Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 6.5e-188 660.6 343 100.0
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 8.4e-127 457.6 345 74.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.6e-93 347.1 356 60.1
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.3e-82 310.8 349 55.6
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 1.7e-82 310.5 334 57.8
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 3.1e-73 279.6 343 53.4
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 1.2e-72 277.7 359 52.4
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 2.5e-70 270.0 348 53.4
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 1.4e-68 264.2 350 52.0
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 4.0e-68 262.7 359 52.4
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 1.2e-67 261.2 355 50.7
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 2.2e-66 256.9 353 51.0
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 4.8e-66 255.8 348 49.1
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 1.4e-65 254.2 345 50.7
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 1.4e-65 254.2 357 51.0
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 1.6e-64 250.8 351 47.9
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 3.5e-64 249.6 334 51.5
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 4.5e-64 249.2 366 47.8
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 4.5e-64 249.2 377 48.3
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 5.9e-64 248.8 345 49.0
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 1.0e-63 248.1 357 49.0
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 1.7e-63 247.3 351 51.3
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.3e-63 246.9 358 49.4
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 2.3e-63 246.9 355 51.0
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 6.6e-63 245.4 345 50.4
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 3.3e-62 243.0 351 49.3
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 3.3e-62 243.0 347 49.9
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 1.6e-61 240.7 347 49.3
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.6e-61 240.7 366 48.1
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 1.6e-61 240.7 364 48.6
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 2.1e-61 240.4 355 49.0
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 2.8e-61 240.0 347 49.3
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 3.6e-61 239.6 354 48.6
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 1.4e-60 237.7 366 49.2
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 1.8e-60 237.3 357 47.1
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 1.8e-60 237.3 360 46.1
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.8e-60 237.3 349 49.0
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 2.3e-60 236.9 356 49.7
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 3.0e-60 236.5 347 48.1
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 4.0e-60 236.1 353 47.9
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 1.5e-59 234.2 344 50.3
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 5.7e-59 232.3 348 46.3
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 1.3e-58 231.1 363 45.7
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-58 231.1 347 48.1
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.3e-58 231.1 353 48.7
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.8e-58 229.9 366 48.1
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.8e-58 229.9 349 46.7
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 3.7e-58 229.6 356 46.3
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 8.3e-58 228.4 343 47.5
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.8e-57 227.3 352 48.0
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.8e-57 227.3 342 48.0
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 2.4e-57 226.9 352 48.0
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 3.2e-57 226.5 324 49.7
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 3.2e-57 226.5 343 47.2
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 1.2e-56 224.6 342 48.8
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.2e-56 224.6 350 46.3
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 2.0e-56 223.8 350 46.0
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 2.7e-56 223.4 330 49.4
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 1.0e-55 221.5 374 45.5
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.7e-55 220.7 372 43.0
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 3.9e-55 219.5 350 46.9
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 3.9e-55 219.5 354 47.5
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 5.0e-55 219.2 357 48.5
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 8.6e-55 218.4 346 45.7
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 8.6e-55 218.4 350 47.7
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 8.6e-55 218.4 345 47.8
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.1e-54 218.0 358 45.8
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 1.5e-54 217.6 353 48.2
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 1.9e-54 217.2 351 47.9
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 2.5e-54 216.9 361 46.8
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 4.3e-54 216.1 349 44.4
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 7.3e-54 215.3 333 47.7
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.8e-53 213.4 358 45.3
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 3.6e-53 213.0 345 44.3
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 4.7e-53 212.6 348 46.0
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 8.0e-53 211.8 348 46.8
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 1.4e-52 211.1 318 50.6
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.4e-52 211.1 325 47.4
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 4.0e-52 209.5 343 46.6
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 8.9e-52 208.4 352 45.2
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 2.0e-51 207.2 346 47.1
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.6e-51 206.8 347 46.1
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 3.4e-51 206.5 334 47.0
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 5.8e-51 205.7 335 44.5
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.8e-51 204.9 353 45.6
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.7e-50 204.1 311 46.6
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 2.2e-50 203.8 360 45.0
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 2.9e-50 203.4 349 47.6
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.9e-50 202.6 360 44.2
