Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 4.3e-81 304.7 162 100.0
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.7e-50 201.1 137 83.9
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.4e-31 140.2 137 59.9
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 8.8e-26 120.9 134 52.2
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 6.3e-24 114.8 139 48.9
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 2.0e-22 109.8 137 47.4
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 2.2e-21 106.3 137 51.8
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.0e-21 105.1 132 54.5
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.5e-20 103.6 116 51.7
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.9e-20 103.2 151 44.4
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.5e-20 102.8 137 45.3
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 5.5e-20 101.7 136 44.9
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 7.2e-20 101.3 116 51.7
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 9.4e-20 100.9 125 48.8
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.2e-19 100.5 123 48.8
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.2e-19 100.5 140 40.7
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.2e-19 100.5 140 40.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.2e-19 100.5 151 45.7
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.6e-19 100.1 115 48.7
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.1e-19 99.8 139 41.0
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 2.7e-19 99.4 121 50.4
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 3.6e-19 99.0 115 49.6
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 4.7e-19 98.6 115 49.6
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 4.7e-19 98.6 115 46.1
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 6.1e-19 98.2 116 48.3
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 8.0e-19 97.8 115 48.7
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.0e-18 97.4 116 48.3
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.0e-18 97.4 152 44.1
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 1.4e-18 97.1 152 42.1
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.4e-18 97.1 116 48.3
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 4.0e-18 95.5 102 54.9
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 6.8e-18 94.7 116 47.4
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.8e-18 94.7 116 47.4
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 6.8e-18 94.7 113 44.2
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 1.5e-17 93.6 116 45.7
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 2.0e-17 93.2 116 46.6
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 2.6e-17 92.8 116 44.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 4.4e-17 92.0 106 48.1
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 4.4e-17 92.0 139 42.4
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 5.7e-17 91.7 131 43.5
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 5.7e-17 91.7 122 42.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.7e-17 91.7 116 45.7
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 9.8e-17 90.9 154 39.0
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 1.3e-16 90.5 116 46.6
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.7e-16 90.1 131 42.7
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.7e-16 90.1 116 46.6
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.8e-16 89.4 120 43.3
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 3.7e-16 89.0 123 46.3
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 3.7e-16 89.0 116 46.6
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 6.3e-16 88.2 119 42.9
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.1e-15 87.4 137 44.5
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.1e-15 87.4 109 45.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.1e-15 87.4 102 49.0
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.1e-15 87.4 130 42.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 1.1e-15 87.4 103 46.6
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.4e-15 87.0 137 43.8
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 1.4e-15 87.0 133 37.6
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 1.8e-15 86.7 115 41.7
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 3.1e-15 85.9 104 51.0
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.1e-15 85.5 119 44.5
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 5.4e-15 85.1 115 46.1
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 5.4e-15 85.1 125 40.0
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 5.4e-15 85.1 117 41.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 7.0e-15 84.7 115 45.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 9.1e-15 84.3 112 42.0
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.0e-14 83.2 154 39.6
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.0e-14 83.2 154 39.6
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.0e-14 83.2 154 39.6
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 2.0e-14 83.2 110 44.5
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.7e-14 82.8 154 39.6
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.7e-14 82.8 154 39.6
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 3.5e-14 82.4 109 45.9
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 5.9e-14 81.6 155 37.4
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 7.7e-14 81.3 154 39.0
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 7.7e-14 81.3 116 40.5
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.7e-13 80.1 133 38.3
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 6.5e-13 78.2 135 36.3
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 1.5e-12 77.0 115 40.0
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 1.5e-12 77.0 101 46.5
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 1.9e-12 76.6 114 42.1
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.5e-12 76.3 104 41.3
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 4.2e-12 75.5 104 41.3
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 4.2e-12 75.5 101 44.6
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 5.5e-12 75.1 120 42.5
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 7.2e-12 74.7 113 42.5
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 9.5e-12 74.3 117 41.0
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.7e-11 72.8 101 42.6
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 8.0e-11 71.2 92 42.4
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 1.5e-09 67.0 109 37.6
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 7.5e-09 64.7 112 35.7
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 2.8e-08 62.8 110 38.2
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 1.4e-07 60.5 84 42.9
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 2.4e-07 59.7 103 43.7
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 2.0e-06 56.6 104 35.6
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 3.5e-06 55.8 113 32.7
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 3.5e-06 55.8 111 33.3


User provided reference genes

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