Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030689 Chenopodium quinoa HOM05D065301 ORTHO05D000601 9.9e-206 720.3 490 100.0
AUR62036333 Chenopodium quinoa HOM05D065301 ORTHO05D000601 1.7e-168 596.7 490 87.8
EL10Ac5g11820 Beta vulgaris HOM05D000778 ORTHO05D000601 5.3e-82 309.3 493 47.7
Ah.02g116100 Amaranthus hybridus HOM05D000778 ORTHO05D000601 8.2e-75 285.4 494 46.2
Hund14988 Selenicereus undatus HOM05D000778 ORTHO05D000601 3.5e-70 270.0 503 44.3
Hund10830 Selenicereus undatus HOM05D000778 ORTHO05D000601 4.0e-45 186.8 506 36.4
Sc22g0003130 Simmondsia chinensis HOM05D000778 ORTHO05D000601 3.4e-36 157.1 501 34.5
Dinv11888 Davidia involucrata HOM05D000778 ORTHO05D000601 8.0e-30 136.0 468 32.5
Ciclev10012108m.g Citrus clementina HOM05D000778 ORTHO05D000601 4.7e-22 110.2 512 28.3
CSS0044259 Camellia sinensis var. sinensis HOM05D000778 ORTHO05D000601 1.0e-21 109.0 502 30.5
MBI05_g28095_MAGBIO Magnolia biondii HOM05D000778 ORTHO05D000601 3.0e-21 107.5 202 41.1
CANSAT64G0079 Cannabis sativa HOM05D000778 ORTHO05D000601 6.4e-19 99.8 288 34.4
Cpa.g.sc222.23 Carica papaya HOM05D000778 ORTHO05D000601 8.3e-19 99.4 509 28.3
QL07p026771 Quercus lobata HOM05D000778 ORTHO05D000601 1.6e-17 95.1 519 28.9
TAR623G1775 Trochodendron aralioides HOM05D000778 ORTHO05D000601 2.7e-17 94.4 495 28.7
Prupe.7G090700 Prunus persica HOM05D000778 ORTHO05D000601 3.0e-16 90.9 496 36.7
Manes.09G042700 Manihot esculenta HOM05D000778 ORTHO05D000601 5.0e-16 90.1 464 28.7
MD12G1044500 Malus domestica HOM05D000778 ORTHO05D000601 6.6e-16 89.7 290 34.5
TPR.G34436 Trifolium pratense HOM05D000778 ORTHO05D000601 8.6e-16 89.4 296 35.1
Duzib128G1870 Durio zibethinus HOM05D000778 ORTHO05D000601 1.5e-15 88.6 503 28.0
TWI53G1056 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 1.5e-15 88.6 454 28.0
Hma1.2p1_0969F.1_g242590 Hydrangea macrophylla HOM05D000778 ORTHO05D000601 1.2e-14 85.5 511 28.0
RcHm_v2.0_Chr3g0477191 Rosa chinensis HOM05D000778 ORTHO05D000601 2.1e-14 84.7 493 30.4
PGSC0003DMG400021339 Solanum tuberosum HOM05D000778 ORTHO05D000601 2.1e-14 84.7 297 32.0
Haze_20112 Corylus avellana HOM05D000778 ORTHO05D000601 6.2e-14 83.2 504 28.8
TWI74G0228 Tripterygium wilfordii HOM05D000778 ORTHO05D000601 6.2e-14 83.2 509 28.1
vmacro07492 Vaccinium macrocarpon HOM05D000778 ORTHO05D000601 3.1e-13 80.9 297 30.0
ClCG10G018060 Citrullus lanatus HOM05D000778 ORTHO05D000601 5.2e-13 80.1 505 31.7
Nitab4.5_0000220g0130 Nicotiana tabacum HOM05D000778 ORTHO05D000601 6.8e-13 79.7 186 36.0
Solyc01g006830.3 Solanum lycopersicum HOM05D000778 ORTHO05D000601 8.9e-13 79.3 291 32.6
Nitab4.5_0010873g0010 Nicotiana tabacum HOM05D000778 ORTHO05D000601 1.5e-12 78.6 292 32.9
