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.6e-197 694.1 881 47.7
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 1.6e-197 694.1 1083 41.4
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 2.8e-197 693.3 1080 40.9
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 8.2e-197 691.8 1077 41.7
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 4.1e-196 689.5 1110 42.1
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 9.0e-196 688.3 1092 41.8
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 9.0e-196 688.3 923 45.2
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 4.5e-195 686.0 1060 41.3
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.3e-194 684.5 1096 42.0
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 2.9e-194 683.3 1100 41.3
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 8.5e-194 681.8 993 44.6
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 1.9e-193 680.6 1078 42.0
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 4.2e-193 679.5 1074 42.5
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 4.2e-193 679.5 1071 41.1
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 9.4e-193 678.3 988 44.3
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 2.7e-192 676.8 1041 42.1
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 3.6e-192 676.4 1107 41.2
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.0e-191 674.9 1048 41.9
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.8e-191 674.1 557 60.3
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 5.7e-190 669.1 1109 41.7
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.7e-189 667.5 1122 40.5
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 1.2e-187 661.4 1062 40.4
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 3.4e-187 659.8 1074 41.1
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 3.4e-187 659.8 1066 41.3
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 5.9e-187 659.1 1061 41.6
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.7e-186 657.5 1096 41.1
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 6.5e-186 655.6 1050 41.8
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 1.1e-185 654.8 1042 41.2
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 1.1e-185 654.8 980 43.1
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 3.2e-185 653.3 1045 40.8
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 1.6e-184 651.0 1044 41.3
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 3.6e-184 649.8 1148 39.3
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 5.1e-183 646.0 1116 39.6
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 1.1e-182 644.8 892 43.9
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 1.5e-182 644.4 876 44.4
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 4.4e-182 642.9 880 44.1
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 5.7e-182 642.5 1068 40.6
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 1.3e-181 641.3 1056 41.0
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 2.8e-181 640.2 960 42.5
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 4.8e-181 639.4 1056 41.1
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 1.1e-180 638.3 1152 39.6
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 1.1e-180 638.3 1077 39.8
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.4e-180 637.9 560 58.8
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 5.3e-180 636.0 1057 40.3
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 9.1e-172 608.6 973 41.2
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 2.0e-171 607.4 1057 38.3
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 1.5e-169 601.3 1031 38.5
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 1.8e-167 594.3 881 41.1
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.2e-162 577.4 927 41.6
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 1.9e-161 574.3 1034 37.6
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.6e-158 563.9 570 51.9
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 6.8e-151 539.3 728 45.7
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.8e-146 523.5 1124 37.3
CsaV3_1G001450 Cucumis sativus L. HOM05D000922 ORTHO05D007418 1.2e-123 448.7 924 36.6
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 5.6e-121 439.9 1106 33.4
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.7e-117 428.3 366 59.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 8.4e-117 426.0 423 52.2
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 1.7e-114 418.3 783 35.5
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 3.3e-113 414.1 498 44.4
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 2.1e-112 411.4 523 44.9
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 2.0e-110 404.8 312 63.1
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 9.3e-108 396.0 608 41.1
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 6.2e-104 383.3 437 48.5
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.1e-103 382.5 868 35.9
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 6.0e-99 366.7 846 35.0
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 3.9e-98 364.0 513 41.5
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 9.7e-73 279.6 731 33.0
C01p31950 Brassica napus HOM05D000922 ORTHO05D007418 1.1e-68 266.2 694 32.6
ECA246G0682 Erigeron canadensis HOM05D000922 ORTHO05D007418 7.2e-68 263.5 667 34.0
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 1.4e-66 259.2 227 63.0
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 1.5e-60 239.2 221 55.2
CDE07G0520 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 2.5e-28 132.1 276 31.9
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 2.5e-20 105.5 447 30.9
PRCOL_00005721 Prasinoderma coloniale HOM05D000922 ORTHO05D007418 4.0e-18 98.2 145 38.6
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 2.9e-16 92.0 98 59.2
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 2.7e-14 85.5 91 50.5
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 3.5e-14 85.1 456 27.6
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 5.1e-13 81.3 59 54.2
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 2.5e-12 79.0 109 41.3
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 7.3e-12 77.4 51 60.8
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.1e-11 75.9 68 50.0
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.8e-11 75.5 175 38.9
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 4.7e-11 74.7 55 54.5
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 2.3e-10 72.4 55 54.5
FAN04G1664 Fragaria x ananassa HOM05D000922 ORTHO05D007418 6.8e-10 70.9 87 49.4
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 1.4e-07 63.2 142 33.1


User provided reference genes

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