Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 8.7e-87 323.6 158 100.0
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.3e-86 321.2 158 98.7
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 6.5e-66 254.2 154 81.8
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.6e-64 249.6 193 67.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 9.7e-62 240.4 157 73.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 8.0e-56 220.7 157 70.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.4e-55 219.9 157 70.7
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 6.7e-55 217.6 156 71.8
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 2.0e-54 216.1 160 70.6
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 2.6e-54 215.7 157 68.2
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 1.3e-53 213.4 162 69.1
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.1e-52 210.3 156 68.6
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 9.1e-52 207.2 161 64.6
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.9e-51 204.5 157 65.0
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 2.9e-50 202.2 158 67.7
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 5.0e-50 201.4 150 66.7
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 6.5e-50 201.1 156 67.9
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.1e-49 200.3 166 63.9
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.1e-49 200.3 156 68.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.1e-49 200.3 158 63.3
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.1e-49 200.3 154 61.7
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.9e-49 199.5 158 65.2
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 2.5e-49 199.1 170 60.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 2.5e-49 199.1 158 64.6
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 3.2e-49 198.7 167 63.5
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 3.2e-49 198.7 152 67.8
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 7.2e-49 197.6 157 64.3
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 7.2e-49 197.6 161 64.0
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 9.4e-49 197.2 154 65.6
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 2.1e-48 196.1 156 61.5
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 2.1e-48 196.1 155 60.6
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.0e-47 193.7 153 65.4
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.4e-47 193.4 169 60.4
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 5.2e-47 191.4 162 62.3
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 5.2e-47 191.4 159 62.3
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.7e-45 186.4 165 60.6
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 2.8e-45 185.7 165 60.6
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 2.8e-45 185.7 170 60.6
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.1e-44 183.7 148 61.5
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 7.0e-44 181.0 153 60.8
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 2.0e-43 179.5 156 57.1
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 2.0e-43 179.5 154 61.0
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 4.5e-43 178.3 155 61.3
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.9e-42 175.6 157 60.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 3.8e-42 175.3 164 57.3
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.0e-42 174.9 202 52.5
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 6.5e-42 174.5 167 58.1
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 8.5e-42 174.1 166 57.8
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.5e-41 173.3 168 57.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 5.5e-41 171.4 151 58.3
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 7.2e-41 171.0 153 56.9
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.2e-40 170.2 156 56.4
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 1.6e-40 169.9 167 54.5
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 2.7e-40 169.1 154 56.5
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 4.7e-40 168.3 152 60.5
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.4e-39 166.8 164 56.7
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 1.8e-39 166.4 161 54.0
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.8e-39 166.4 146 57.5
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 3.0e-39 165.6 159 54.7
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.2e-38 163.7 165 55.2
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.2e-38 163.7 165 56.4
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 1.5e-38 163.3 155 53.5
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 5.7e-38 161.4 151 55.6
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 5.7e-38 161.4 155 52.9
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 2.2e-37 159.5 144 55.6
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 6.3e-37 157.9 126 62.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 1.8e-36 156.4 151 54.3
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 7.7e-35 151.0 157 52.2
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 1.3e-34 150.2 149 53.7
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.7e-34 149.8 153 52.3
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 2.3e-34 149.4 149 54.4
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.3e-34 149.4 152 52.6
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 5.0e-34 148.3 149 53.0
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 5.0e-34 148.3 149 53.0
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 5.0e-34 148.3 149 53.0
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 6.6e-34 147.9 147 53.7
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 6.6e-34 147.9 152 51.3
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 6.6e-34 147.9 152 51.3
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 2.5e-33 146.0 155 53.5
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 3.3e-33 145.6 154 50.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 3.3e-33 145.6 151 54.3
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.8e-32 142.5 160 50.6
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 3.6e-32 142.1 154 52.6
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 6.8e-31 137.9 152 45.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.5e-30 136.7 153 46.4
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 4.4e-30 135.2 153 45.8
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 5.7e-30 134.8 135 54.1
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 2.9e-29 132.5 148 48.6
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 3.2e-28 129.0 138 47.1
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.0e-26 124.0 96 61.5
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.0e-26 122.5 119 56.3
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 8.0e-24 114.4 151 43.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 4.4e-22 108.6 101 57.4
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.2e-21 106.3 91 58.2
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.2e-19 100.5 79 64.6
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 2.0e-19 99.8 130 40.0
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 3.3e-17 92.4 113 50.4
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.2e-16 90.5 86 53.5
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.8e-16 89.4 76 57.9
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 6.2e-16 88.2 111 45.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.7e-10 70.1 46 67.4
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.5e-09 66.2 44 68.2
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 3.4e-06 55.8 36 66.7


User provided reference genes

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