Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.2e-260 901.7 457 100.0
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.6e-240 835.1 457 93.2
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 7.9e-181 637.5 434 75.3
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.1e-118 431.0 464 52.8
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 4.3e-118 429.1 433 56.8
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 7.3e-118 428.3 459 53.2
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 1.2e-115 421.0 441 52.8
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.5e-115 420.6 437 54.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 4.4e-115 419.1 465 52.3
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.2e-114 416.8 459 52.5
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.7e-114 416.0 417 55.2
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.0e-112 410.2 447 53.2
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.7e-112 409.8 434 54.4
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.5e-112 409.5 418 54.3
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 4.6e-112 409.1 450 50.9
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 3.0e-111 406.4 446 53.1
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 3.9e-111 406.0 459 51.4
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 6.6e-111 405.2 443 49.4
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 3.3e-110 402.9 450 53.3
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 3.3e-110 402.9 458 52.2
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 7.3e-110 401.7 436 52.1
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 3.6e-109 399.4 448 50.9
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 3.6e-109 399.4 393 52.9
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 8.1e-109 398.3 469 50.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.1e-108 397.9 449 51.4
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 1.4e-108 397.5 462 51.5
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.8e-108 397.1 434 52.5
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 3.1e-108 396.4 454 50.9
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.2e-107 394.4 464 50.9
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 2.0e-107 393.7 405 52.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 7.5e-107 391.7 400 52.8
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 9.9e-107 391.3 449 50.8
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.9e-106 389.8 529 45.2
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 3.7e-106 389.4 402 51.5
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 3.7e-106 389.4 502 47.8
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.1e-105 387.9 438 51.8
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.4e-105 387.5 452 52.4
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 3.2e-105 386.3 405 53.1
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 4.1e-105 386.0 437 51.0
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.2e-104 384.4 439 52.6
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 1.6e-104 384.0 467 50.3
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.6e-104 384.0 452 52.4
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 1.6e-104 384.0 452 52.4
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 2.1e-104 383.6 395 51.6
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 3.5e-104 382.9 458 50.0
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.1e-102 377.9 443 49.9
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-102 377.5 419 52.0
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.9e-102 377.1 446 51.6
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 4.3e-102 375.9 403 52.1
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 5.6e-102 375.6 393 52.4
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 9.5e-102 374.8 403 52.1
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 8.1e-101 371.7 383 53.0
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.4e-100 370.9 449 49.2
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.4e-100 370.9 395 49.9
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.8e-100 370.5 402 50.5
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 4.0e-100 369.4 388 51.3
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 5.8e-99 365.5 395 52.9
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 9.9e-99 364.8 448 48.9
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.3e-98 364.4 395 49.4
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.3e-98 364.4 439 49.4
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.7e-98 364.0 446 48.0
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.9e-98 363.2 449 48.3
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.9e-98 363.2 435 50.1
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 2.9e-98 363.2 439 49.7
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.9e-98 363.2 454 47.4
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 4.9e-98 362.5 442 49.1
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 2.4e-97 360.1 336 56.2
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.1e-97 358.6 437 49.4
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 9.2e-97 358.2 437 49.4
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.7e-96 356.7 405 50.4
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.0e-95 353.2 443 47.6
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.0e-95 353.2 380 51.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.9e-95 352.8 472 47.0
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.1e-93 347.1 429 46.9
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 4.7e-93 345.9 347 53.9
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-92 344.4 326 53.1
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 2.4e-92 343.6 441 47.8
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 9.0e-92 341.7 388 49.7
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.0e-91 340.5 375 50.9
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 2.6e-91 340.1 388 49.5
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.6e-91 340.1 388 49.7
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 3.4e-91 339.7 388 49.5
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 5.8e-91 339.0 388 49.2
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 5.8e-91 339.0 388 49.2
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 7.6e-91 338.6 455 46.4
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 4.9e-90 335.9 381 51.4
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.1e-89 334.7 382 51.0
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.1e-89 334.7 380 50.5
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 3.2e-89 333.2 382 49.7
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.6e-88 330.9 393 48.3
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.0e-87 326.6 370 50.3
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 3.9e-87 326.2 450 46.2
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 3.9e-87 326.2 414 45.2
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 8.7e-87 325.1 414 45.2
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.6e-85 320.9 381 49.3
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 8.1e-85 318.5 447 45.6
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.8e-84 317.4 349 50.4
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 1.8e-84 317.4 470 41.5
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 4.0e-84 316.2 377 47.5
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.5e-83 314.3 470 44.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 1.5e-83 314.3 366 48.9
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 2.9e-82 310.1 374 49.5
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 6.4e-82 308.9 385 46.8
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 5.4e-81 305.8 298 54.7
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.6e-80 304.3 402 46.5
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.7e-79 298.9 360 48.1
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 3.3e-78 296.6 371 45.0
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.6e-77 294.3 377 46.4
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 4.8e-77 292.7 370 46.8
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 1.4e-76 291.2 414 45.4
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.8e-76 290.8 353 47.6
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 2.4e-76 290.4 365 47.1
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 2.4e-76 290.4 370 46.8
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 5.3e-76 289.3 291 51.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 9.0e-76 288.5 298 51.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 4.5e-75 286.2 369 46.3
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 7.6e-75 285.4 368 46.5
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 7.6e-75 285.4 368 46.5
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.7e-74 284.3 364 44.8
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 6.4e-74 282.3 446 41.5
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 3.5e-72 276.6 375 45.9
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 6.0e-72 275.8 289 48.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 6.0e-72 275.8 279 55.6
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.3e-70 269.6 393 43.3
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.9e-66 256.9 386 42.0
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.9e-66 256.9 251 52.6
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 3.8e-66 256.5 444 41.0
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 8.4e-66 255.4 223 60.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 2.3e-63 247.3 327 43.1
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 9.0e-60 235.3 201 57.7
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.9e-58 230.3 294 49.3
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.1e-57 228.4 197 57.4
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.2e-57 226.5 198 56.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.7e-56 223.8 279 47.0
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 8.8e-55 218.8 308 43.2
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 1.4e-52 211.5 183 59.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 2.3e-47 194.1 155 60.6
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.3e-47 194.1 281 42.7
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.4e-39 168.3 396 34.8
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 4.5e-35 153.3 232 44.8
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 5.5e-33 146.4 250 43.6
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 3.5e-27 127.1 202 37.1
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 4.2e-25 120.2 449 28.5
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 6.8e-23 112.8 135 41.5
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.2e-22 112.1 175 41.7
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 7.0e-20 102.8 313 30.0
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.6e-14 84.3 108 39.8
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 5.9e-11 73.2 61 60.7
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 5.8e-06 56.6 51 51.0


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