Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.3e-213 746.1 377 100.0
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 6.3e-160 567.8 378 76.5
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 8.9e-154 547.4 373 75.9
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 4.6e-142 508.4 263 95.8
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 2.1e-118 429.9 375 58.7
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 1.7e-117 426.8 366 59.6
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 5.3e-114 415.2 369 58.5
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 1.5e-113 413.7 369 56.6
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 5.8e-113 411.8 377 58.6
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 9.9e-113 411.0 371 57.1
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 1.3e-112 410.6 372 56.2
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 5.4e-111 405.2 378 54.5
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 5.4e-111 405.2 376 55.3
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.1e-110 403.3 369 57.7
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 6.0e-110 401.7 366 56.3
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.7e-109 400.2 353 57.8
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 1.1e-108 397.5 367 56.1
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 4.3e-108 395.6 296 64.2
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 7.4e-108 394.8 370 55.9
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 9.6e-108 394.4 370 54.1
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 1.6e-107 393.7 372 56.5
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 2.8e-107 392.9 366 56.0
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 8.1e-107 391.3 344 56.1
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 1.4e-106 390.6 375 55.5
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 2.4e-106 389.8 321 60.1
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 3.1e-106 389.4 373 55.5
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 4.0e-106 389.0 298 62.8
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 1.2e-105 387.5 374 54.0
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 1.5e-105 387.1 295 63.1
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 2.0e-105 386.7 330 58.2
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 9.9e-105 384.4 324 58.6
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 2.9e-104 382.9 330 55.5
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 2.9e-104 382.9 324 59.0
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 2.9e-104 382.9 324 59.0
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 3.8e-104 382.5 387 54.0
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 3.8e-104 382.5 309 60.5
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 8.4e-104 381.3 292 63.0
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 1.9e-103 380.2 376 54.0
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 1.9e-103 380.2 377 54.1
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 7.1e-103 378.3 298 61.1
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 9.3e-103 377.9 367 53.1
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 4.6e-102 375.6 294 61.6
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 1.8e-101 373.6 298 60.7
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 1.8e-101 373.6 342 55.0
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.3e-101 373.2 295 62.7
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 3.9e-101 372.5 370 54.1
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 5.1e-101 372.1 295 61.7
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 8.7e-101 371.3 366 53.0
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 1.5e-100 370.5 304 61.5
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 1.5e-100 370.5 350 52.0
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 1.9e-100 370.2 367 52.6
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 2.5e-100 369.8 309 58.9
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 9.6e-100 367.9 366 52.2
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 1.3e-99 367.5 373 53.9
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 2.8e-99 366.3 373 54.2
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 3.7e-99 365.9 350 52.0
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 1.8e-98 363.6 344 55.2
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 9.0e-98 361.3 351 54.4
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 3.4e-97 359.4 291 60.5
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 4.5e-97 359.0 301 59.1
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 4.9e-96 355.5 386 51.0
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 6.5e-96 355.1 372 50.3
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 1.1e-95 354.4 312 57.4
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 1.4e-95 354.0 386 50.5
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 4.2e-95 352.4 283 62.2
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 9.3e-95 351.3 380 49.5
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 2.7e-94 349.7 373 52.8
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 6.0e-94 348.6 365 52.9
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 1.0e-93 347.8 309 57.6
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.3e-93 347.4 365 52.6
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 2.3e-93 346.7 299 58.9
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 2.3e-93 346.7 347 51.9
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 3.9e-93 345.9 295 56.9
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 5.1e-93 345.5 311 57.9
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 6.7e-93 345.1 324 54.3
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 4.3e-92 342.4 304 54.3
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 7.4e-92 341.7 282 59.2
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 9.6e-92 341.3 316 55.7
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 1.1e-90 337.8 264 61.7
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.8e-90 337.0 331 52.3
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.8e-90 337.0 331 52.3
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.2e-89 334.3 289 56.4
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 4.5e-89 332.4 369 49.6
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 1.3e-88 330.9 374 46.3
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 3.8e-88 329.3 329 50.8
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 6.5e-88 328.6 363 51.2
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 1.1e-87 327.8 303 56.1
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 4.3e-84 315.8 291 57.0
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 3.7e-83 312.8 318 50.3
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 6.3e-83 312.0 294 52.4
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 1.4e-79 300.8 364 47.3
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 5.5e-79 298.9 323 47.7
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 1.4e-74 284.3 293 50.2
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 1.9e-71 273.9 238 58.4
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 5.5e-71 272.3 291 48.8
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 5.7e-68 262.3 288 47.9
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 2.2e-67 260.4 315 47.3
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 2.4e-66 256.9 313 43.8
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 4.1e-66 256.1 333 42.9
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 1.1e-63 248.1 228 53.9
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 6.5e-56 222.2 296 43.6
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 3.2e-55 219.9 214 53.3
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 4.2e-55 219.5 298 43.6
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 9.4e-55 218.4 374 38.0
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 1.2e-54 218.0 296 43.2
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 3.4e-52 209.9 211 52.1
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 5.7e-52 209.1 242 50.0
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 3.7e-51 206.5 253 47.8
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 3.5e-49 199.9 181 57.5
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 2.9e-48 196.8 290 43.1
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 1.2e-46 191.4 206 49.0
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.0e-45 188.3 290 40.0
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 6.3e-43 179.1 254 42.5
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 6.6e-40 169.1 112 67.9
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 4.3e-39 166.4 288 37.5
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 5.6e-39 166.0 106 68.9
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 1.2e-36 158.3 110 64.5
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 2.0e-33 147.5 166 46.4
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 4.6e-33 146.4 120 54.2
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 1.5e-28 131.3 172 45.3
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 3.7e-27 126.7 135 51.9
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 3.9e-24 116.7 177 37.9
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 3.3e-23 113.6 134 44.8
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 8.9e-21 105.5 123 42.3
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 2.0e-20 104.4 53 86.8
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.6e-20 104.0 66 65.2
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 9.8e-20 102.1 64 68.8
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 2.4e-18 97.4 63 65.1
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 2.1e-17 94.4 56 67.9
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 2.1e-17 94.4 72 59.7
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 3.9e-16 90.1 70 60.0
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 3.3e-15 87.0 69 52.2
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 1.6e-14 84.7 53 66.0
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 4.4e-12 76.6 71 52.1
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 2.1e-09 67.8 107 36.4


User provided reference genes

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