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 1.9e-49 200.7 342 44.4
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 3.2e-49 199.9 367 43.6
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 9.2e-49 198.4 340 43.5
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 1.3e-47 194.5 342 45.3
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 3.0e-47 193.4 345 44.1
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 3.9e-47 193.0 337 43.9
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 8.6e-47 191.8 317 47.0
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.9e-46 190.7 392 41.3
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.3e-46 189.9 293 46.1
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 4.3e-46 189.5 391 41.2
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.4e-44 184.5 354 40.1
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 2.3e-44 183.7 347 42.7
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 4.0e-44 183.0 348 42.8
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 1.5e-43 181.0 347 40.9
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 2.6e-43 180.3 334 41.3
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 3.4e-43 179.9 346 42.2
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.4e-43 179.9 315 43.8
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 9.8e-43 178.3 298 46.0
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.7e-42 177.6 351 40.7
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 2.9e-42 176.8 349 42.1
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 2.9e-42 176.8 339 39.2
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 4.9e-42 176.0 339 40.7
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.4e-42 175.6 315 42.9
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 8.3e-42 175.3 355 40.3
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 7.1e-41 172.2 348 42.0
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 9.2e-41 171.8 346 41.6
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.5e-40 169.9 347 41.8
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 3.5e-40 169.9 343 39.1
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 7.8e-40 168.7 348 41.7
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.0e-39 168.3 338 38.2
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 3.9e-39 166.4 338 39.6
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 1.5e-38 164.5 307 44.0
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 2.5e-38 163.7 341 39.3
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 5.6e-38 162.5 348 40.5
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 7.3e-38 162.2 357 41.5
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 7.3e-38 162.2 351 38.5
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 2.8e-37 160.2 234 47.4
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.1e-36 158.3 349 40.7
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 8.9e-36 155.2 341 37.2
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 2.6e-35 153.7 152 62.5
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 3.4e-35 153.3 349 36.7
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 9.9e-35 151.8 353 39.4
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 1.9e-33 147.5 337 34.7
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 3.2e-33 146.7 342 35.7
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 3.2e-33 146.7 333 36.6
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 5.4e-33 146.0 307 38.4
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 9.2e-33 145.2 297 38.4
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 9.2e-33 145.2 356 33.7
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 9.2e-33 145.2 356 33.7
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 9.2e-33 145.2 319 39.2
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 6.0e-32 142.5 335 39.1
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 7.8e-32 142.1 336 34.5
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 1.1e-30 138.3 315 39.0
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 1.6e-29 134.4 315 38.7
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 8.1e-29 132.1 205 46.3
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 1.8e-28 131.0 227 43.6
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 3.1e-28 130.2 265 41.9
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 5.8e-27 125.9 303 36.3
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 2.2e-26 124.0 307 36.8
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.9e-25 120.9 273 39.9
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 2.4e-25 120.6 265 38.1
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 7.1e-25 119.0 294 36.7
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.0e-23 115.2 199 41.7
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 1.0e-23 115.2 294 36.1
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 3.3e-22 110.2 189 42.9
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 4.8e-21 106.3 192 44.3
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 1.5e-19 101.3 100 68.0
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 2.6e-19 100.5 192 40.6
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 7.6e-19 99.0 310 32.6
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 1.3e-18 98.2 187 39.6
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 1.3e-18 98.2 220 37.7
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 1.3e-18 98.2 187 39.6
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.2e-18 97.4 334 33.2
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.2e-18 97.4 334 33.2
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 4.9e-18 96.3 244 35.7
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 2.3e-15 87.4 313 32.3
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 3.0e-15 87.0 350 29.4
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 2.1e-13 80.9 195 38.5
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 4.8e-13 79.7 153 42.5
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 2.6e-11 73.9 219 35.6
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 2.2e-10 70.9 403 27.3
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.4e-09 68.2 93 52.7
Nn1g06616 Nelumbo nucifera HOM05D003676 ORTHO05D004262 3.2e-09 67.0 115 43.5
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 3.2e-09 67.0 337 24.9
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 5.4e-09 66.2 322 30.1
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 5.4e-09 66.2 108 44.4
Pp3c2_17070 Physcomitrium patens HOM05D032375 ORTHO05D030105 4.6e-08 63.2 96 41.7
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 5.6e-06 56.2 52 59.6


User provided reference genes

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