Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029167 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.7e-44 182.2 88 100.0
EL10Ac9g22405 Beta vulgaris HOM05D000004 ORTHO05D000002 1.4e-30 136.0 86 72.1
EL10Ac8g19739 Beta vulgaris HOM05D000004 ORTHO05D000002 3.9e-28 127.9 86 70.9
AUR62005893 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.7e-20 100.5 60 80.0
AUR62005560 Chenopodium quinoa HOM05D000004 ORTHO05D000378 7.4e-19 97.1 62 75.8
Manes.12G101375 Manihot esculenta HOM05D000004 ORTHO05D000002 1.2e-16 89.7 82 53.7
Manes.14G045351 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-16 89.4 82 52.4
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-15 86.3 84 48.8
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-15 86.3 84 48.8
Sopen05g009900 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-15 85.9 83 49.4
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-15 85.5 84 48.8
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-15 85.1 83 49.4
EL10Ac9g20846 Beta vulgaris HOM05D000004 ORTHO05D000002 3.8e-15 84.7 48 79.2
Sopen05g029610 Solanum pennellii HOM05D000004 ORTHO05D000002 3.8e-15 84.7 84 47.6
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-15 84.3 83 49.4
Sopen03g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-15 83.6 84 47.6
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 83.2 84 47.6
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 83.2 84 47.6
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-14 83.2 83 49.4
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-14 82.8 83 49.4
Sopen01g025050 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-14 82.0 83 47.0
Sopen10g017950 Solanum pennellii HOM05D000014 ORTHO05D000016 2.5e-14 82.0 83 47.0
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-14 82.0 81 45.7
Sopen11g019750 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-14 81.6 83 48.2
Sopen01g011390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.2e-14 81.3 83 47.0
Potri.004G014401 Populus trichocarpa HOM05D000004 ORTHO05D000002 5.5e-14 80.9 83 49.4
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-14 80.9 83 48.2
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-14 80.9 83 47.0
Sopen08g005590 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-14 80.5 83 48.2
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-13 78.6 83 50.6
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-13 78.6 83 50.6
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-13 78.6 83 50.6
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-13 78.6 83 50.6
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-13 78.6 78 47.4
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 3.6e-13 78.2 83 49.4
Sopen10g020250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-13 77.8 67 50.7
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-13 77.4 81 42.0
AUR62037853 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.9e-13 77.0 46 78.3
Sopen01g010650 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 83 45.8
Sopen08g011070 Solanum pennellii HOM05D000014 ORTHO05D000016 1.8e-12 75.9 63 50.8
Sopen11g010940 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 83 47.0
Sopen11g014650 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 83 45.8
Sopen12g020530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-12 75.9 83 45.8
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-12 75.5 85 42.4
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 3.0e-12 75.1 65 52.3
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-12 75.1 69 44.9
Sopen09g009570 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-12 73.9 78 46.2
Sopen08g014710 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-11 73.2 82 42.7
Sopen05g016250 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-11 72.4 83 45.8
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-11 72.0 71 50.7
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-11 71.6 60 50.0
Sopen06g005960 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-10 69.7 82 41.5
Sopen08g015300 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-10 69.7 83 42.2
Sopen02g007540 Solanum pennellii HOM05D000691 ORTHO05D000378 3.7e-10 68.2 77 42.9
ATR0739G043 Amborella trichopoda HOM05D000004 ORTHO05D021182 4.8e-10 67.8 82 42.7
AUR62036706 Chenopodium quinoa HOM05D007020 ORTHO05D000002 6.3e-10 67.4 64 48.4
Sopen12g015040 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-10 67.4 76 43.4
Sopen10g020660 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-10 67.0 80 40.0
CSS0004422 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-09 66.2 51 54.9
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.4e-09 66.2 73 39.7
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 1.4e-09 66.2 73 39.7
CsaV3_5G014110 Cucumis sativus L. HOM05D003698 ORTHO05D004320 1.4e-09 66.2 73 39.7
CsaV3_5G018680 Cucumis sativus L. HOM05D000052 ORTHO05D000046 1.4e-09 66.2 73 39.7
CsaV3_UNG167240 Cucumis sativus L. HOM05D011462 ORTHO05D014612 1.4e-09 66.2 73 39.7
