Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 2.2e-61 238.8 122 100.0
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.9e-36 156.0 81 97.5
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.5e-25 119.8 64 96.9
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 1.3e-24 116.7 73 83.6
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 2.8e-16 89.0 61 68.9
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 1.7e-13 79.7 61 63.9
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 8.4e-13 77.4 83 47.0
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 3.5e-11 72.0 83 45.8
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 7.9e-11 70.9 67 58.2
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 1.0e-10 70.5 72 48.6
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.8e-10 69.7 81 50.6
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.8e-10 69.7 81 50.6
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 1.8e-10 69.7 74 47.3
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 2.3e-10 69.3 54 59.3
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 3.9e-10 68.6 60 56.7
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 8.7e-10 67.4 91 48.4
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 1.5e-09 66.6 66 53.0
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 1.9e-09 66.2 79 45.6
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 2.5e-09 65.9 55 58.2
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 3.3e-09 65.5 62 53.2
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 3.3e-09 65.5 60 56.7
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 5.6e-09 64.7 81 50.6
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 9.6e-09 63.9 62 54.8
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 9.6e-09 63.9 60 58.3
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 9.6e-09 63.9 66 53.0
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 9.6e-09 63.9 77 42.9
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 1.6e-08 63.2 62 53.2
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 2.1e-08 62.8 68 48.5
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 2.1e-08 62.8 49 61.2
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 2.8e-08 62.4 62 53.2
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 3.7e-08 62.0 55 54.5
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 3.7e-08 62.0 59 54.2
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 3.7e-08 62.0 66 51.5
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 3.7e-08 62.0 58 53.4
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 4.8e-08 61.6 55 52.7
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 4.8e-08 61.6 73 52.1
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 6.2e-08 61.2 68 47.1
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 8.1e-08 60.8 89 40.4
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 1.1e-07 60.5 66 50.0
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 1.4e-07 60.1 44 65.9
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 1.4e-07 60.1 45 62.2
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 1.4e-07 60.1 62 54.8
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 1.4e-07 60.1 56 55.4
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 1.4e-07 60.1 55 52.7
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 1.8e-07 59.7 49 55.1
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 1.8e-07 59.7 62 51.6
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 3.1e-07 58.9 48 58.3
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 3.1e-07 58.9 60 50.0
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 5.3e-07 58.2 59 52.5
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 6.9e-07 57.8 59 50.8
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 6.9e-07 57.8 79 43.0
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 9.0e-07 57.4 59 49.2
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 1.5e-06 56.6 48 60.4
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 1.5e-06 56.6 67 44.8
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 1.5e-06 56.6 67 44.8
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 1.5e-06 56.6 59 49.2
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 1.5e-06 56.6 59 49.2
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 2.0e-06 56.2 62 51.6
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.0e-06 56.2 47 55.3
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 2.6e-06 55.8 66 47.0
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 3.4e-06 55.5 60 51.7
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 3.4e-06 55.5 66 48.5
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 3.4e-06 55.5 60 46.7
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 4.5e-06 55.1 48 50.0
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 5.8e-06 54.7 67 43.3
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 5.8e-06 54.7 67 43.3
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 7.6e-06 54.3 54 51.9
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 7.6e-06 54.3 66 47.0
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 7.6e-06 54.3 66 47.0
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 1.0e-05 53.9 44 59.1
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 1.0e-05 53.9 48 47.9


User provided reference genes

Program Settings