Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.2e-125 453.4 254 100.0
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.8e-49 200.3 114 92.1
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 1.3e-44 184.1 113 82.3
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 5.6e-43 178.7 119 79.0
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 1.7e-39 167.2 133 68.4
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 8.3e-39 164.9 113 72.6
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 8.3e-39 164.9 116 71.6
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 8.3e-39 164.9 113 73.5
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 1.1e-38 164.5 116 71.6
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.4e-38 164.1 136 67.6
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 2.4e-38 163.3 116 70.7
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 4.1e-38 162.5 112 71.4
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 5.4e-38 162.2 113 71.7
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 5.4e-38 162.2 113 71.7
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 5.4e-38 162.2 114 71.1
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 7.1e-38 161.8 112 71.4
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 7.1e-38 161.8 109 74.3
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 7.1e-38 161.8 113 70.8
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 1.2e-37 161.0 113 69.9
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.2e-37 161.0 113 69.9
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.2e-37 161.0 113 69.9
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 1.2e-37 161.0 113 69.0
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 1.6e-37 160.6 113 69.9
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 2.1e-37 160.2 118 67.8
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 2.7e-37 159.8 113 70.8
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 3.5e-37 159.5 113 68.1
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 1.0e-36 157.9 113 69.0
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 1.3e-36 157.5 115 65.2
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 1.7e-36 157.1 116 69.8
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.7e-36 157.1 115 67.8
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 2.3e-36 156.8 115 66.1
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 3.0e-36 156.4 115 67.8
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 3.9e-36 156.0 118 66.1
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 5.1e-36 155.6 113 68.1
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 5.1e-36 155.6 113 68.1
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 5.1e-36 155.6 114 65.8
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 6.6e-36 155.2 114 67.5
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 6.6e-36 155.2 113 66.4
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 6.6e-36 155.2 122 65.6
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 6.6e-36 155.2 114 68.4
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 6.6e-36 155.2 113 68.1
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 1.1e-35 154.5 115 67.0
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 1.5e-35 154.1 114 66.7
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 1.5e-35 154.1 116 66.4
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 1.5e-35 154.1 114 67.5
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 1.5e-35 154.1 112 68.8
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 1.9e-35 153.7 113 68.1
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 2.5e-35 153.3 116 68.1
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 2.5e-35 153.3 111 67.6
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 2.5e-35 153.3 100 77.0
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 3.3e-35 152.9 114 64.9
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 3.3e-35 152.9 115 67.0
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 4.3e-35 152.5 116 65.5
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 7.3e-35 151.8 114 64.9
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 7.3e-35 151.8 114 64.0
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 9.5e-35 151.4 113 65.5
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 9.5e-35 151.4 115 62.6
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 9.5e-35 151.4 114 66.7
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 1.2e-34 151.0 114 66.7
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 1.2e-34 151.0 113 66.4
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 1.2e-34 151.0 115 65.2
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 1.6e-34 150.6 114 68.4
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 1.6e-34 150.6 116 62.1
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 2.8e-34 149.8 113 67.3
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 2.8e-34 149.8 114 64.9
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 2.8e-34 149.8 113 67.3
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 3.6e-34 149.4 114 65.8
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 4.7e-34 149.1 113 65.5
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 4.7e-34 149.1 113 65.5
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 4.7e-34 149.1 113 66.4
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 4.7e-34 149.1 122 59.8
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 4.7e-34 149.1 122 59.8
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 6.2e-34 148.7 120 63.3
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 1.1e-33 147.9 120 64.2
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 1.1e-33 147.9 113 62.8
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 1.1e-33 147.9 115 64.3
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 1.4e-33 147.5 111 65.8
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 2.3e-33 146.7 114 64.9
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 8.9e-33 144.8 108 65.7
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 3.4e-32 142.9 91 76.9
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 7.6e-32 141.7 122 59.8
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 9.9e-32 141.4 113 60.2
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 1.3e-31 141.0 126 58.7
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 2.2e-31 140.2 113 59.3
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 2.2e-31 140.2 113 58.4
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 3.8e-31 139.4 113 57.5
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 4.9e-31 139.0 113 57.5
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 8.4e-31 138.3 113 57.5
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 1.4e-30 137.5 125 60.0
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 3.2e-30 136.3 113 56.6
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 4.1e-30 136.0 113 59.3
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 5.4e-30 135.6 113 57.5
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 1.2e-29 134.4 113 56.6
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 1.2e-29 134.4 114 59.6
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 1.2e-29 134.4 115 62.6
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 2.1e-29 133.7 113 56.6
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 2.1e-29 133.7 113 57.5
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 3.5e-29 132.9 113 56.6
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 6.0e-29 132.1 84 77.4
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 1.7e-28 130.6 138 52.2
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 9.6e-27 124.8 88 68.2
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 6.2e-26 122.1 82 70.7
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.8e-25 120.6 85 69.4
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 2.9e-23 113.2 85 61.2
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 1.0e-20 104.8 142 45.1
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 3.9e-20 102.8 112 50.9
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 2.5e-19 100.1 113 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 4.3e-19 99.4 105 49.5
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 1.4e-17 94.4 81 59.3
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 3.1e-17 93.2 63 71.4
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 4.0e-17 92.8 122 44.3
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 4.0e-17 92.8 186 39.2
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 9.0e-17 91.7 64 71.9
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 1.7e-15 87.4 86 53.5
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 3.5e-13 79.7 108 45.4
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 3.5e-13 79.7 108 45.4
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 1.5e-11 74.3 128 39.8
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 2.5e-11 73.6 83 43.4
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.1e-09 68.2 96 43.8
AUR62039322 Chenopodium quinoa HOM05D000561 ORTHO05D000514 1.4e-09 67.8 41 82.9
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 1.9e-06 57.4 106 34.0
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 5.5e-06 55.8 62 50.0


User provided reference genes

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