Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62030075 Chenopodium quinoa HOM05D010117 ORTHO05D012431 2.4e-71 271.9 126 100.0
AUR62030073 Chenopodium quinoa HOM05D010117 ORTHO05D012431 1.1e-63 246.5 124 91.9
AUR62018582 Chenopodium quinoa HOM05D010117 ORTHO05D012431 8.6e-61 236.9 124 87.1
AUR62020837 Chenopodium quinoa HOM05D010117 ORTHO05D012431 7.0e-55 217.2 119 84.0
AUR62038226 Chenopodium quinoa HOM05D010117 ORTHO05D012431 6.2e-27 124.4 63 88.9
Ah.06g182680 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.9e-20 102.8 115 47.0
Ah.06g182760 Amaranthus hybridus HOM05D010117 ORTHO05D012431 4.8e-19 98.2 113 44.2
Ah.06g182670 Amaranthus hybridus HOM05D010117 ORTHO05D012431 8.1e-19 97.4 115 44.3
Ah.06g182660 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.1e-18 97.1 112 45.5
Ah.06g182690 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.4e-18 96.7 117 43.6
Ah.06g182710 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.8e-18 96.3 119 45.4
Ah.06g182720 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.8e-18 96.3 112 42.0
Ah.06g182750 Amaranthus hybridus HOM05D010117 ORTHO05D012431 1.8e-18 96.3 116 44.0
Ah.06g182700 Amaranthus hybridus HOM05D010117 ORTHO05D012431 6.9e-18 94.4 117 46.2
Ah.06g182780 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.0e-17 92.8 111 47.7
Ah.06g182790 Amaranthus hybridus HOM05D010117 ORTHO05D012431 2.6e-17 92.4 111 44.1
AUR62020403 Chenopodium quinoa HOM05D010117 ORTHO05D012431 7.9e-14 80.9 120 40.0
AUR62010299 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.1e-10 68.9 113 35.4
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.3e-10 68.2 112 37.5
Cfa007042 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.6e-09 65.9 120 31.7
Peaxi162Scf00300g00317 Petunia axillaris HOM05D000151 ORTHO05D000074 2.6e-09 65.9 113 31.0
Haze_03688 Corylus avellana HOM05D002155 ORTHO05D002215 4.5e-09 65.1 128 32.0
Eucgr.I01472 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.5e-09 65.1 111 34.2
Haze_03686 Corylus avellana HOM05D000151 ORTHO05D000074 5.8e-09 64.7 117 33.3
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 7.6e-09 64.3 106 36.8
Haze_21630 Corylus avellana HOM05D000151 ORTHO05D000074 9.9e-09 63.9 120 35.0
GSVIVG01023970001 Vitis vinifera HOM05D000151 ORTHO05D000074 1.3e-08 63.5 107 36.4
Actinidia20542 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.8e-08 62.0 112 34.8
Eucgr.I01467 Eucalyptus grandis HOM05D000151 ORTHO05D000074 4.9e-08 61.6 110 33.6
Peaxi162Scf00300g00316 Petunia axillaris HOM05D000151 ORTHO05D000074 4.9e-08 61.6 110 32.7
Hma1.2p1_0032F.1_g018990 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.4e-08 61.2 119 35.3
Prupe.7G176500 Prunus persica HOM05D000151 ORTHO05D000074 6.4e-08 61.2 120 31.7
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 8.4e-08 60.8 106 34.9
PGSC0003DMG400018632 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.4e-08 60.8 107 29.9
Nn5g30875 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.1e-07 60.5 119 33.6
Nitab4.5_0003679g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.1e-07 60.5 112 34.8
Potri.005G105200 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.1e-07 60.5 118 32.2
FvH4_2g15930 Fragaria vesca HOM05D000151 ORTHO05D000074 1.4e-07 60.1 116 36.2
Nitab4.5_0003603g0140 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.4e-07 60.1 109 31.2
Dinv08540 Davidia involucrata HOM05D000151 ORTHO05D000074 1.9e-07 59.7 117 31.6
Haze_21631 Corylus avellana HOM05D000151 ORTHO05D000074 2.4e-07 59.3 123 31.7
Peaxi162Scf00300g00049 Petunia axillaris HOM05D000151 ORTHO05D000074 2.4e-07 59.3 113 31.9
Sabra09G0108800 Salix brachista HOM05D000151 ORTHO05D000074 3.2e-07 58.9 110 30.9
THA.LOC104819663 Tarenaya hassleriana HOM05D000151 ORTHO05D000074 3.2e-07 58.9 111 31.5
Solyc11g005160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.2e-07 58.5 117 29.1
Cfa007044 Carpinus fangiana HOM05D000151 ORTHO05D000074 5.5e-07 58.2 117 33.3
AT2G17030 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 7.1e-07 57.8 111 32.4
CANSAT25G1224 Cannabis sativa HOM05D000151 ORTHO05D000074 7.1e-07 57.8 106 33.0
AUR62012982 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.1e-07 57.8 107 33.6
Eucgr.I01474 Eucalyptus grandis HOM05D000151 ORTHO05D000074 7.1e-07 57.8 109 33.9
FAN24G3248 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.1e-07 57.8 110 37.3
Ah.06g182740 Amaranthus hybridus HOM05D010117 ORTHO05D012431 9.3e-07 57.4 48 47.9
QL06p052420 Quercus lobata HOM05D000151 ORTHO05D000074 9.3e-07 57.4 135 32.6
QL11p052366 Quercus lobata HOM05D000151 ORTHO05D000074 9.3e-07 57.4 106 29.2
PGSC0003DMG400006059 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.3e-07 57.4 107 32.7
Ah.01g023390 Amaranthus hybridus HOM05D000151 ORTHO05D000074 1.2e-06 57.0 110 34.5
QL11p053223 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-06 57.0 106 29.2
Rhsim11G0195100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.2e-06 57.0 122 32.8
MSTRG.19960 Avicennia marina HOM05D000151 ORTHO05D000074 1.6e-06 56.6 107 34.6
Gorai.012G157200 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.6e-06 56.6 111 33.3
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.6e-06 56.6 118 33.1
PGSC0003DMG400006040 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-06 56.6 110 31.8
vmacro02302 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 2.1e-06 56.2 113 30.1
FAN20G3023 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.5e-06 55.5 109 36.7
Gohir.A04G132412 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.5e-06 55.5 111 33.3
Gohir.D04G169200 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.5e-06 55.5 111 33.3
Gohir.D04G169400 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.5e-06 55.5 111 33.3
Gorai.012G157500 Gossypium raimondii HOM05D000151 ORTHO05D000074 3.5e-06 55.5 111 33.3
Sp3g30320 Schrenkiella parvula HOM05D000151 ORTHO05D000074 3.5e-06 55.5 111 29.7
Aqoxy6G01889 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.6e-06 55.1 126 31.0
AL3G49820 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 4.6e-06 55.1 112 31.2
Lj2A488T12 Lonicera japonica HOM05D000151 ORTHO05D000074 4.6e-06 55.1 112 33.0
Peaxi162Scf00442g00626 Petunia axillaris HOM05D000151 ORTHO05D000074 4.6e-06 55.1 113 31.0
Potri.001G277400 Populus trichocarpa HOM05D000151 ORTHO05D000074 6.0e-06 54.7 113 34.5


User provided reference genes

Program Settings