Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030273 Chenopodium quinoa HOM05D007386 ORTHO05D009210 1.7e-77 292.7 167 100.0
AUR62018389 Chenopodium quinoa HOM05D000027 ORTHO05D000066 1.2e-73 280.0 167 94.0
EL10Ac3g07280 Beta vulgaris HOM05D007386 ORTHO05D009210 2.6e-65 252.3 165 83.6
Ah.04g150680 Amaranthus hybridus HOM05D007386 ORTHO05D009210 3.7e-59 231.9 169 83.4
Sc05g0001200 Simmondsia chinensis HOM05D007386 ORTHO05D009210 6.0e-46 188.0 172 60.5
Hund09518 Selenicereus undatus HOM05D007386 ORTHO05D009210 1.8e-45 186.4 134 73.1
TWI18G1441 Tripterygium wilfordii HOM05D007386 ORTHO05D009210 6.7e-45 184.5 168 61.3
HanXRQChr10g0282251 Helianthus annuus HOM05D007386 ORTHO05D009210 6.3e-43 177.9 167 64.7
GSVIVG01001191001 Vitis vinifera HOM05D007386 ORTHO05D009210 8.2e-43 177.6 167 67.7
ECA247G1531 Erigeron canadensis HOM05D007386 ORTHO05D009210 2.4e-42 176.0 177 62.1
Duzib168G0678 Durio zibethinus HOM05D007386 ORTHO05D009210 1.2e-41 173.7 169 57.4
SalBow4G1029 Salvia bowleyana HOM05D007386 ORTHO05D009210 2.6e-41 172.6 174 58.6
Eucgr.K03341 Eucalyptus grandis HOM05D007386 ORTHO05D009210 5.9e-41 171.4 175 63.4
Rhsim13G0027600 Rhododendron simsii HOM05D007386 ORTHO05D009210 5.9e-41 171.4 183 55.7
Manes.05G078600 Manihot esculenta HOM05D007386 ORTHO05D009210 7.6e-41 171.0 178 55.6
PGR044G1958 Punica granatum HOM05D007386 ORTHO05D009210 7.6e-41 171.0 174 57.5
Nn6g34127 Nelumbo nucifera HOM05D007386 ORTHO05D009210 1.3e-40 170.2 177 60.5
CSS0002766 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 2.9e-40 169.1 169 59.8
Medtr1g071630 Medicago truncatula HOM05D007386 ORTHO05D009210 3.8e-40 168.7 170 59.4
Actinidia00789 Actinidia chinensis HOM05D007386 ORTHO05D009210 5.0e-40 168.3 181 55.8
CSS0036584 Camellia sinensis var. sinensis HOM05D007386 ORTHO05D009210 5.0e-40 168.3 179 58.7
COL.COLO4_25451 Corchorus olitorius HOM05D007386 ORTHO05D009210 1.1e-39 167.2 166 64.5
TAR636G2514 Trochodendron aralioides HOM05D007386 ORTHO05D009210 1.1e-39 167.2 182 54.9
Ca_09739_v3 Cicer arietinum L. HOM05D007386 ORTHO05D009210 1.9e-39 166.4 170 66.5
Lalb_Chr06g0162851 Lupinus albus HOM05D007386 ORTHO05D009210 1.9e-39 166.4 172 58.1
Cfa006177 Carpinus fangiana HOM05D007386 ORTHO05D009210 2.5e-39 166.0 181 57.5
Sabra05G0162700 Salix brachista HOM05D007386 ORTHO05D009210 2.5e-39 166.0 170 65.9
Glyma.02G145500 Glycine max HOM05D007386 ORTHO05D009210 3.2e-39 165.6 172 55.2
arahy.Tifrunner.gnm1.ann1.ZF8TUR Arachis hypogaea HOM05D007386 ORTHO05D009210 4.2e-39 165.2 126 66.7
MSTRG.21545 Avicennia marina HOM05D007386 ORTHO05D009210 4.2e-39 165.2 129 71.3
CiPaw.07G088700 Carya illinoinensis HOM05D007386 ORTHO05D009210 4.2e-39 165.2 180 58.9
Cpa.g.sc95.34 Carica papaya HOM05D007386 ORTHO05D009210 7.2e-39 164.5 171 57.3
QL12p020752 Quercus lobata HOM05D007386 ORTHO05D009210 9.3e-39 164.1 176 54.5
Haze_04670 Corylus avellana HOM05D007386 ORTHO05D009210 2.1e-38 162.9 127 66.1
DCAR_018437 Daucus carota HOM05D007386 ORTHO05D009210 2.1e-38 162.9 173 56.6
Gohir.A08G081100 Gossypium hirsutum HOM05D007386 ORTHO05D009210 2.7e-38 162.5 124 67.7
