Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 4.0e-209 731.5 450 100.0
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 3.7e-167 592.0 375 94.1
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 1.3e-119 434.1 623 53.3
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 1.5e-94 350.9 428 53.3
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 4.1e-81 306.2 423 50.1
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.0e-80 303.9 422 48.6
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 1.1e-78 298.1 425 46.4
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 1.9e-78 297.4 429 47.1
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 5.5e-78 295.8 419 45.1
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 1.4e-76 291.2 421 46.8
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 2.3e-76 290.4 430 44.7
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 2.6e-75 287.0 419 43.2
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 8.3e-74 282.0 416 45.9
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 8.3e-74 282.0 418 51.0
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 4.1e-73 279.6 423 45.2
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 1.2e-72 278.1 404 47.0
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 1.6e-72 277.7 421 46.6
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 2.7e-72 276.9 439 45.1
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 2.3e-71 273.9 417 48.2
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 1.1e-70 271.6 436 46.3
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 4.3e-70 269.6 423 45.2
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.2e-69 268.1 452 41.6
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 1.2e-67 261.5 439 42.1
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 1.5e-67 261.2 421 43.0
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 3.4e-67 260.0 464 41.8
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 5.8e-67 259.2 423 46.6
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.7e-66 257.7 537 39.1
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 2.2e-66 257.3 405 42.0
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 4.9e-66 256.1 383 47.3
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.1e-65 255.0 334 45.2
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 1.4e-65 254.6 448 39.7
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 3.2e-65 253.4 440 41.4
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 3.2e-65 253.4 420 40.7
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 5.4e-65 252.7 499 42.3
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 5.4e-65 252.7 439 41.9
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 7.0e-65 252.3 425 39.3
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 9.2e-65 251.9 421 42.8
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 1.2e-64 251.5 427 38.2
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 2.7e-64 250.4 429 38.7
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 7.8e-64 248.8 423 44.0
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.0e-63 248.4 433 41.1
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 1.3e-63 248.1 414 47.6
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.7e-63 247.7 423 43.7
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 2.3e-63 247.3 443 41.3
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 8.6e-63 245.4 432 38.0
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 1.5e-62 244.6 414 47.3
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 1.9e-62 244.2 365 41.6
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 1.2e-61 241.5 358 48.9
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 1.2e-61 241.5 471 41.6
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 2.1e-61 240.7 443 38.8
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 2.8e-61 240.4 414 42.5
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 6.2e-61 239.2 418 38.0
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 6.2e-61 239.2 437 37.1
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 8.0e-61 238.8 414 44.4
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 8.0e-61 238.8 308 56.5
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 8.0e-61 238.8 553 37.6
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 3.1e-60 236.9 417 42.2
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 4.0e-60 236.5 465 41.1
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 4.0e-60 236.5 354 45.8
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 5.2e-60 236.1 413 41.9
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 1.5e-59 234.6 404 44.3
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 2.0e-59 234.2 452 41.8
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 3.4e-59 233.4 407 42.8
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 5.8e-59 232.6 451 43.2
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 9.8e-59 231.9 443 41.8
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 2.2e-58 230.7 456 41.2
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 2.2e-58 230.7 421 43.0
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 2.9e-58 230.3 460 40.7
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 3.7e-58 229.9 421 42.8
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 4.9e-58 229.6 420 40.2
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 4.9e-58 229.6 447 40.7
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 4.9e-58 229.6 405 39.5
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.9e-57 227.6 463 40.6
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 3.2e-57 226.9 444 41.0
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 5.4e-57 226.1 436 36.5
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 7.1e-57 225.7 339 46.3
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 2.7e-56 223.8 442 37.6
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 6.0e-56 222.6 414 41.8
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 7.8e-56 222.2 314 49.7
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 3.0e-55 220.3 400 43.5
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 5.1e-55 219.5 445 38.7
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 1.5e-54 218.0 587 32.9
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 5.6e-54 216.1 412 46.1
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 5.6e-54 216.1 634 32.0
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 1.2e-53 214.9 435 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 6.2e-53 212.6 437 44.4
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 6.2e-53 212.6 416 45.0
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 1.1e-52 211.8 412 45.1
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 1.4e-52 211.5 412 45.6
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.4e-52 211.5 413 45.3
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 3.1e-52 210.3 414 45.4
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 6.8e-52 209.1 413 45.0
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 5.8e-51 206.1 449 39.2
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.9e-50 203.0 390 43.1
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.9e-50 203.0 475 38.1
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 1.9e-49 201.1 408 43.6
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 2.4e-49 200.7 414 37.2
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.2e-49 200.3 419 38.2
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 7.1e-49 199.1 429 39.6
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 4.6e-48 196.4 393 42.7
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 7.8e-48 195.7 363 40.8
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 6.6e-47 192.6 285 45.3
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.3e-46 189.9 414 36.7
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 4.3e-46 189.9 389 41.6
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 9.6e-46 188.7 676 30.9
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 2.4e-44 184.1 406 37.4
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 3.5e-40 170.2 413 37.0
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.3e-39 168.3 269 44.6
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 6.9e-36 156.0 380 36.1
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 3.4e-35 153.7 200 43.0
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 2.4e-33 147.5 271 38.4
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 1.9e-30 137.9 355 38.9
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 4.3e-30 136.7 184 47.8
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.6e-29 134.8 214 40.7
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 9.3e-25 119.0 380 34.7
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 9.3e-25 119.0 317 30.0
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 8.1e-21 105.9 448 32.8
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 2.6e-19 100.9 188 40.4
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 2.9e-18 97.4 112 50.9
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 1.4e-17 95.1 348 33.0
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 7.1e-17 92.8 152 41.4
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 1.2e-16 92.0 155 41.9
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 5.3e-12 76.6 282 29.4
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.7e-10 71.6 200 35.0
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 4.2e-09 67.0 131 43.5
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.0e-07 62.4 431 30.4
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 1.8e-07 61.6 337 31.8
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 8.7e-07 59.3 51 60.8
AagrBONN_evm.TU.Sc2ySwM_228.4909 Anthoceros agrestis HOM05D005724 ORTHO05D006636 4.3e-06 57.0 68 48.5


User provided reference genes

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