Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 1.1e-17 92.0 41 100.0
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 6.7e-15 82.8 40 87.5
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 5.7e-14 79.7 40 82.5
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.3e-13 78.6 41 78.0
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.3e-13 78.6 41 78.0
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.7e-13 78.2 40 80.0
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 1.7e-13 78.2 40 80.0
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.7e-13 78.2 40 80.0
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.7e-13 78.2 40 82.5
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 2.2e-13 77.8 41 78.0
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.2e-13 77.8 40 80.0
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.2e-13 77.8 40 80.0
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.2e-13 77.8 40 80.0
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 2.8e-13 77.4 40 80.0
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.8e-13 77.4 40 77.5
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 3.7e-13 77.0 40 77.5
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 4.8e-13 76.6 40 77.5
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 4.8e-13 76.6 41 80.5
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 4.8e-13 76.6 40 77.5
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 6.3e-13 76.3 40 77.5
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 6.3e-13 76.3 36 86.1
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 6.3e-13 76.3 40 80.0
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 6.3e-13 76.3 40 75.0
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 8.2e-13 75.9 41 78.0
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 8.2e-13 75.9 36 86.1
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 8.2e-13 75.9 36 83.3
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 8.2e-13 75.9 40 80.0
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.1e-12 75.5 40 75.0
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 1.1e-12 75.5 40 75.0
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 1.1e-12 75.5 40 75.0
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.1e-12 75.5 40 75.0
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 1.1e-12 75.5 40 75.0
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.1e-12 75.5 37 83.8
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 1.4e-12 75.1 39 76.9
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 1.4e-12 75.1 40 75.0
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.4e-12 75.1 40 77.5
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.4e-12 75.1 40 77.5
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.4e-12 75.1 40 77.5
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.8e-12 74.7 36 83.3
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.8e-12 74.7 39 76.9
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.8e-12 74.7 37 83.8
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 1.8e-12 74.7 39 74.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.8e-12 74.7 40 72.5
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 1.8e-12 74.7 40 72.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.8e-12 74.7 40 72.5
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.4e-12 74.3 40 70.0
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 2.4e-12 74.3 36 83.3
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 2.4e-12 74.3 37 78.4
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 3.1e-12 73.9 37 78.4
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 3.1e-12 73.9 39 74.4
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 3.1e-12 73.9 36 86.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 3.1e-12 73.9 40 72.5
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.1e-12 73.6 40 72.5
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 4.1e-12 73.6 36 83.3
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 4.1e-12 73.6 40 75.0
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 4.1e-12 73.6 40 77.5
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 4.1e-12 73.6 40 77.5
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 5.3e-12 73.2 36 83.3
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 5.3e-12 73.2 36 83.3
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 5.3e-12 73.2 36 80.6
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 5.3e-12 73.2 40 75.0
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 5.3e-12 73.2 36 83.3
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 7.0e-12 72.8 40 75.0
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 7.0e-12 72.8 37 78.4
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 9.1e-12 72.4 36 80.6
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 9.1e-12 72.4 36 80.6
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.2e-11 72.0 40 70.0
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.6e-11 71.6 36 77.8
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 1.6e-11 71.6 37 75.7
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.6e-11 71.6 36 77.8
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.6e-11 71.6 37 75.7
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 2.0e-11 71.2 40 72.5
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 2.0e-11 71.2 36 83.3
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 2.0e-11 71.2 40 70.0
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 2.6e-11 70.9 39 69.2
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 3.5e-11 70.5 37 73.0
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 3.5e-11 70.5 40 70.0
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.7e-10 68.2 37 73.0
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 1.7e-10 68.2 40 65.0
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.9e-10 67.4 36 72.2
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 2.9e-10 67.4 36 72.2
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 2.9e-10 67.4 36 72.2
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 2.9e-10 67.4 36 72.2
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 3.8e-10 67.0 37 70.3
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 8.5e-10 65.9 32 84.4
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 7.2e-09 62.8 37 67.6
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 7.2e-09 62.8 40 62.5
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 3.6e-08 60.5 37 64.9
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.8e-07 58.2 38 65.8
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 2.3e-07 57.8 36 63.9
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 6.7e-07 56.2 41 65.9
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 6.7e-07 56.2 29 75.9
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 8.8e-07 55.8 36 69.4
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.1e-06 55.5 36 66.7
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 7.5e-06 52.8 25 84.0


User provided reference genes

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