arahy.Tifrunner.gnm1.ann1.JNW8E7 Arachis hypogaea HOM05D007386 ORTHO05D009210 3.6e-38 162.2 126 65.9
Glyma.10G028600 Glycine max HOM05D007386 ORTHO05D009210 3.6e-38 162.2 172 61.0
Gohir.D08G093000 Gossypium hirsutum HOM05D007386 ORTHO05D009210 3.6e-38 162.2 171 59.1
Thecc.09G179900 Theobroma cacao HOM05D007386 ORTHO05D009210 4.6e-38 161.8 138 61.6
VMungo0720G1463 Vigna mungo HOM05D007386 ORTHO05D009210 4.6e-38 161.8 173 53.8
Potri.005G213000 Populus trichocarpa HOM05D007386 ORTHO05D009210 6.1e-38 161.4 170 65.9
vmacro02599 Vaccinium macrocarpon HOM05D007386 ORTHO05D009210 6.1e-38 161.4 183 60.1
Gorai.004G098600 Gossypium raimondii HOM05D007386 ORTHO05D009210 7.9e-38 161.0 140 62.1
TPR.G25681 Trifolium pratense HOM05D007386 ORTHO05D009210 1.8e-37 159.8 176 58.0
Phvul.007G173800 Phaseolus vulgaris HOM05D007386 ORTHO05D009210 2.3e-37 159.5 173 54.9
CANSAT78G1636 Cannabis sativa HOM05D007386 ORTHO05D009210 3.9e-37 158.7 179 50.8
Oeu059791.1 Olea europaea HOM05D007386 ORTHO05D009210 1.9e-36 156.4 172 54.7
Psat6g059880 Pisum sativum HOM05D007386 ORTHO05D009210 4.3e-36 155.2 122 66.4
ClCG09G007290 Citrullus lanatus HOM05D007386 ORTHO05D009210 3.7e-35 152.1 179 52.0
MBI11_g22999_MAGBIO Magnolia biondii HOM05D007386 ORTHO05D009210 1.1e-34 150.6 125 65.6
Prupe.8G236700 Prunus persica HOM05D007386 ORTHO05D009210 1.4e-34 150.2 181 56.9
MELO3C015793.2 Cucumis melo HOM05D007386 ORTHO05D009210 4.1e-34 148.7 186 52.2
Lsat_1_v5_gn_9_6101 Lactuca sativa HOM05D007386 ORTHO05D009210 4.1e-34 148.7 138 61.6
Dinv34778 Davidia involucrata HOM05D002659 ORTHO05D002940 6.9e-34 147.9 112 69.6
CDE06G2441 Ceratophyllum demersum HOM05D007386 ORTHO05D009210 8.5e-32 141.0 171 54.4
HPP92_020354 Vanilla planifolia HOM05D007386 ORTHO05D009210 1.9e-31 139.8 174 51.1
Cc01_g19160 Coffea canephora HOM05D007386 ORTHO05D009210 2.5e-31 139.4 132 59.1
Nitab4.5_0009452g0010 Nicotiana tabacum HOM05D007386 ORTHO05D009210 7.2e-31 137.9 183 50.8
ATR0665G488 Amborella trichopoda HOM05D007386 ORTHO05D009210 1.2e-30 137.1 121 61.2
Nitab4.5_0000252g0090 Nicotiana tabacum HOM05D007386 ORTHO05D009210 2.7e-30 136.0 180 50.0
Aqoxy5G00426 Aquilegia oxysepala HOM05D007386 ORTHO05D009210 3.6e-30 135.6 183 49.2
Lj5g0008996 Lotus japonicus HOM05D007386 ORTHO05D009210 3.6e-30 135.6 135 60.7
Ciclev10022575m.g Citrus clementina HOM05D007386 ORTHO05D009210 6.1e-30 134.8 139 55.4
THA.LOC104813154 Tarenaya hassleriana HOM05D007386 ORTHO05D009210 7.9e-30 134.4 125 55.2
BcaC04g21312 Brassica carinata HOM05D007386 ORTHO05D009210 1.1e-28 130.6 139 52.5
C09p33290 Brassica napus HOM05D007386 ORTHO05D009210 1.1e-28 130.6 139 52.5
BolC9t56165H Brassica oleracea HOM05D007386 ORTHO05D009210 1.1e-28 130.6 139 52.5
Sp6g04310 Schrenkiella parvula HOM05D007386 ORTHO05D009210 1.1e-28 130.6 139 52.5
Migut.D00331 Erythranthe guttata HOM05D007386 ORTHO05D009210 1.5e-28 130.2 119 63.9
CARHR252930 Cardamine hirsuta HOM05D007386 ORTHO05D009210 2.0e-28 129.8 123 55.3
A09p26200 Brassica napus HOM05D007386 ORTHO05D009210 5.7e-28 128.3 130 53.1
BraA09t38188Z Brassica rapa HOM05D007386 ORTHO05D009210 5.7e-28 128.3 130 53.1
