Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 0.0e+00 1161.0 590 100.0
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.8e-217 759.6 590 68.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 9.5e-187 657.5 591 61.4
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.2e-177 625.2 591 59.1
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 9.9e-176 620.9 591 56.7
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 8.9e-169 597.8 596 55.7
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.9e-167 592.8 592 55.1
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 6.0e-165 585.1 591 54.1
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.7e-164 583.6 608 54.1
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.7e-164 583.6 597 53.8
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 4.3e-163 578.9 606 53.5
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 7.3e-163 578.2 593 55.6
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 4.8e-162 575.5 592 53.9
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.4e-161 573.2 590 53.4
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 3.1e-161 572.8 593 53.5
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 3.1e-161 572.8 591 53.8
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.0e-161 572.4 594 53.4
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 4.0e-161 572.4 591 53.8
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.9e-161 571.6 424 76.2
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.4e-160 569.3 594 53.2
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 3.4e-160 569.3 591 51.4
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 3.4e-160 569.3 590 52.9
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.8e-160 568.5 591 53.5
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 2.9e-159 566.2 597 52.4
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.9e-158 563.5 591 52.1
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 4.2e-158 562.4 595 52.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.1e-158 561.6 591 51.8
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.6e-157 560.5 591 51.8
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.3e-156 557.4 592 51.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.1e-155 554.3 634 49.2
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 2.5e-155 553.1 590 52.2
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 3.6e-154 549.3 592 50.2
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.1e-153 547.7 593 51.9
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 3.1e-153 546.2 593 50.3
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.2e-152 544.3 591 49.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.5e-152 543.9 596 50.5
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 2.0e-152 543.5 590 52.2
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.6e-152 543.1 600 51.2
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 4.5e-152 542.3 591 52.3
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 5.8e-152 542.0 590 51.7
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.3e-151 540.8 590 51.7
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.7e-151 540.4 590 51.2
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 2.2e-151 540.0 592 50.7
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.1e-150 537.7 591 50.9
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 3.2e-150 536.2 591 50.9
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 5.5e-150 535.4 594 50.7
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 7.1e-150 535.0 593 51.4
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.2e-149 534.3 595 49.9
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 2.7e-149 533.1 592 52.4
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 7.9e-149 531.6 598 50.7
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 7.9e-149 531.6 590 50.3
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.8e-148 530.4 591 49.9
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 2.3e-148 530.0 593 49.7
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.9e-148 529.3 596 49.5
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 8.7e-148 528.1 590 51.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-147 527.7 596 50.3
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 1.9e-147 526.9 592 50.0
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.5e-147 526.6 594 49.7
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 4.3e-147 525.8 594 49.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 4.3e-147 525.8 591 50.3
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 4.3e-147 525.8 591 50.4
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.3e-146 524.2 592 50.5
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.8e-145 520.4 590 49.8
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.8e-145 520.4 590 49.8
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 2.4e-145 520.0 594 49.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 3.1e-145 519.6 590 49.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 5.3e-145 518.8 592 49.2
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 1.5e-144 517.3 593 49.4
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 2.0e-144 516.9 594 49.2
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 3.4e-144 516.2 592 49.5
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 3.4e-144 516.2 594 49.0
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 3.4e-144 516.2 592 48.1
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 7.6e-144 515.0 592 49.2
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.7e-143 513.8 594 49.5
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 3.2e-142 509.6 456 59.6
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 4.2e-142 509.2 596 47.3
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 5.5e-142 508.8 591 47.9
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 7.1e-142 508.4 548 52.7
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 2.7e-141 506.5 594 48.3
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.9e-140 502.7 633 46.6
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 8.7e-140 501.5 591 48.9
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.5e-139 500.7 578 48.4
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 5.7e-139 498.8 565 48.3
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 1.6e-138 497.3 632 44.9
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 4.1e-137 492.7 592 48.3
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 3.4e-136 489.6 515 53.8
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.4e-136 489.6 539 51.9
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 1.0e-135 488.0 574 47.7
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.7e-135 487.3 598 46.8
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.4e-134 484.2 601 47.4
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.4e-129 467.6 592 44.4
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 5.3e-129 465.7 532 50.4
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 6.9e-129 465.3 590 46.9
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 2.2e-122 443.7 613 44.9
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 3.1e-121 439.9 617 43.4
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 1.6e-112 411.0 539 45.5
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 8.8e-108 395.2 425 51.5
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 1.4e-105 387.9 597 40.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.1e-101 374.0 550 40.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 7.0e-97 359.0 464 45.9
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 3.7e-90 336.7 595 36.8
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 3.1e-89 333.6 424 46.7
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.2e-88 331.6 432 44.9
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 7.5e-83 312.4 596 36.2
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.5e-75 288.1 466 40.8
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 2.0e-72 277.7 227 63.0
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.7e-72 277.3 196 69.9
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 1.0e-71 275.4 405 44.2
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.7e-71 274.6 370 44.3
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.3e-68 264.2 537 35.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 6.0e-56 223.0 435 35.2
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 7.8e-56 222.6 532 33.5
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.2e-53 215.3 426 33.3
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 4.4e-51 206.8 454 35.7
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.8e-50 203.8 222 53.2
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 4.6e-48 196.8 139 69.1
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.0e-47 195.7 156 63.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 8.7e-47 192.6 619 28.6
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 2.2e-42 177.9 287 38.0
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.5e-40 170.6 128 68.8
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.5e-40 170.6 128 68.8
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 7.1e-33 146.4 111 64.9
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 4.8e-21 107.1 60 81.7
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 9.0e-20 102.8 116 46.6
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.2e-19 102.4 588 22.6
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.9e-17 95.1 76 55.3
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.2e-17 94.4 53 79.2
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.2e-17 93.2 96 50.0
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.1e-15 87.0 80 53.8
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 3.3e-14 84.3 265 28.7
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 4.8e-13 80.5 65 61.5
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 1.4e-09 68.9 91 47.3
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 1.4e-09 68.9 91 47.3
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.0e-06 58.5 71 46.5


User provided reference genes

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