Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.6e-183 645.6 407 100.0
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 7.8e-172 607.4 408 95.1
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 2.5e-114 416.4 432 73.4
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 7.0e-96 355.1 431 65.0
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 1.8e-75 287.3 483 52.2
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 5.4e-64 249.2 487 46.4
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 6.2e-60 235.7 513 39.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 2.3e-59 233.8 508 39.8
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.1e-59 233.4 495 42.0
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 2.9e-57 226.9 508 44.3
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 2.4e-56 223.8 454 43.2
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.6e-55 221.1 454 43.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 4.3e-53 213.0 497 39.4
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.6e-53 212.6 479 41.1
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 6.8e-51 205.7 520 38.1
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 3.4e-50 203.4 465 39.6
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 5.8e-50 202.6 501 38.5
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 5.8e-50 202.6 458 39.3
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 3.7e-49 199.9 484 39.9
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.1e-48 198.4 439 49.7
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 2.4e-48 197.2 432 43.8
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 7.1e-48 195.7 435 39.8
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 2.1e-47 194.1 455 39.3
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.1e-47 194.1 472 37.9
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.7e-47 193.7 498 36.7
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 3.5e-47 193.4 413 40.2
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 1.7e-46 191.0 444 38.5
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 1.9e-45 187.6 436 40.8
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 9.6e-45 185.3 498 36.1
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 9.6e-45 185.3 498 36.1
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.6e-44 184.5 527 35.5
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 3.6e-44 183.3 397 40.1
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 8.1e-44 182.2 514 37.7
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.1e-43 181.8 461 38.0
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 1.8e-43 181.0 496 35.5
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.4e-43 180.6 239 48.5
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 2.4e-43 180.6 509 37.1
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 6.8e-43 179.1 488 36.7
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 6.8e-43 179.1 498 37.1
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 2.0e-42 177.6 421 40.6
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.6e-42 177.2 445 39.8
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 3.4e-42 176.8 230 53.0
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 7.6e-42 175.6 478 37.2
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.3e-41 174.9 475 37.3
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 4.9e-41 172.9 469 35.4
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.4e-41 172.6 497 36.4
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 8.4e-41 172.2 495 35.6
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 2.4e-40 170.6 463 42.5
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.2e-40 169.9 494 36.8
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 5.4e-40 169.5 431 38.1
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.6e-39 167.9 462 36.6
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 2.7e-39 167.2 415 45.5
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 4.6e-39 166.4 419 42.2
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 4.6e-39 166.4 117 71.8
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 7.8e-39 165.6 491 36.7
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 7.8e-39 165.6 487 35.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.3e-38 164.9 415 40.2
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 5.1e-38 162.9 491 36.7
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.1e-37 161.8 418 44.5
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 1.1e-37 161.8 186 55.4
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 3.3e-37 160.2 244 44.3
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 9.0e-35 152.1 418 40.4
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 9.0e-35 152.1 431 37.6
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 1.5e-34 151.4 417 41.2
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.5e-34 151.4 507 37.5
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 1.5e-34 151.4 497 35.0
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 7.6e-34 149.1 224 48.7
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.7e-33 147.9 430 33.7
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 2.9e-33 147.1 383 36.8
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.4e-32 144.8 434 37.3
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 1.9e-32 144.4 591 35.9
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 2.4e-32 144.1 509 32.6
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 5.4e-32 142.9 438 34.7
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.7e-31 140.6 426 33.6
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 3.5e-31 140.2 489 34.6
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 7.8e-31 139.0 134 59.0
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 1.7e-30 137.9 539 32.7
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.9e-30 136.7 184 47.3
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 1.5e-29 134.8 474 32.5
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 4.3e-29 133.3 516 30.6
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 1.6e-28 131.3 441 34.0
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.6e-28 130.2 482 32.6
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.6e-28 130.2 235 45.1
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 2.4e-27 127.5 436 31.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 4.0e-27 126.7 435 35.6
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 6.9e-27 125.9 429 33.6
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 9.0e-27 125.6 429 33.3
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.2e-26 125.2 446 41.5
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 4.5e-26 123.2 477 31.7
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.9e-25 120.6 426 32.2
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 6.4e-25 119.4 415 41.9
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 5.4e-24 116.3 425 37.6
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.2e-23 115.2 418 32.8
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.1e-23 114.4 440 31.8
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 4.6e-23 113.2 129 55.0
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 7.9e-23 112.5 422 33.4
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.3e-22 110.9 113 54.0
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 8.7e-22 109.0 78 73.1
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 5.6e-21 106.3 450 30.7
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.8e-20 104.0 479 30.5
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 4.8e-20 103.2 425 31.8
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 4.0e-19 100.1 368 38.3
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 4.0e-19 100.1 368 38.3
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 9.0e-19 99.0 425 31.8
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 3.4e-18 97.1 582 27.5
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 4.9e-17 93.2 371 38.0
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 8.4e-17 92.4 198 39.9
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 1.1e-16 92.0 76 69.7
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.5e-16 90.9 441 31.1
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 7.9e-15 85.9 228 36.4
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 3.9e-14 83.6 374 31.0
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.5e-13 80.9 63 65.1
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 2.1e-12 77.8 394 36.5
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 9.0e-11 72.4 386 31.1
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 2.7e-07 60.8 398 30.7
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.8e-06 58.2 114 43.9
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.8e-06 58.2 114 43.9
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.3e-06 57.8 104 37.5
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 3.0e-06 57.4 445 28.5
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 3.0e-06 57.4 393 38.2


User provided reference genes

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