Peaxi162Scf00230g01010 Petunia axillaris HOM05D007386 ORTHO05D009210 5.7e-28 128.3 168 55.4
BcaB01g01820 Brassica carinata HOM05D007386 ORTHO05D009210 9.7e-28 127.5 130 52.3
CsaV3_7G027780 Cucumis sativus L. HOM05D007386 ORTHO05D009210 9.7e-28 127.5 191 47.1
MD03G1260500 Malus domestica HOM05D007386 ORTHO05D009210 1.3e-27 127.1 180 47.8
Aa31LG9G9760 Aethionema arabicum HOM05D000698 ORTHO05D009210 2.2e-27 126.3 131 52.7
AL6G48080 Arabidopsis lyrata HOM05D007386 ORTHO05D009210 1.1e-26 124.0 133 53.4
Carub.0006s3245 Capsella rubella HOM05D007386 ORTHO05D009210 1.1e-26 124.0 133 52.6
AT4G04614 Arabidopsis thaliana HOM05D007386 ORTHO05D009210 2.4e-26 122.9 135 51.9
Thhalv10029017m.g Eutrema salsugineum HOM05D007386 ORTHO05D009210 4.1e-26 122.1 137 51.1
SGA_v2.0_scaffold1G00514 Striga asiatica HOM05D007386 ORTHO05D009210 4.1e-26 122.1 135 57.0
MD11G1280800 Malus domestica HOM05D007386 ORTHO05D009210 5.3e-26 121.7 180 47.8
PSO832G2845 Papaver somniferum HOM05D007386 ORTHO05D009210 5.3e-26 121.7 145 53.8
FAN15G1284 Fragaria x ananassa HOM05D007386 ORTHO05D009210 6.9e-26 121.3 128 59.4
PSO210G0643 Papaver somniferum HOM05D007386 ORTHO05D009210 9.1e-26 120.9 149 53.0
unitig_0.g1138 Utricularia gibba HOM05D007386 ORTHO05D009210 9.1e-26 120.9 128 56.2
Sed0008482 Sechium edule HOM05D007386 ORTHO05D009210 1.5e-25 120.2 179 48.6
Atru.chr5.1489 Acer truncatum HOM05D007386 ORTHO05D009210 3.4e-25 119.0 151 48.3
FvH4_2g23140 Fragaria vesca HOM05D007386 ORTHO05D009210 8.5e-24 114.4 186 47.3
FAN24G1308 Fragaria x ananassa HOM05D007386 ORTHO05D009210 3.2e-23 112.5 182 47.8
SMO351G0424 Selaginella moellendorffii HOM05D007386 ORTHO05D009210 5.2e-21 105.1 125 48.8
Pp3c25_4880 Physcomitrium patens HOM05D007386 ORTHO05D009210 6.7e-21 104.8 141 47.5
RcHm_v2.0_Chr6g0290391 Rosa chinensis HOM05D007386 ORTHO05D009210 4.8e-19 98.6 184 42.4
FAN20G3170 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.1e-18 97.4 130 51.5
Sopen09g027270 Solanum pennellii HOM05D007386 ORTHO05D009210 1.5e-15 87.0 173 41.6
arahy.Tifrunner.gnm1.ann1.90IGTQ Arachis hypogaea HOM05D007386 ORTHO05D009210 1.9e-15 86.7 108 50.0
Os06g0630300 Oryza sativa ssp. japonica HOM05D007386 ORTHO05D009210 5.5e-15 85.1 185 37.8
Solyc09g065510.3 Solanum lycopersicum HOM05D007386 ORTHO05D009210 8.0e-14 81.3 173 41.0
FAN27G1502 Fragaria x ananassa HOM05D007386 ORTHO05D009210 1.4e-13 80.5 132 45.5
CAN.G1105.2 Capsicum annuum HOM05D007386 ORTHO05D009210 6.7e-13 78.2 133 42.1
Mapoly0035s0101 Marchantia polymorpha HOM05D007386 ORTHO05D009210 1.5e-12 77.0 138 39.1
PGSC0003DMG400019353 Solanum tuberosum HOM05D007386 ORTHO05D009210 2.0e-12 76.6 139 41.0
SGA_v2.0_scaffold244G44361 Striga asiatica HOM05D007386 ORTHO05D009210 7.5e-12 74.7 72 61.1
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 9.7e-12 74.3 82 52.4
Cre17.g717700 Chlamydomonas reinhardtii HOM05D007386 ORTHO05D009210 1.7e-08 63.5 132 38.6
arahy.Tifrunner.gnm1.ann1.92TB4L Arachis hypogaea HOM05D007386 ORTHO05D009210 9.4e-07 57.8 78 47.4


User provided reference genes

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