Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 7.7e-144 513.8 269 100.0
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 7.6e-115 417.5 232 94.0
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 4.8e-85 318.5 232 73.3
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 4.3e-78 295.4 232 71.1
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 4.1e-76 288.9 231 68.0
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 5.0e-58 228.8 232 56.5
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 9.1e-36 154.8 258 39.9
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.0e-34 151.4 236 45.8
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 1.7e-34 150.6 232 44.0
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 2.9e-34 149.8 232 45.7
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 5.0e-34 149.1 236 45.3
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 4.2e-33 146.0 112 67.0
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 9.5e-33 144.8 232 44.0
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 9.5e-33 144.8 239 41.4
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 1.2e-32 144.4 232 44.0
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 4.0e-31 139.4 234 42.7
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 5.2e-31 139.0 174 50.6
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.2e-30 137.9 292 36.6
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.2e-30 137.9 108 63.9
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.5e-30 137.5 233 43.8
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.0e-30 137.1 90 73.3
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.6e-30 136.7 174 50.6
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 2.6e-30 136.7 177 48.6
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 2.6e-30 136.7 231 42.4
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 3.4e-30 136.3 113 62.8
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 5.7e-30 135.6 232 42.7
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 5.7e-30 135.6 168 51.2
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 5.7e-30 135.6 250 39.2
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 9.8e-30 134.8 107 65.4
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 2.8e-29 133.3 233 43.3
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 3.7e-29 132.9 90 70.0
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 4.9e-29 132.5 112 62.5
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 8.3e-29 131.7 90 71.1
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 8.3e-29 131.7 245 39.2
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 8.3e-29 131.7 114 60.5
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.1e-28 131.3 90 71.1
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 1.1e-28 131.3 174 48.9
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.1e-28 131.3 108 61.1
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.1e-28 131.3 129 52.7
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.8e-28 130.6 90 68.9
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.8e-28 130.6 239 41.8
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 3.1e-28 129.8 107 62.6
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 3.1e-28 129.8 107 62.6
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 3.1e-28 129.8 107 62.6
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 3.1e-28 129.8 107 62.6
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 3.1e-28 129.8 107 62.6
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 3.1e-28 129.8 166 47.6
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 3.1e-28 129.8 90 73.3
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 4.1e-28 129.4 90 70.0
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 4.1e-28 129.4 90 66.7
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 5.4e-28 129.0 138 50.7
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 5.4e-28 129.0 232 41.8
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 7.0e-28 128.6 106 61.3
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 9.2e-28 128.3 179 45.8
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 9.2e-28 128.3 179 45.8
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 9.2e-28 128.3 109 60.6
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 9.2e-28 128.3 110 62.7
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.2e-27 127.9 171 47.4
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.2e-27 127.9 133 54.1
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 1.6e-27 127.5 110 64.5
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.6e-27 127.5 234 40.6
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 2.0e-27 127.1 97 68.0
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 3.5e-27 126.3 97 66.0
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 3.5e-27 126.3 97 66.0
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 3.5e-27 126.3 110 60.0
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 4.5e-27 125.9 110 59.1
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 5.9e-27 125.6 232 38.8
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 7.8e-27 125.2 93 69.9
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 7.8e-27 125.2 88 71.6
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.0e-26 124.8 110 61.8
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 1.3e-26 124.4 90 66.7
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.7e-26 124.0 234 39.3
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 2.9e-26 123.2 112 58.9
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 2.9e-26 123.2 113 56.6
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.9e-26 123.2 190 40.5
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 3.8e-26 122.9 126 54.0
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 3.8e-26 122.9 116 56.9
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 3.8e-26 122.9 243 38.7
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 3.8e-26 122.9 130 56.2
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 3.8e-26 122.9 110 58.2
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 3.8e-26 122.9 110 58.2
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 3.8e-26 122.9 110 58.2
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 5.0e-26 122.5 194 40.2
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 5.0e-26 122.5 97 63.9
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 5.0e-26 122.5 83 73.5
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 8.6e-26 121.7 232 39.7
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 8.6e-26 121.7 113 55.8
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 1.9e-25 120.6 83 72.3
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 2.5e-25 120.2 113 54.0
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 2.5e-25 120.2 113 54.0
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 2.5e-25 120.2 83 69.9
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 3.3e-25 119.8 113 54.0
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 5.6e-25 119.0 208 38.5
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 9.5e-25 118.2 116 56.0
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 1.6e-24 117.5 103 58.3
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.6e-24 117.5 88 63.6
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 2.8e-24 116.7 90 63.3
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 2.8e-24 116.7 144 50.0
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 3.6e-24 116.3 109 55.0
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 4.7e-24 115.9 82 68.3
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 4.7e-24 115.9 88 59.1
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 6.1e-24 115.5 107 58.9
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 6.1e-24 115.5 107 58.9
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 6.1e-24 115.5 83 68.7
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 8.0e-24 115.2 83 66.3
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 8.0e-24 115.2 114 56.1
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 1.0e-23 114.8 111 55.9
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.8e-23 114.0 138 48.6
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.8e-23 114.0 75 72.0
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.8e-23 114.0 83 69.9
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 2.3e-23 113.6 107 53.3
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 4.0e-23 112.8 106 58.5
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 8.9e-23 111.7 99 53.5
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 2.0e-22 110.5 138 48.6
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 3.4e-22 109.8 88 59.1
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 5.7e-22 109.0 83 63.9
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 2.9e-21 106.7 213 34.3
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 4.9e-21 105.9 81 65.4
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 6.4e-21 105.5 67 74.6
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 3.2e-20 103.2 95 55.8
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 5.4e-20 102.4 78 60.3
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 7.8e-19 98.6 203 36.5
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 1.0e-18 98.2 154 39.6
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 1.3e-18 97.8 100 50.0
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 5.6e-17 92.4 107 43.9
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-16 91.3 80 56.2
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-16 91.3 80 56.2
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 3.1e-15 86.7 74 54.1
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 7.5e-14 82.0 50 82.0
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 2.4e-12 77.0 43 86.0
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 1.5e-06 57.8 32 87.5


User provided reference genes

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