Solyc10g081730.2 Solanum lycopersicum HOM05D000778 ORTHO05D000601 1.5e-12 78.6 291 30.6
Sopen10g032240 Solanum pennellii HOM05D000778 ORTHO05D000601 1.5e-12 78.6 291 30.6
Thecc.05G108900 Theobroma cacao HOM05D000778 ORTHO05D000601 1.5e-12 78.6 508 26.2
Duzib106G2033 Durio zibethinus HOM05D000778 ORTHO05D000601 4.4e-12 77.0 291 32.0
Medtr1g055085 Medicago truncatula HOM05D000778 ORTHO05D000601 5.8e-12 76.6 287 33.1
Nitab4.5_0000721g0190 Nicotiana tabacum HOM05D000778 ORTHO05D000601 7.5e-12 76.3 301 31.6
Rhsim03G0062900 Rhododendron simsii HOM05D000778 ORTHO05D000601 7.5e-12 76.3 299 32.1
MD14G1043400 Malus domestica HOM05D000778 ORTHO05D000601 9.8e-12 75.9 494 30.4
PSO384G4839 Papaver somniferum HOM05D000778 ORTHO05D000601 9.8e-12 75.9 280 33.6
Cfa020080 Carpinus fangiana HOM05D000778 ORTHO05D000601 2.2e-11 74.7 534 27.0
PSO339G2773 Papaver somniferum HOM05D000778 ORTHO05D000601 2.9e-11 74.3 289 32.9
Gohir.A01G199900 Gossypium hirsutum HOM05D000778 ORTHO05D000601 4.9e-11 73.6 503 27.4
Lj5g0005651 Lotus japonicus HOM05D000778 ORTHO05D000601 4.9e-11 73.6 452 30.3
Aqoxy1G00588 Aquilegia oxysepala HOM05D000778 ORTHO05D000601 8.3e-11 72.8 482 26.6
Glyma.19G201500 Glycine max HOM05D000778 ORTHO05D000601 8.3e-11 72.8 303 34.0
Nitab4.5_0001918g0080 Nicotiana tabacum HOM05D000778 ORTHO05D000601 8.3e-11 72.8 255 32.9
TAR369G0228 Trochodendron aralioides HOM05D000778 ORTHO05D000601 8.3e-11 72.8 196 34.7
CAN.G911.9 Capsicum annuum HOM05D000778 ORTHO05D000601 3.2e-10 70.9 292 30.1
Peaxi162Scf00203g00812 Petunia axillaris HOM05D000778 ORTHO05D000601 4.1e-10 70.5 242 32.6
FAN14G3360 Fragaria x ananassa HOM05D000778 ORTHO05D000601 5.4e-10 70.1 502 27.5
Medtr7g106750 Medicago truncatula HOM05D000778 ORTHO05D000601 5.4e-10 70.1 294 31.3
Manes.08G036400 Manihot esculenta HOM05D000778 ORTHO05D000601 7.0e-10 69.7 487 27.3
Nn6g34603 Nelumbo nucifera HOM05D000778 ORTHO05D000601 7.0e-10 69.7 465 28.0
Oeu058124.1 Olea europaea HOM05D000778 ORTHO05D000601 7.0e-10 69.7 503 29.8
FAN09G3334 Fragaria x ananassa HOM05D000778 ORTHO05D000601 9.2e-10 69.3 502 27.9
FvH4_6g20850 Fragaria vesca HOM05D000778 ORTHO05D000601 1.2e-09 68.9 505 27.1
DCAR_016912 Daucus carota HOM05D000778 ORTHO05D000601 2.0e-09 68.2 444 27.9
Gorai.002G233700 Gossypium raimondii HOM05D000778 ORTHO05D000601 2.0e-09 68.2 295 34.2
Nn2g14388 Nelumbo nucifera HOM05D000778 ORTHO05D000601 2.0e-09 68.2 306 29.4
DCAR_020683 Daucus carota HOM05D000778 ORTHO05D000601 2.7e-09 67.8 262 29.0
MSTRG.5916 Avicennia marina HOM05D000778 ORTHO05D000601 3.5e-09 67.4 304 28.9
FAN05G1121 Fragaria x ananassa HOM05D000778 ORTHO05D000601 3.5e-09 67.4 505 26.9
