Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 9.2e-119 430.3 220 100.0
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 9.9e-113 410.2 220 94.1
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 6.4e-96 354.4 220 84.1
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 1.5e-84 316.6 221 72.9
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 3.3e-84 315.5 218 74.8
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 1.3e-83 313.5 220 70.5
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.8e-82 309.7 254 65.7
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 1.8e-82 309.7 218 72.0
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 9.0e-82 307.4 220 70.0
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 2.6e-81 305.8 220 70.5
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 2.2e-80 302.8 226 68.1
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.9e-80 302.4 224 69.2
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 3.8e-80 302.0 220 69.5
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.1e-79 300.4 224 69.2
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 1.9e-79 299.7 219 68.9
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 2.5e-79 299.3 220 69.1
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 2.5e-79 299.3 220 68.6
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 3.2e-79 298.9 221 68.8
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 5.5e-79 298.1 220 67.3
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 9.3e-79 297.4 221 69.7
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 9.3e-79 297.4 218 67.0
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 1.6e-78 296.6 217 68.7
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 2.1e-78 296.2 226 68.1
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 3.5e-78 295.4 220 67.7
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 4.6e-78 295.0 220 68.6
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.6e-78 295.0 226 67.7
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 6.0e-78 294.7 220 67.7
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.0e-78 294.7 219 68.9
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 6.0e-78 294.7 224 67.4
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 7.9e-78 294.3 218 68.3
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.3e-77 293.5 218 68.3
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 1.8e-77 293.1 221 66.5
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 1.8e-77 293.1 220 69.1
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.8e-77 293.1 217 67.3
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.3e-77 292.7 218 68.8
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 2.3e-77 292.7 221 68.3
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 2.3e-77 292.7 220 68.2
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 3.0e-77 292.4 218 68.3
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.9e-77 292.0 218 68.8
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 8.7e-77 290.8 221 68.8
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 1.1e-76 290.4 215 67.9
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 1.5e-76 290.0 221 68.3
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 1.9e-76 289.7 217 66.4
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 4.3e-76 288.5 207 70.5
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 5.7e-76 288.1 216 67.1
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 5.7e-76 288.1 218 67.0
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 5.7e-76 288.1 219 67.1
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 9.6e-76 287.3 218 64.2
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 1.3e-75 287.0 220 67.3
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 1.3e-75 287.0 221 67.4
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.6e-75 286.6 218 67.4
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 2.1e-75 286.2 220 67.3
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 2.8e-75 285.8 223 65.5
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 3.7e-75 285.4 249 61.8
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 6.3e-75 284.6 220 64.5
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 8.2e-75 284.3 217 65.4
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 8.2e-75 284.3 220 65.5
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 8.2e-75 284.3 217 67.7
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 1.8e-74 283.1 221 66.5
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 2.4e-74 282.7 219 65.8
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.1e-74 282.3 227 64.8
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 1.2e-73 280.4 226 62.8
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 1.2e-73 280.4 218 64.7
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.5e-73 280.0 220 65.5
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 2.0e-73 279.6 220 66.4
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 2.6e-73 279.3 222 64.4
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 3.4e-73 278.9 220 65.0
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 3.4e-73 278.9 222 64.0
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 3.4e-73 278.9 227 63.0
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 4.5e-73 278.5 220 65.5
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 5.9e-73 278.1 220 62.7
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 5.9e-73 278.1 222 64.0
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 7.6e-73 277.7 221 66.1
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.3e-72 276.9 218 64.7
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.3e-72 276.9 227 64.3
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 1.3e-72 276.9 225 64.4
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.3e-72 276.9 215 66.0
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 2.2e-72 276.2 225 63.1
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 2.2e-72 276.2 264 56.1
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 2.9e-72 275.8 219 62.6
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 2.9e-72 275.8 219 62.6
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 5.0e-72 275.0 212 67.5
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 8.5e-72 274.2 221 65.2
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 1.1e-71 273.9 220 62.7
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.4e-71 273.5 230 62.2
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 4.2e-71 271.9 218 63.8
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 5.5e-71 271.6 220 62.3
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 5.5e-71 271.6 220 62.3
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 9.3e-71 270.8 235 60.0
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 2.1e-70 269.6 226 64.2
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 2.7e-70 269.2 227 61.2
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 3.6e-70 268.9 217 61.3
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 6.1e-70 268.1 220 61.4
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 6.1e-70 268.1 220 61.4
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.3e-69 266.9 221 61.5
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 3.0e-69 265.8 259 57.5
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 6.7e-69 264.6 220 60.0
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 4.3e-68 261.9 231 59.3
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 1.6e-67 260.0 216 61.6
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 3.7e-67 258.8 217 59.0
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 4.8e-67 258.5 221 57.5
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 6.3e-67 258.1 245 55.9
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 8.2e-67 257.7 171 78.4
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 5.3e-66 255.0 215 61.9
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 2.0e-65 253.1 219 58.4
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.6e-65 252.7 205 61.0
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 2.6e-65 252.7 220 56.8
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 6.5e-64 248.1 218 57.8
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 8.5e-64 247.7 181 66.9
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 3.2e-63 245.7 212 61.8
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 3.2e-63 245.7 222 58.6
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 3.2e-63 245.7 225 57.3
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 4.2e-63 245.4 190 67.9
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.7e-62 242.7 161 73.3
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 2.0e-60 236.5 186 64.5
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 5.5e-55 218.4 191 61.3
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 3.9e-53 212.2 217 52.5
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.2e-51 206.5 224 54.0
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 8.5e-48 194.5 123 74.0
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 4.2e-47 192.2 132 66.7
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 4.2e-47 192.2 232 46.6
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 1.2e-46 190.7 251 46.2
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 8.0e-46 188.0 209 49.3
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.5e-44 183.7 235 45.1
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 3.7e-43 179.1 115 71.3
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.2e-30 137.5 100 66.0
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 2.3e-29 133.3 251 34.3
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 3.5e-25 119.4 248 36.3
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 1.2e-22 110.9 182 39.0
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 6.8e-13 78.6 43 83.7
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 9.2e-10 68.2 87 48.3
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.6e-09 67.4 38 81.6
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 4.6e-09 65.9 58 60.3
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 4.3e-07 59.3 42 71.4
QL10p020720 Quercus lobata HOM05D005618 ORTHO05D337099 9.5e-07 58.2 37 78.4
QL10p031514 Quercus lobata HOM05D005618 ORTHO05D337805 2.1e-06 57.0 38 76.3
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 3.6e-06 56.2 207 28.5


User provided reference genes

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