Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.7e-91 338.6 161 100.0
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.9e-91 337.4 161 99.4
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.6e-83 312.8 161 90.7
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 7.5e-78 293.9 161 82.6
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.2e-75 286.6 158 81.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.6e-75 286.2 161 80.7
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-75 285.8 158 80.4
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 4.6e-75 284.6 158 79.1
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 7.8e-75 283.9 161 78.9
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.0e-74 283.5 158 81.0
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.0e-74 283.5 135 98.5
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.7e-74 282.7 161 78.9
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 3.0e-74 282.0 159 80.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 80.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 158 77.8
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.9e-74 281.6 161 77.0
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 5.1e-74 281.2 161 77.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.9e-73 279.3 154 79.2
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.5e-73 278.9 162 80.2
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 7.3e-73 277.3 157 79.6
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 4.7e-72 274.6 157 79.0
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.7e-72 274.6 214 63.6
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 76.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 77.6
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 6.2e-72 274.2 161 75.8
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.1e-72 273.9 159 76.1
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 76.4
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 1.1e-71 273.5 161 75.2
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.8e-71 272.7 159 77.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 1.8e-71 272.7 159 77.4
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.8e-71 272.7 155 79.4
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 2.4e-71 272.3 158 76.6
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.4e-71 272.3 159 77.4
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.1e-71 271.9 161 76.4
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 75.2
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.2e-71 271.2 161 75.2
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 6.8e-71 270.8 158 75.9
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 6.8e-71 270.8 159 76.7
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 6.8e-71 270.8 161 75.8
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.2e-70 270.0 157 76.4
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.2e-70 270.0 161 75.2
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.5e-70 269.6 152 78.3
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.5e-70 269.6 155 79.4
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 2.6e-70 268.9 156 77.6
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 3.4e-70 268.5 161 74.5
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.4e-70 268.5 159 74.8
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 5.8e-70 267.7 158 75.9
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.8e-70 267.7 158 75.9
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 5.8e-70 267.7 158 75.9
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.7e-69 266.2 161 73.9
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.9e-69 265.4 151 78.8
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 74.5
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 6.4e-69 264.2 161 71.4
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 6.4e-69 264.2 152 77.6
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 8.4e-69 263.8 161 72.7
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 8.4e-69 263.8 153 76.5
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 8.4e-69 263.8 161 72.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 72.7
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.4e-68 263.1 161 72.7
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 1.4e-68 263.1 154 73.4
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.9e-68 262.7 154 74.7
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.9e-68 262.7 161 71.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.9e-68 262.7 162 73.5
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 2.4e-68 262.3 161 68.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.4e-68 262.3 160 71.2
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 4.1e-68 261.5 161 69.6
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 4.1e-68 261.5 161 68.9
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 4.1e-68 261.5 161 68.9
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 5.4e-68 261.2 161 68.9
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 7.1e-68 260.8 161 68.9
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 9.2e-68 260.4 161 68.3
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.6e-67 259.6 154 72.7
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.6e-67 259.6 154 74.0
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.1e-67 259.2 161 68.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 3.5e-67 258.5 161 67.7
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.6e-67 258.1 161 67.7
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 4.6e-67 258.1 161 68.3
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 4.6e-67 258.1 159 71.7
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 6.0e-67 257.7 152 73.0
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 7.8e-67 257.3 154 72.1
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 7.8e-67 257.3 160 71.9
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 1.3e-66 256.5 157 73.9
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.3e-66 256.5 157 72.0
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.1e-66 254.6 159 70.4
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 6.6e-66 254.2 161 70.2
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-65 253.4 169 66.3
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.5e-65 253.1 166 66.9
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.5e-65 253.1 152 72.4
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.5e-65 252.3 162 71.0
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 4.3e-65 251.5 150 77.3
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 4.3e-65 251.5 152 71.7
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.4e-63 246.5 149 75.8
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.4e-63 246.5 148 72.3
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.4e-63 245.7 161 71.4
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.1e-63 245.4 162 67.3
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.0e-62 242.7 138 77.5
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 4.4e-62 241.5 162 65.4
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 3.2e-60 235.3 163 66.9
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 5.4e-60 234.6 137 73.7
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 9.3e-60 233.8 158 67.7
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.1e-59 232.6 137 75.2
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 6.0e-59 231.1 117 88.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 8.7e-58 227.3 137 75.9
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 6.2e-56 221.1 152 67.1
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.4e-55 219.2 139 70.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.1e-52 207.6 116 77.6
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 9.3e-52 207.2 183 56.8
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.0e-51 204.5 118 76.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.0e-50 203.8 114 77.2
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-50 202.6 134 64.9
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 3.9e-50 201.8 144 61.1
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.5e-49 199.9 115 76.5
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.9e-49 199.5 134 64.2
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.4e-46 188.7 102 80.4
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.6e-46 187.6 155 60.0
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 1.3e-45 186.8 96 82.3
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 2.4e-44 182.6 114 67.5
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 4.2e-44 181.8 95 83.2
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.6e-43 179.9 132 62.9
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.3e-41 171.8 102 69.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 3.2e-36 155.6 171 48.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 3.9e-34 148.7 86 76.7
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.9e-33 146.4 157 49.0
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 2.5e-33 146.0 85 76.5
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.3e-33 145.2 139 54.0
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.2e-27 127.1 67 83.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.9e-20 103.2 54 83.3
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 3.2e-12 75.9 60 55.0


User provided reference genes

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