FAN05G2927 Fragaria x ananassa HOM05D000778 ORTHO05D000601 3.5e-09 67.4 502 27.9
Duzib093G1343 Durio zibethinus HOM05D000778 ORTHO05D000601 7.8e-09 66.2 491 26.1
DCAR_013455 Daucus carota HOM05D000778 ORTHO05D000601 1.7e-08 65.1 255 31.8
Sopen01g002820 Solanum pennellii HOM05D000778 ORTHO05D000601 1.7e-08 65.1 460 30.2
PGSC0003DMG400028228 Solanum tuberosum HOM05D000778 ORTHO05D000601 1.7e-08 65.1 458 27.9
ATR0697G012 Amborella trichopoda HOM05D000778 ORTHO05D000601 2.3e-08 64.7 294 29.9
Lalb_Chr25g0287891 Lupinus albus HOM05D000778 ORTHO05D000601 2.3e-08 64.7 517 27.9
FAN02G0507 Fragaria x ananassa HOM05D000778 ORTHO05D000601 5.0e-08 63.5 448 27.5
arahy.Tifrunner.gnm1.ann1.MF78WR Arachis hypogaea HOM05D000778 ORTHO05D000601 6.6e-08 63.2 293 32.4
Lj1g0026823 Lotus japonicus HOM05D000778 ORTHO05D000601 6.6e-08 63.2 293 28.7
Oeu044681.1 Olea europaea HOM05D000778 ORTHO05D000601 6.6e-08 63.2 498 25.1
Glyma.03G204200 Glycine max HOM05D000778 ORTHO05D000601 8.6e-08 62.8 300 31.7
arahy.Tifrunner.gnm1.ann1.HKB63Q Arachis hypogaea HOM05D000778 ORTHO05D000601 1.1e-07 62.4 293 31.4
SalBow1G6066 Salvia bowleyana HOM05D000778 ORTHO05D000601 1.1e-07 62.4 290 27.9
CiPaw.09G023300 Carya illinoinensis HOM05D000778 ORTHO05D000601 1.9e-07 61.6 304 31.9
Glyma.10G084200 Glycine max HOM05D000778 ORTHO05D000601 1.9e-07 61.6 475 29.5
COL.COLO4_29512 Corchorus olitorius HOM05D000778 ORTHO05D000601 2.5e-07 61.2 506 27.7
Ca_11666_v3 Cicer arietinum L. HOM05D000778 ORTHO05D000601 4.3e-07 60.5 241 33.2
MELO3C009566.2 Cucumis melo HOM05D000778 ORTHO05D000601 4.3e-07 60.5 454 32.6
Sed0026206 Sechium edule HOM05D000778 ORTHO05D000601 5.6e-07 60.1 501 26.3
Actinidia37771 Actinidia chinensis HOM05D000778 ORTHO05D000601 7.3e-07 59.7 297 29.3
Sabra06G0154300 Salix brachista HOM05D000778 ORTHO05D000601 9.5e-07 59.3 275 29.8
Glyma.02G192600 Glycine max HOM05D000778 ORTHO05D000601 1.6e-06 58.5 468 28.6
SGA_v2.0_scaffold41G15773 Striga asiatica HOM05D000778 ORTHO05D000601 1.6e-06 58.5 274 30.3
Atru.chr8.1297 Acer truncatum HOM05D000778 ORTHO05D000601 2.1e-06 58.2 466 26.0
Potri.016G066600 Populus trichocarpa HOM05D000778 ORTHO05D000601 2.1e-06 58.2 475 24.4
Phvul.001G197800 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 4.7e-06 57.0 295 30.5
Sed0001287 Sechium edule HOM05D000778 ORTHO05D000601 4.7e-06 57.0 532 24.1
BcaB02g09392 Brassica carinata HOM05D000778 ORTHO05D000601 6.2e-06 56.6 275 29.1
Phvul.007G266000 Phaseolus vulgaris HOM05D000778 ORTHO05D000601 6.2e-06 56.6 483 28.0
TPR.G21246 Trifolium pratense HOM05D000778 ORTHO05D000601 6.2e-06 56.6 244 32.8


User provided reference genes

Program Settings