Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 3.6e-222 774.6 394 100.0
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 1.8e-189 666.0 351 96.0
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 4.6e-153 545.0 349 80.2
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 5.1e-128 461.8 365 65.8
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.4e-125 453.8 352 64.8
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 1.4e-114 417.2 339 62.2
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 6.1e-113 411.8 360 58.6
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 8.8e-112 407.9 352 59.1
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 3.3e-111 406.0 341 60.4
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 6.1e-105 385.2 345 56.5
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.2e-104 382.1 353 56.4
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 3.3e-103 379.4 334 56.9
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 5.7e-103 378.6 353 55.8
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 9.7e-103 377.9 375 54.1
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.7e-103 377.9 325 58.2
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 4.8e-102 375.6 319 61.4
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 4.8e-102 375.6 331 58.9
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.1e-101 374.4 362 55.2
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.4e-101 374.0 359 54.9
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.8e-101 373.6 321 57.9
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 2.4e-101 373.2 319 59.9
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 3.1e-101 372.9 333 57.1
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 9.1e-101 371.3 358 55.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 9.1e-101 371.3 302 61.9
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.6e-100 370.5 304 60.5
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 3.5e-100 369.4 359 54.3
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 5.9e-100 368.6 359 54.6
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 7.7e-100 368.2 297 62.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.0e-99 367.9 320 58.4
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 2.9e-99 366.3 322 57.1
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.8e-99 365.9 329 57.8
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.5e-99 364.8 346 55.2
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.5e-98 364.0 348 54.9
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 1.5e-98 364.0 359 54.3
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.9e-98 363.6 347 54.5
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 2.5e-98 363.2 360 54.4
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 3.2e-98 362.8 357 52.7
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 5.5e-98 362.1 348 53.4
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 7.2e-98 361.7 346 54.6
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 7.2e-98 361.7 330 57.3
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 2.1e-97 360.1 345 55.4
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 8.0e-97 358.2 333 56.5
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 2.6e-95 353.2 347 54.5
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 7.5e-95 351.7 323 56.3
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 7.5e-95 351.7 342 55.0
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 1.7e-94 350.5 319 57.1
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 2.2e-94 350.1 322 55.6
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.4e-93 347.4 308 55.8
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.8e-93 347.1 324 54.9
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.8e-93 347.1 319 56.7
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 3.1e-93 346.3 300 56.0
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 3.1e-93 346.3 313 57.2
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 9.1e-93 344.7 324 54.9
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 2.7e-92 343.2 318 55.3
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.5e-92 342.8 323 54.8
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 4.5e-92 342.4 334 54.2
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 6.5e-91 338.6 268 61.9
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 3.2e-90 336.3 295 57.3
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 3.6e-89 332.8 321 49.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 6.1e-89 332.0 328 53.0
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.6e-87 326.6 344 49.7
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 1.7e-86 323.9 299 55.2
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 2.7e-84 316.6 362 48.9
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 5.9e-84 315.5 326 50.6
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 7.7e-84 315.1 309 55.0
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 3.8e-83 312.8 327 51.7
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 8.6e-83 311.6 327 51.7
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 8.6e-83 311.6 327 51.7
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.5e-82 310.8 327 51.1
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 1.9e-82 310.5 314 51.6
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 7.2e-82 308.5 356 47.5
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 3.6e-81 306.2 327 49.2
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 4.7e-81 305.8 324 50.3
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 1.0e-80 304.7 328 50.3
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 5.2e-80 302.4 326 49.1
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 2.0e-79 300.4 326 48.8
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 9.8e-79 298.1 306 50.0
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 1.7e-78 297.4 312 48.7
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 2.7e-76 290.0 343 44.9
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 3.3e-74 283.1 342 45.3
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 5.6e-74 282.3 279 56.3
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.4e-72 277.7 297 48.8
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.8e-72 277.3 297 48.8
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.6e-71 273.5 335 43.0
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 2.6e-71 273.5 335 43.0
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 2.0e-68 263.8 310 43.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.7e-68 263.5 309 46.6
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.7e-68 263.5 309 46.3
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 9.5e-66 255.0 325 44.0
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 2.0e-63 247.3 245 52.7
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 6.6e-59 232.3 296 43.9
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.9e-50 204.1 302 38.4
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 1.5e-42 177.9 306 37.6
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 5.3e-40 169.5 204 43.1
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 1.7e-38 164.5 305 32.8
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 6.6e-35 152.5 248 35.5
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 4.8e-33 146.4 131 55.7
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.5e-26 124.8 129 46.5
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 1.1e-24 118.6 124 52.4
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 1.0e-19 102.1 73 61.6
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 2.9e-14 84.0 329 24.6
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 2.5e-13 80.9 45 86.7
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 1.2e-12 78.6 97 43.3
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 5.1e-11 73.2 84 41.7
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.7e-09 67.0 76 52.6
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 2.6e-07 60.8 44 65.9


User provided reference genes

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