Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.6e-100 368.6 173 100.0
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.0e-96 355.1 173 94.8
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.2e-84 316.6 173 83.2
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 9.6e-79 297.0 173 78.0
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 2.4e-69 265.8 172 69.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 4.0e-69 265.0 165 72.1
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.3e-69 264.6 167 70.1
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 5.3e-69 264.6 164 72.0
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 6.9e-69 264.2 166 71.7
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 6.9e-69 264.2 166 71.7
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.4e-68 261.9 164 71.3
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 4.5e-68 261.5 167 71.9
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 4.5e-68 261.5 167 69.5
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 7.6e-68 260.8 166 71.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 7.6e-68 260.8 167 70.7
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 9.9e-68 260.4 166 71.1
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-67 260.0 166 71.1
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.3e-67 260.0 171 65.5
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.7e-67 259.6 167 69.5
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.7e-67 259.6 166 71.7
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.2e-67 259.2 167 68.9
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 2.2e-67 259.2 170 71.2
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 3.8e-67 258.5 170 68.2
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 4.9e-67 258.1 167 71.3
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 8.4e-67 257.3 166 68.7
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 8.4e-67 257.3 166 71.1
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.4e-67 257.3 166 69.9
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.4e-67 257.3 166 69.9
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.4e-66 256.5 167 69.5
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.9e-66 256.1 166 70.5
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.4e-66 255.8 164 70.7
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.4e-66 255.8 166 68.7
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.4e-66 255.8 166 68.7
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.2e-66 255.4 165 69.1
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 4.2e-66 255.0 166 71.1
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 5.4e-66 254.6 164 70.1
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.4e-66 254.6 165 68.5
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.2e-65 253.4 166 68.7
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.6e-65 253.1 167 68.9
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 2.1e-65 252.7 161 70.2
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 2.1e-65 252.7 164 68.9
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 3.5e-65 251.9 164 69.5
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 7.9e-65 250.8 165 69.1
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 3.0e-64 248.8 166 68.7
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 3.9e-64 248.4 166 67.5
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 5.1e-64 248.1 166 69.3
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 6.7e-64 247.7 168 67.3
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.3e-63 245.4 166 67.5
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.3e-63 245.4 166 68.7
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.8e-62 242.3 166 67.5
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 6.2e-62 241.1 167 65.3
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.4e-61 240.0 169 65.1
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.8e-61 239.6 167 67.1
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.8e-61 239.6 164 67.7
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 3.1e-61 238.8 166 65.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 3.1e-61 238.8 167 67.1
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 9.0e-61 237.3 166 66.9
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 9.0e-61 237.3 166 66.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.0e-60 236.1 165 65.5
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 2.6e-60 235.7 164 65.2
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 2.6e-60 235.7 167 66.5
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 3.4e-60 235.3 166 65.7
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 3.4e-60 235.3 166 67.5
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 4.5e-60 235.0 166 65.1
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 5.8e-60 234.6 164 65.2
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 1.3e-59 233.4 159 66.0
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 1.3e-59 233.4 167 67.1
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.3e-59 233.4 167 67.1
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.2e-59 232.6 165 64.2
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 3.8e-59 231.9 166 66.9
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 4.9e-59 231.5 162 65.4
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.1e-58 230.3 163 65.6
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 1.4e-58 229.9 164 63.4
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 1.4e-58 229.9 163 65.6
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.9e-58 229.6 162 65.4
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 1.9e-58 229.6 165 63.6
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.9e-58 229.6 166 66.3
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 5.5e-58 228.0 167 64.7
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 5.7e-55 218.0 166 62.7
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 9.6e-55 217.2 166 62.0
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 9.6e-55 217.2 170 63.5
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.8e-53 213.0 165 60.6
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 3.1e-53 212.2 171 60.8
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 2.6e-52 209.1 142 66.9
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 5.8e-52 208.0 141 66.0
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 5.0e-51 204.9 141 65.2
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.4e-50 203.4 158 61.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.9e-50 203.0 167 58.7
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 5.5e-50 201.4 143 66.4
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 9.3e-50 200.7 165 58.2
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.6e-49 199.9 130 67.7
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.6e-49 199.9 168 57.7
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 9.7e-47 190.7 167 56.3
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 2.2e-46 189.5 158 53.2
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 4.8e-46 188.3 138 62.3
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 6.3e-46 188.0 167 56.3
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.4e-45 186.8 165 56.4
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 3.1e-45 185.7 129 68.2
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.9e-44 181.4 118 68.6
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 5.9e-44 181.4 167 53.3
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.0e-43 180.6 165 54.5
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 3.2e-42 175.6 169 53.3
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 2.5e-39 166.0 174 51.7
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 4.3e-39 165.2 161 49.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 7.4e-39 164.5 175 49.1
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.5e-36 156.8 152 52.6
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.5e-36 155.2 152 49.3
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 7.7e-36 154.5 161 46.6
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.6e-33 146.7 167 41.3
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 9.7e-31 137.5 139 49.6
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 2.8e-30 136.0 85 72.9
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 3.5e-28 129.0 151 45.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.5e-27 124.4 166 41.0
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.1e-26 124.0 90 65.6
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 5.5e-26 121.7 130 50.8
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 5.2e-24 115.2 98 56.1
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.4e-16 90.5 51 74.5
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 7.5e-15 84.7 153 35.3
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 9.4e-10 67.8 121 35.5
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 1.2e-09 67.4 42 73.8


User provided reference genes

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