Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030920 Chenopodium quinoa HOM05D020881 ORTHO05D008469 0.0e+00 1168.3 848 100.0
AUR62027081 Chenopodium quinoa HOM05D020881 ORTHO05D008469 2.8e-296 1021.9 848 91.4
EL10Ac9g22125 Beta vulgaris HOM05D020881 ORTHO05D008469 6.4e-144 515.8 868 53.6
Ah.01g007240 Amaranthus hybridus HOM05D020881 ORTHO05D008469 5.3e-90 336.7 903 39.8
Hund00400 Selenicereus undatus HOM05D020881 ORTHO05D008469 3.4e-76 290.8 543 40.1
Sc08g0004130 Simmondsia chinensis HOM05D020881 ORTHO05D008469 2.6e-36 158.3 527 32.3
Potri.012G081500 Populus trichocarpa HOM05D000855 ORTHO05D008469 1.5e-23 115.9 589 30.4
Gohir.A06G170100 Gossypium hirsutum HOM05D000855 ORTHO05D008469 1.6e-22 112.5 606 28.1
Sabra12G0058300 Salix brachista HOM05D000855 ORTHO05D008469 2.8e-22 111.7 586 28.3
GSVIVG01007736001 Vitis vinifera HOM05D000855 ORTHO05D008469 2.4e-21 108.6 691 29.1
Gohir.D06G177900 Gossypium hirsutum HOM05D000855 ORTHO05D008469 5.3e-21 107.5 602 28.2
Gorai.N007400 Gossypium raimondii HOM05D000855 ORTHO05D008469 1.2e-20 106.3 602 28.2
Thecc.10G121100 Theobroma cacao HOM05D000855 ORTHO05D008469 1.3e-19 102.8 613 28.9
Dinv20648 Davidia involucrata HOM05D000855 ORTHO05D008469 8.4e-19 100.1 242 36.4
Duzib106G2025 Durio zibethinus HOM05D000855 ORTHO05D008469 8.4e-19 100.1 647 27.5
Manes.06G105300 Manihot esculenta HOM05D000855 ORTHO05D008469 1.9e-18 99.0 588 27.4
Atru.chr9.2483 Acer truncatum HOM05D000855 ORTHO05D008469 2.4e-18 98.6 631 26.9
COL.COLO4_21664 Corchorus olitorius HOM05D000855 ORTHO05D008469 1.3e-16 92.8 607 26.7
Actinidia19324 Actinidia chinensis HOM05D000855 ORTHO05D008469 3.9e-16 91.3 646 25.7
MD06G1173400 Malus domestica HOM05D000855 ORTHO05D008469 1.5e-15 89.4 568 27.3
Manes.14G065400 Manihot esculenta HOM05D000855 ORTHO05D008469 1.5e-15 89.4 591 28.6
Prupe.5G172900 Prunus persica HOM05D000855 ORTHO05D008469 1.5e-15 89.4 613 27.9
MD14G1179900 Malus domestica HOM05D000855 ORTHO05D008469 5.6e-15 87.4 586 28.0
RcHm_v2.0_Chr7g0223481 Rosa chinensis HOM05D000855 ORTHO05D008469 7.4e-15 87.0 591 27.1
Rhsim08G0172900 Rhododendron simsii HOM05D000855 ORTHO05D008469 1.6e-14 85.9 628 25.6
Ciclev10018990m.g Citrus clementina HOM05D000855 ORTHO05D008469 2.1e-14 85.5 659 25.8
RcHm_v2.0_Chr7g0223491 Rosa chinensis HOM05D000855 ORTHO05D008469 4.8e-14 84.3 588 26.9
FAN25G0827 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.4e-13 82.8 603 26.0
vmacro19393 Vaccinium macrocarpon HOM05D000855 ORTHO05D008469 4.0e-13 81.3 140 40.0
Cpa.g.c30444 Carica papaya HOM05D000855 ORTHO05D008469 5.3e-13 80.9 606 26.6
TWI23G1303 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 6.9e-13 80.5 633 25.8
Actinidia33071 Actinidia chinensis HOM05D000855 ORTHO05D008469 1.2e-12 79.7 184 34.8
Nitab4.5_0000003g0610 Nicotiana tabacum HOM05D000855 ORTHO05D008469 4.5e-12 77.8 543 26.7
FAN21G0403 Fragaria x ananassa HOM05D000855 ORTHO05D008469 7.6e-12 77.0 597 25.3
FAN11G2252 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.3e-11 76.3 589 25.0
Hma1.2p1_0176F.1_g077363 Hydrangea macrophylla HOM05D000855 ORTHO05D008469 1.7e-11 75.9 154 37.7
QL10p011511 Quercus lobata HOM05D000855 ORTHO05D008469 1.7e-11 75.9 200 34.5
Sabra15G0102000 Salix brachista HOM05D002152 ORTHO05D002737 1.7e-11 75.9 66 65.2
PGSC0003DMG400026995 Solanum tuberosum HOM05D000855 ORTHO05D008469 2.9e-11 75.1 609 24.8