CsaV3_UNG167280 Cucumis sativus L. HOM05D013071 ORTHO05D016268 1.4e-09 66.2 73 39.7
Sopen00g001810 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-09 65.1 80 38.8
Sopen01g026700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-09 64.7 80 36.2
Sopen02g003780 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-09 64.7 56 50.0
CSS0034382 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.3e-09 64.3 51 52.9
Sopen07g009500 Solanum pennellii HOM05D001275 ORTHO05D001570 1.2e-08 63.2 80 37.5
CiPaw.04G042200 Carya illinoinensis HOM05D000004 ORTHO05D000002 1.5e-08 62.8 66 42.4
Sopen06g016840 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-08 62.8 80 38.8
AUR62022350 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.0e-08 62.4 66 43.9
Sopen04g014250 Solanum pennellii HOM05D000004 ORTHO05D000378 2.0e-08 62.4 80 37.5
CsaV3_5G023160 Cucumis sativus L. HOM05D001517 ORTHO05D001424 2.6e-08 62.0 73 38.4
Sopen02g007870 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-08 62.0 77 36.4
Sopen00g013620 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-08 61.6 80 36.2
Sopen09g023520 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-08 61.6 80 36.2
PGSC0003DMG400000388 Solanum tuberosum HOM05D000004 ORTHO05D000002 3.4e-08 61.6 79 36.7
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-08 61.2 59 47.5
EL10Ac9g20976 Beta vulgaris HOM05D000004 ORTHO05D000002 5.9e-08 60.8 35 77.1
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.9e-08 60.8 67 38.8
Sopen04g010080 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 60.8 80 35.0
Sopen12g018380 Solanum pennellii HOM05D000691 ORTHO05D000378 5.9e-08 60.8 80 35.0
SEGI_40026 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.7e-08 60.5 65 41.5
Sopen02g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-08 60.5 71 43.7
Manes.15G121750 Manihot esculenta HOM05D000004 ORTHO05D000002 1.0e-07 60.1 76 36.8
Sopen02g006790 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 60.1 78 41.0
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 60.1 71 42.3
CSS0009193 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.3e-07 59.7 48 52.1
SEGI_26900 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.3e-07 59.7 71 40.8
Sopen03g009560 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-07 59.7 80 36.2
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.3 71 40.8
Sopen02g010830 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.3 71 40.8
Sopen05g005120 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.3 71 42.3
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 59.3 71 40.8
ClCG10G007950 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.2e-07 58.9 83 36.1
CsaV3_7G011610 Cucumis sativus L. HOM05D000004 ORTHO05D000002 2.2e-07 58.9 70 37.1
Sopen02g010300 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.9 71 40.8
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.9 71 42.3
Sopen10g014200 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-07 58.9 71 42.3
SEGI_04019 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.8e-07 58.2 52 48.1
SEGI_40029 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.8e-07 58.2 52 48.1
Sopen07g015160 Solanum pennellii HOM05D000691 ORTHO05D000378 3.8e-07 58.2 77 35.1
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 5.0e-07 57.8 80 40.0
Sopen02g009460 Solanum pennellii HOM05D000691 ORTHO05D000378 5.0e-07 57.8 73 42.5
Sopen08g004730 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 57.8 80 33.8
CsaV3_4G010140 Cucumis sativus L. HOM05D000004 ORTHO05D000002 6.5e-07 57.4 66 34.8
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 6.5e-07 57.4 80 33.8
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 1.1e-06 56.6 74 40.5
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 56.6 71 40.8
Sopen05g011340 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-06 55.8 63 41.3
PGSC0003DMG400046184 Solanum tuberosum HOM05D000004 ORTHO05D000002 1.9e-06 55.8 71 38.0
A09p01570 Brassica napus HOM05D000004 ORTHO05D000002 2.5e-06 55.5 68 35.3
CSS0010412 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-06 55.5 51 45.1
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 2.5e-06 55.5 67 31.3
Manes.10G081651 Manihot esculenta HOM05D000004 ORTHO05D000002 3.2e-06 55.1 68 35.3
Sopen10g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 55.1 77 33.8
Sopen10g017900 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-06 55.1 57 43.9
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-06 54.7 70 38.6
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 5.5e-06 54.3 53 43.4
Ah.13g069290 Amaranthus hybridus HOM05D000004 ORTHO05D000002 7.2e-06 53.9 66 36.4
Manes.S035016 Manihot esculenta HOM05D000004 ORTHO05D000002 7.2e-06 53.9 67 35.8
SEGI_22438 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.2e-06 53.9 52 46.2
Sopen02g012460 Solanum pennellii HOM05D000004 ORTHO05D000002 7.2e-06 53.9 71 39.4
Sopen05g027790 Solanum pennellii HOM05D000004 ORTHO05D000378 9.4e-06 53.5 51 45.1


User provided reference genes

Program Settings