Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030091 Chenopodium quinoa HOM05D000520 ORTHO05D000399 6.6e-95 351.3 267 100.0
AUR62038213 Chenopodium quinoa HOM05D000520 ORTHO05D000399 1.6e-45 187.2 149 79.2
EL10Ac3g06363 Beta vulgaris HOM05D000520 ORTHO05D000399 6.1e-40 168.7 455 42.9
Hund12193 Selenicereus undatus HOM05D000520 ORTHO05D000399 5.9e-11 72.4 151 37.1
Nn1g02168 Nelumbo nucifera HOM05D000520 ORTHO05D000399 1.0e-10 71.6 139 40.3
Cfa015585 Carpinus fangiana HOM05D000520 ORTHO05D000399 6.5e-10 68.9 156 38.5
MD16G1184300 Malus domestica HOM05D000520 ORTHO05D000399 8.5e-10 68.6 153 40.5
Haze_00959 Corylus avellana HOM05D000520 ORTHO05D000399 1.9e-09 67.4 158 45.6
Prupe.1G151700 Prunus persica HOM05D000520 ORTHO05D000399 3.2e-09 66.6 158 44.9
TAR365G1251 Trochodendron aralioides HOM05D000520 ORTHO05D000399 3.2e-09 66.6 142 47.2
Manes.15G023400 Manihot esculenta HOM05D000520 ORTHO05D000399 9.4e-09 65.1 155 45.8
Dinv40265 Davidia involucrata HOM05D000520 ORTHO05D000399 8.0e-08 62.0 123 39.8
Sed0010325 Sechium edule HOM05D000520 ORTHO05D000399 8.0e-08 62.0 117 40.2
TAR633G0222 Trochodendron aralioides HOM05D002055 ORTHO05D002120 1.4e-07 61.2 157 37.6
Duzib212G0287 Durio zibethinus HOM05D000520 ORTHO05D000399 4.0e-07 59.7 170 44.7
Glyma.07G257300 Glycine max HOM05D000520 ORTHO05D000399 4.0e-07 59.7 162 42.0
PGR004G1850 Punica granatum HOM05D000520 ORTHO05D000399 4.0e-07 59.7 144 50.0
Nn4g26198 Nelumbo nucifera HOM05D000520 ORTHO05D000399 6.8e-07 58.9 140 60.0
Glyma.17G016800 Glycine max HOM05D000520 ORTHO05D000399 8.8e-07 58.5 165 41.8
Hma1.2p1_1037F.1_g250580 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.2e-06 58.2 155 41.3
Hma1.2p1_1362F.1_g278200 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.5e-06 57.8 168 36.3
FAN17G1094 Fragaria x ananassa HOM05D000520 ORTHO05D000399 2.0e-06 57.4 159 39.6
Actinidia23612 Actinidia chinensis HOM05D000520 ORTHO05D000399 2.6e-06 57.0 126 38.1
Cpa.g.sc16.22 Carica papaya HOM05D000520 ORTHO05D000399 3.4e-06 56.6 145 44.8
Dinv44482 Davidia involucrata HOM05D000520 ORTHO05D000399 5.7e-06 55.8 163 48.5
Manes.09G164500 Manihot esculenta HOM05D000520 ORTHO05D000399 5.7e-06 55.8 104 41.3
arahy.Tifrunner.gnm1.ann1.J3K1ST Arachis hypogaea HOM05D000520 ORTHO05D000399 7.5e-06 55.5 153 39.2
arahy.Tifrunner.gnm1.ann1.KQD4NT Arachis hypogaea HOM05D000520 ORTHO05D000399 9.8e-06 55.1 150 38.0
COL.COLO4_21650 Corchorus olitorius HOM05D000520 ORTHO05D000399 9.8e-06 55.1 172 51.7
FAN22G0660 Fragaria x ananassa HOM05D000520 ORTHO05D000399 9.8e-06 55.1 158 36.1
Manes.08G122800 Manihot esculenta HOM05D000520 ORTHO05D000399 9.8e-06 55.1 128 38.3
TAR362G0969 Trochodendron aralioides HOM05D000520 ORTHO05D000399 9.8e-06 55.1 99 40.4


User provided reference genes

Program Settings