Peaxi162Scf00689g10024 Petunia axillaris HOM05D000855 ORTHO05D008469 4.9e-11 74.3 579 25.6
Cfa019138 Carpinus fangiana HOM05D000855 ORTHO05D008469 6.5e-11 73.9 196 34.7
DCAR_031321 Daucus carota HOM05D000855 ORTHO05D008469 1.4e-10 72.8 127 43.3
Haze_07505 Corylus avellana HOM05D000855 ORTHO05D008469 1.9e-10 72.4 194 34.5
FAN16G3561 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.5e-10 72.0 594 24.9
CSS0004279 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 4.2e-10 71.2 683 24.5
ClCG01G013160 Citrullus lanatus HOM05D000855 ORTHO05D008469 4.2e-10 71.2 60 61.7
CAN.G628.82 Capsicum annuum HOM05D000855 ORTHO05D008469 5.5e-10 70.9 598 26.8
TAR374G0945 Trochodendron aralioides HOM05D000855 ORTHO05D008469 5.5e-10 70.9 87 49.4
MELO3C002265.2 Cucumis melo HOM05D000855 ORTHO05D008469 9.3e-10 70.1 61 59.0
Nitab4.5_0004210g0020 Nicotiana tabacum HOM05D000855 ORTHO05D008469 1.6e-09 69.3 536 26.1
TAR629G1958 Trochodendron aralioides HOM05D000855 ORTHO05D001716 1.6e-09 69.3 531 24.1
Manes.15G166000 Manihot esculenta HOM05D000855 ORTHO05D001716 2.1e-09 68.9 189 31.7
FAN08G1626 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.7e-09 68.6 422 26.5
CiPaw.12G026700 Carya illinoinensis HOM05D000855 ORTHO05D008469 4.6e-09 67.8 200 33.0
FvH4_3g28680 Fragaria vesca HOM05D000855 ORTHO05D008469 6.0e-09 67.4 581 25.6
CSS0039177 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 3.0e-08 65.1 672 24.6
Carub.0005s1430 Capsella rubella HOM05D000855 ORTHO05D008469 8.7e-08 63.5 52 65.4
THA.LOC104821475 Tarenaya hassleriana HOM05D000855 ORTHO05D008469 8.7e-08 63.5 62 56.5
FAN04G0669 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.9e-07 62.4 414 25.8
Sed0024227 Sechium edule HOM05D000855 ORTHO05D008469 4.3e-07 61.2 659 24.0
Oeu016391.2 Olea europaea HOM05D000855 ORTHO05D008469 5.7e-07 60.8 84 44.0
TAR371G0869 Trochodendron aralioides HOM05D000855 ORTHO05D001716 5.7e-07 60.8 86 46.5
ECA246G2551 Erigeron canadensis HOM05D000855 ORTHO05D008469 7.4e-07 60.5 78 47.4
AT3G48187 Arabidopsis thaliana HOM05D000855 ORTHO05D008469 9.7e-07 60.1 77 50.6
Lj9C448T5 Lonicera japonica HOM05D000855 ORTHO05D008469 9.7e-07 60.1 53 56.6
Nn4g22754 Nelumbo nucifera HOM05D000855 ORTHO05D001716 9.7e-07 60.1 73 47.9
TWI14G0012 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 9.7e-07 60.1 646 24.0
FvH4_5g29880 Fragaria vesca HOM05D000855 ORTHO05D008469 1.3e-06 59.7 425 24.5
FAN18G4278 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.3e-06 59.7 425 24.5
Lj5C125T4 Lonicera japonica HOM05D000855 ORTHO05D008469 1.3e-06 59.7 570 23.9
Aqoxy3G02940 Aquilegia oxysepala HOM05D000855 ORTHO05D008469 1.6e-06 59.3 112 41.1
CARHR156910 Cardamine hirsuta HOM05D000855 ORTHO05D008469 2.8e-06 58.5 52 61.5
FAN13G1685 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.8e-06 58.5 421 25.4
Solyc06g071490.3 Solanum lycopersicum HOM05D000855 ORTHO05D008469 2.8e-06 58.5 609 23.8
Sed0010009 Sechium edule HOM05D000855 ORTHO05D008469 4.8e-06 57.8 641 23.7
Ca_16318_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008469 6.3e-06 57.4 73 47.9
BcaC07g39301 Brassica carinata HOM05D000855 ORTHO05D008469 8.2e-06 57.0 57 50.9
HanXRQChr05g0156261 Helianthus annuus HOM05D000855 ORTHO05D008469 8.2e-06 57.0 70 50.0


User provided reference genes

Program Settings