Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.9e-57 225.7 120 100.0
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 3.7e-53 211.5 120 94.2
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 4.2e-41 171.4 117 79.5
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 1.4e-39 166.4 124 76.6
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 5.9e-35 151.0 120 68.3
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 2.2e-29 132.5 102 69.6
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 3.7e-29 131.7 120 64.2
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 6.3e-29 131.0 158 52.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 3.1e-28 128.6 118 62.7
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 5.3e-28 127.9 110 60.0
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 1.6e-27 126.3 116 63.8
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 2.6e-27 125.6 117 59.0
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 3.5e-27 125.2 115 58.3
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 3.5e-27 125.2 110 60.9
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 3.5e-27 125.2 118 61.0
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 7.7e-27 124.0 116 58.6
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 1.3e-26 123.2 110 60.9
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 1.3e-26 123.2 102 65.7
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 1.3e-26 123.2 116 62.9
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 1.7e-26 122.9 111 60.4
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 3.8e-26 121.7 110 60.0
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 8.5e-26 120.6 110 60.0
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 2.5e-25 119.0 116 59.5
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 3.2e-25 118.6 104 64.4
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 4.2e-25 118.2 113 59.3
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 4.2e-25 118.2 111 59.5
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 4.2e-25 118.2 98 63.3
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 5.5e-25 117.9 110 59.1
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 9.4e-25 117.1 98 56.1
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 2.1e-24 115.9 97 63.9
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 2.1e-24 115.9 120 58.3
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 2.7e-24 115.5 111 57.7
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 3.6e-24 115.2 116 59.5
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 4.7e-24 114.8 121 52.9
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 6.1e-24 114.4 115 58.3
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 8.0e-24 114.0 116 56.9
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 8.0e-24 114.0 108 62.0
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 8.0e-24 114.0 119 55.5
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 8.0e-24 114.0 97 62.9
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 1.0e-23 113.6 117 58.1
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.0e-23 113.6 113 59.3
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 1.0e-23 113.6 110 59.1
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.0e-23 113.6 100 63.0
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 1.4e-23 113.2 116 56.0
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 1.8e-23 112.8 97 61.9
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.8e-23 112.8 100 62.0
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 1.8e-23 112.8 124 56.5
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 2.3e-23 112.5 113 58.4
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 3.0e-23 112.1 110 56.4
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 4.0e-23 111.7 97 61.9
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 4.0e-23 111.7 117 53.8
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 5.2e-23 111.3 109 55.0
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 6.7e-23 110.9 123 52.0
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 1.5e-22 109.8 94 62.8
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.5e-22 109.8 94 62.8
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 2.0e-22 109.4 106 56.6
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 2.6e-22 109.0 106 56.6
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 3.3e-22 108.6 97 59.8
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 3.3e-22 108.6 119 52.9
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 3.3e-22 108.6 116 53.4
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 3.3e-22 108.6 108 56.5
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 5.7e-22 107.8 121 53.7
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 9.7e-22 107.1 111 58.6
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 1.7e-21 106.3 112 56.2
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 1.7e-21 106.3 112 57.1
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 6.3e-21 104.4 95 62.1
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 8.3e-21 104.0 116 53.4
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 1.8e-20 102.8 117 52.1
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 2.4e-20 102.4 123 51.2
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 2.4e-20 102.4 102 54.9
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 3.1e-20 102.1 126 48.4
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 3.1e-20 102.1 119 52.9
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 3.1e-20 102.1 104 57.7
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 7.0e-20 100.9 115 54.8
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 7.0e-20 100.9 108 52.8
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 7.0e-20 100.9 108 52.8
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 1.6e-19 99.8 100 56.0
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.0e-19 99.4 108 51.9
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 3.5e-19 98.6 99 60.6
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 5.9e-19 97.8 99 54.5
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 1.0e-18 97.1 98 54.1
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 1.3e-18 96.7 80 63.8
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.7e-18 96.3 97 55.7
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 2.9e-18 95.5 95 58.9
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.9e-18 95.5 96 54.2
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 3.8e-18 95.1 116 52.6
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 3.8e-18 95.1 116 52.6
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 3.8e-18 95.1 116 52.6
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 3.8e-18 95.1 116 52.6
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 3.8e-18 95.1 102 56.9
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.1e-17 93.6 113 52.2
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 1.1e-17 93.6 121 46.3
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.5e-17 93.2 115 52.2
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 1.9e-17 92.8 116 49.1
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 4.2e-17 91.7 92 62.0
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 9.4e-17 90.5 112 52.7
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 2.1e-16 89.4 116 50.0
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 2.1e-16 89.4 77 58.4
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 1.8e-15 86.3 95 55.8
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 1.8e-15 86.3 96 46.9
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 4.0e-15 85.1 116 45.7
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 2.0e-14 82.8 80 60.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 1.3e-13 80.1 59 64.4
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 2.8e-13 79.0 97 53.6
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.1e-12 77.0 108 48.1
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 3.1e-12 75.5 94 48.9
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 7.0e-12 74.3 98 46.9
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 8.6e-10 67.4 102 41.2
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 1.9e-09 66.2 65 58.5
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 1.9e-09 66.2 91 47.3
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 2.5e-09 65.9 91 45.1
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 5.5e-09 64.7 87 51.7
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 9.5e-09 63.9 109 41.3


User provided reference genes

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