Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.5e-62 241.9 119 100.0
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.9e-49 199.1 99 97.0
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 1.5e-43 179.5 99 84.8
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 4.5e-43 177.9 102 83.3
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.3e-42 176.4 99 81.8
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 1.1e-41 173.3 99 79.8
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 1.4e-41 172.9 99 81.8
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.9e-41 172.6 99 79.8
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 1.9e-41 172.6 101 78.2
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 3.2e-41 171.8 99 82.8
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 4.2e-41 171.4 98 82.7
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 5.4e-41 171.0 99 79.8
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 1.6e-40 169.5 99 77.8
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.7e-40 168.7 99 79.8
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 4.6e-40 167.9 99 79.8
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.0e-39 166.8 99 78.8
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.0e-39 166.8 97 81.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 1.0e-39 166.8 102 79.4
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.3e-39 166.4 99 76.8
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.3e-39 166.4 99 77.8
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 2.3e-39 165.6 99 78.8
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 2.3e-39 165.6 99 76.8
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 2.3e-39 165.6 99 75.8
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 3.0e-39 165.2 99 74.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 3.0e-39 165.2 101 76.2
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 3.9e-39 164.9 99 75.8
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 3.9e-39 164.9 98 75.5
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 3.9e-39 164.9 99 74.7
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.1e-39 164.5 99 74.7
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 5.1e-39 164.5 100 79.0
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 5.1e-39 164.5 99 76.8
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 5.1e-39 164.5 101 77.2
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 5.1e-39 164.5 99 77.8
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 5.1e-39 164.5 99 77.8
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 5.1e-39 164.5 99 77.8
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 5.1e-39 164.5 98 76.5
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 6.7e-39 164.1 99 76.8
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 6.7e-39 164.1 99 76.8
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.1e-38 163.3 99 74.7
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.9e-38 162.5 99 76.8
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 2.5e-38 162.2 99 76.8
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 2.5e-38 162.2 98 75.5
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 3.3e-38 161.8 99 75.8
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 4.3e-38 161.4 95 74.7
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 7.4e-38 160.6 99 71.7
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 9.6e-38 160.2 99 72.7
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 9.6e-38 160.2 99 73.7
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.3e-37 159.8 98 75.5
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.3e-37 159.8 100 71.0
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 1.3e-37 159.8 101 71.3
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.6e-37 159.5 97 75.3
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 2.1e-37 159.1 98 75.5
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 2.1e-37 159.1 99 74.7
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 2.1e-37 159.1 98 75.5
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 2.1e-37 159.1 98 75.5
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 2.1e-37 159.1 100 72.0
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 4.8e-37 157.9 101 71.3
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.4e-36 155.6 99 70.7
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 2.4e-36 155.6 98 70.4
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 5.3e-36 154.5 99 71.7
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 5.3e-36 154.5 99 69.7
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 5.3e-36 154.5 99 69.7
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 6.9e-36 154.1 95 70.5
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.9e-36 154.1 95 70.5
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 6.9e-36 154.1 95 70.5
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 6.9e-36 154.1 100 69.0
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 1.2e-35 153.3 100 73.0
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.6e-35 152.1 100 70.0
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 2.6e-35 152.1 116 64.7
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-35 152.1 95 70.5
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 3.4e-35 151.8 99 71.7
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 4.5e-35 151.4 99 68.7
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.0e-34 150.2 100 68.0
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 1.3e-34 149.8 98 72.4
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 2.2e-34 149.1 100 69.0
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 2.9e-34 148.7 100 67.0
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.8e-34 148.3 95 69.5
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 4.9e-34 147.9 100 67.0
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 8.4e-34 147.1 99 68.7
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 8.4e-34 147.1 99 68.7
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.1e-33 146.7 99 67.7
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.1e-33 146.7 88 80.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 2.5e-33 145.6 106 64.2
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 2.5e-33 145.6 100 67.0
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 2.5e-33 145.6 101 69.3
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.2e-33 144.8 88 79.5
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 5.5e-33 144.4 99 64.6
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 7.1e-33 144.1 99 66.7
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 7.1e-33 144.1 99 66.7
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 7.1e-33 144.1 88 79.5
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 4.6e-32 141.4 130 56.2
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 1.1e-30 136.7 104 66.3
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 1.0e-26 123.6 91 64.8
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 4.2e-25 118.2 98 56.1
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.7e-24 115.5 64 78.1
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.0e-23 112.1 63 81.0
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 8.2e-21 104.0 98 50.0
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 2.7e-16 89.0 94 46.8
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 3.9e-15 85.1 97 47.4
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 8.5e-10 67.4 103 35.9
Cre17.g714900 Chlamydomonas reinhardtii HOM05D007115 ORTHO05D008923 3.0e-07 58.9 114 31.6


User provided reference genes

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