Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 2.2e-157 558.9 279 100.0
AUR62030496 Chenopodium quinoa HOM05D029928 ORTHO05D003520 3.9e-98 362.1 200 90.0
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 2.4e-39 166.8 283 44.5
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 8.9e-18 95.1 162 37.0
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.7e-16 90.9 126 42.1
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.9e-16 90.1 126 42.1
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.9e-15 87.4 226 34.1
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 1.2e-14 84.7 261 31.4
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.6e-14 84.3 226 33.6
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.1e-14 84.0 159 40.3
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 2.7e-14 83.6 240 32.5
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 2.7e-14 83.6 130 41.5
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 3.5e-14 83.2 197 37.1
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.5e-14 83.2 197 37.1
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.6e-14 82.8 191 34.0
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.0e-13 81.6 197 38.6
Gohir.D04G131050 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.0e-13 81.6 277 33.2
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 1.0e-13 81.6 170 39.4
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-13 80.9 256 31.6
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 1.7e-13 80.9 241 32.0
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 3.0e-13 80.1 242 32.2
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 3.9e-13 79.7 238 31.1
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 3.9e-13 79.7 283 33.2
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 3.9e-13 79.7 188 37.2
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 3.9e-13 79.7 142 35.9
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.9e-13 79.7 204 34.3
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 5.1e-13 79.3 238 34.9
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 6.6e-13 79.0 261 29.9
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 6.6e-13 79.0 261 29.9
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.1e-12 78.2 277 33.2
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 1.1e-12 78.2 230 33.9
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.5e-12 77.8 200 31.5
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 1.9e-12 77.4 191 36.6
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 3.3e-12 76.6 275 31.3
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 3.3e-12 76.6 200 33.0
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 4.3e-12 76.3 130 37.7
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 5.6e-12 75.9 243 31.7
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 7.3e-12 75.5 181 33.7
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 7.3e-12 75.5 289 31.8
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 1.2e-11 74.7 210 33.8
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 1.2e-11 74.7 288 32.3
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.2e-11 74.7 264 27.3
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.6e-11 74.3 183 32.8
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 1.6e-11 74.3 265 30.2
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-11 73.9 166 35.5
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 2.1e-11 73.9 166 35.5
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.1e-11 73.9 288 30.6
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 2.1e-11 73.9 218 33.0
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 2.8e-11 73.6 281 27.4
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 3.6e-11 73.2 242 31.8
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.6e-11 73.2 247 33.6
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 4.7e-11 72.8 275 30.2
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 6.2e-11 72.4 235 30.6
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 1.1e-10 71.6 173 36.4
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.4e-10 71.2 255 30.2
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 1.8e-10 70.9 278 27.7
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 2.4e-10 70.5 129 36.4
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 2.4e-10 70.5 210 30.5
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 4.0e-10 69.7 288 30.6
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 4.0e-10 69.7 289 32.9
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 4.0e-10 69.7 178 34.8
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 5.2e-10 69.3 276 31.2
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 5.2e-10 69.3 104 38.5
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 5.2e-10 69.3 291 29.6
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 6.8e-10 68.9 123 36.6
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 6.8e-10 68.9 289 29.4
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.2e-09 68.2 253 28.9
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.2e-09 68.2 247 31.6
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 1.2e-09 68.2 162 37.0
Lalb_Chr12g0207011 Lupinus albus HOM05D003726 ORTHO05D003520 2.0e-09 67.4 121 38.8
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 2.0e-09 67.4 135 35.6
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.0e-09 67.4 269 30.1
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 2.6e-09 67.0 193 33.2
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 2.6e-09 67.0 241 28.6
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 3.4e-09 66.6 272 29.8
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 3.4e-09 66.6 202 30.2
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 3.4e-09 66.6 193 29.0
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 3.4e-09 66.6 179 31.3
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 4.4e-09 66.2 193 31.1
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 4.4e-09 66.2 127 31.5
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 4.4e-09 66.2 209 33.0
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 5.8e-09 65.9 239 29.3
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 5.8e-09 65.9 183 29.0
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 7.6e-09 65.5 275 31.6
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 7.6e-09 65.5 258 27.9
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 7.6e-09 65.5 272 27.9
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 9.9e-09 65.1 273 27.8
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 9.9e-09 65.1 214 28.5
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 9.9e-09 65.1 128 32.8
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 2.2e-08 63.9 278 27.3
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 2.9e-08 63.5 281 28.8
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.8e-08 63.2 115 34.8
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 6.4e-08 62.4 297 27.6
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 6.4e-08 62.4 132 35.6
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 8.4e-08 62.0 121 31.4
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.1e-07 61.6 259 26.6
Psat7g245680 Pisum sativum HOM05D003726 ORTHO05D003520 1.1e-07 61.6 274 26.6
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.4e-07 61.2 200 29.5
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 1.4e-07 61.2 260 28.1
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.9e-07 60.8 189 31.7
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 2.4e-07 60.5 277 30.0
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 4.1e-07 59.7 299 27.8
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 4.1e-07 59.7 262 27.1
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.1e-07 59.7 122 38.5
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 5.4e-07 59.3 287 27.2
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 7.1e-07 58.9 290 27.9
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 7.1e-07 58.9 179 28.5
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 1.2e-06 58.2 134 34.3
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 1.6e-06 57.8 157 27.4
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 2.1e-06 57.4 306 27.1
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 2.1e-06 57.4 192 27.1
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.1e-06 57.4 251 28.7
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 2.7e-06 57.0 278 28.1
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 7.8e-06 55.5 259 26.3


User provided reference genes

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